EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000004736 (Gene tree)
Gene ID: 105933497
Gene Symbol: rpusd1
Alias: fe26f08|wu:fe26f08|zgc:153465
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 4247 bases
Position: chrKN811408.1:971188-975434
Accession: 105933497
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000023626	PseudoU_synth_2	PF00849.22	7.5e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000009853	-	2172	XM_012873073	ENSFHEP00000023626	307 (aa)	XP_012728527	UPI000644EC38

Gene Model

Click here to download ENSFHEG00000004736's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000004736's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000004736	rpusd1	98	55.410	ENSG00000007376	RPUSD1	99	67.066	Homo_sapiens
ENSFHEG00000004736	rpusd1	100	79.479	ENSAPOG00000022221	rpusd1	99	79.153	Acanthochromis_polyacanthus
ENSFHEG00000004736	rpusd1	98	58.416	ENSAMEG00000007461	RPUSD1	98	58.746	Ailuropoda_melanoleuca
ENSFHEG00000004736	rpusd1	100	80.323	ENSACIG00000015863	rpusd1	100	79.677	Amphilophus_citrinellus
ENSFHEG00000004736	rpusd1	100	80.259	ENSAOCG00000021975	rpusd1	97	79.935	Amphiprion_ocellaris
ENSFHEG00000004736	rpusd1	100	80.583	ENSAPEG00000001316	rpusd1	97	80.259	Amphiprion_percula
ENSFHEG00000004736	rpusd1	100	78.964	ENSATEG00000002984	rpusd1	99	78.964	Anabas_testudineus
ENSFHEG00000004736	rpusd1	77	59.336	ENSAPLG00000012316	RPUSD1	98	57.741	Anas_platyrhynchos
ENSFHEG00000004736	rpusd1	98	62.914	ENSACAG00000008953	RPUSD1	99	61.921	Anolis_carolinensis
ENSFHEG00000004736	rpusd1	98	55.195	ENSANAG00000024709	RPUSD1	98	54.754	Aotus_nancymaae
ENSFHEG00000004736	rpusd1	100	79.421	ENSACLG00000013692	rpusd1	100	79.100	Astatotilapia_calliptera
ENSFHEG00000004736	rpusd1	99	67.763	ENSAMXG00000019802	rpusd1	99	67.105	Astyanax_mexicanus
ENSFHEG00000004736	rpusd1	98	58.416	ENSBTAG00000000179	RPUSD1	98	58.746	Bos_taurus
ENSFHEG00000004736	rpusd1	98	54.545	ENSCJAG00000012253	RPUSD1	98	54.426	Callithrix_jacchus
ENSFHEG00000004736	rpusd1	98	56.436	ENSCAFG00000019614	RPUSD1	98	57.426	Canis_familiaris
ENSFHEG00000004736	rpusd1	98	56.436	ENSCAFG00020008891	RPUSD1	98	57.426	Canis_lupus_dingo
ENSFHEG00000004736	rpusd1	98	59.076	ENSCHIG00000012872	RPUSD1	98	59.406	Capra_hircus
ENSFHEG00000004736	rpusd1	98	54.455	ENSTSYG00000036934	RPUSD1	98	55.116	Carlito_syrichta
ENSFHEG00000004736	rpusd1	98	56.436	ENSCAPG00000014219	RPUSD1	83	62.846	Cavia_aperea
ENSFHEG00000004736	rpusd1	98	56.436	ENSCPOG00000034604	RPUSD1	83	62.846	Cavia_porcellus
ENSFHEG00000004736	rpusd1	98	55.519	ENSCCAG00000034385	RPUSD1	98	55.082	Cebus_capucinus
ENSFHEG00000004736	rpusd1	98	55.410	ENSCATG00000042983	RPUSD1	98	54.754	Cercocebus_atys
ENSFHEG00000004736	rpusd1	98	54.785	ENSCLAG00000013966	RPUSD1	83	62.451	Chinchilla_lanigera
ENSFHEG00000004736	rpusd1	98	55.082	ENSCSAG00000012121	RPUSD1	98	54.426	Chlorocebus_sabaeus
ENSFHEG00000004736	rpusd1	98	61.184	ENSCPBG00000021101	RPUSD1	99	60.596	Chrysemys_picta_bellii
ENSFHEG00000004736	rpusd1	86	60.526	ENSCANG00000028576	RPUSD1	90	62.451	Colobus_angolensis_palliatus
ENSFHEG00000004736	rpusd1	98	56.908	ENSCGRG00001014253	Rpusd1	98	56.908	Cricetulus_griseus_chok1gshd
ENSFHEG00000004736	rpusd1	98	56.908	ENSCGRG00000017995	Rpusd1	98	56.908	Cricetulus_griseus_crigri
ENSFHEG00000004736	rpusd1	99	76.316	ENSCSEG00000018512	rpusd1	99	75.329	Cynoglossus_semilaevis
ENSFHEG00000004736	rpusd1	100	90.554	ENSCVAG00000022746	rpusd1	100	87.622	Cyprinodon_variegatus
ENSFHEG00000004736	rpusd1	98	70.530	ENSDARG00000060192	rpusd1	99	69.205	Danio_rerio
ENSFHEG00000004736	rpusd1	98	54.455	ENSDNOG00000003721	RPUSD1	98	54.426	Dasypus_novemcinctus
ENSFHEG00000004736	rpusd1	98	56.106	ENSDORG00000026656	Rpusd1	98	56.106	Dipodomys_ordii
ENSFHEG00000004736	rpusd1	96	46.945	ENSEBUG00000008767	rpusd1	92	45.981	Eptatretus_burgeri
ENSFHEG00000004736	rpusd1	98	55.663	ENSEASG00005018421	RPUSD1	74	55.340	Equus_asinus_asinus
ENSFHEG00000004736	rpusd1	100	71.429	ENSELUG00000014307	rpusd1	90	71.104	Esox_lucius
ENSFHEG00000004736	rpusd1	98	56.106	ENSFCAG00000010359	RPUSD1	98	56.106	Felis_catus
ENSFHEG00000004736	rpusd1	98	63.934	ENSFALG00000003211	RPUSD1	99	63.907	Ficedula_albicollis
ENSFHEG00000004736	rpusd1	98	55.776	ENSFDAG00000013398	RPUSD1	98	55.776	Fukomys_damarensis
ENSFHEG00000004736	rpusd1	99	71.010	ENSGMOG00000010756	rpusd1	99	70.033	Gadus_morhua
ENSFHEG00000004736	rpusd1	98	63.158	ENSGALG00000005315	RPUSD1	99	62.914	Gallus_gallus
ENSFHEG00000004736	rpusd1	100	89.577	ENSGAFG00000009886	rpusd1	100	86.971	Gambusia_affinis
ENSFHEG00000004736	rpusd1	100	74.757	ENSGACG00000014276	rpusd1	100	77.023	Gasterosteus_aculeatus
ENSFHEG00000004736	rpusd1	98	61.639	ENSGAGG00000004181	RPUSD1	99	60.927	Gopherus_agassizii
ENSFHEG00000004736	rpusd1	98	56.209	ENSGGOG00000013997	RPUSD1	98	56.209	Gorilla_gorilla
ENSFHEG00000004736	rpusd1	100	79.743	ENSHBUG00000023728	rpusd1	100	79.421	Haplochromis_burtoni
ENSFHEG00000004736	rpusd1	98	55.116	ENSHGLG00000002595	RPUSD1	98	55.116	Heterocephalus_glaber_female
ENSFHEG00000004736	rpusd1	98	55.116	ENSHGLG00100014303	RPUSD1	98	55.116	Heterocephalus_glaber_male
ENSFHEG00000004736	rpusd1	99	73.290	ENSHCOG00000002390	rpusd1	99	73.026	Hippocampus_comes
ENSFHEG00000004736	rpusd1	98	67.219	ENSIPUG00000001570	rpusd1	99	65.563	Ictalurus_punctatus
ENSFHEG00000004736	rpusd1	98	55.776	ENSSTOG00000004276	RPUSD1	98	55.776	Ictidomys_tridecemlineatus
ENSFHEG00000004736	rpusd1	98	57.096	ENSJJAG00000015696	Rpusd1	98	55.776	Jaculus_jaculus
ENSFHEG00000004736	rpusd1	99	84.641	ENSKMAG00000017287	rpusd1	99	82.680	Kryptolebias_marmoratus
ENSFHEG00000004736	rpusd1	100	77.023	ENSLBEG00000022502	rpusd1	99	77.346	Labrus_bergylta
ENSFHEG00000004736	rpusd1	100	77.023	ENSLBEG00000013354	RPUSD1	99	77.346	Labrus_bergylta
ENSFHEG00000004736	rpusd1	98	60.927	ENSLACG00000008869	RPUSD1	99	60.927	Latimeria_chalumnae
ENSFHEG00000004736	rpusd1	70	82.243	ENSLOCG00000005682	rpusd1	99	82.243	Lepisosteus_oculatus
ENSFHEG00000004736	rpusd1	98	55.116	ENSLAFG00000002115	RPUSD1	98	55.116	Loxodonta_africana
ENSFHEG00000004736	rpusd1	98	55.410	ENSMFAG00000003961	RPUSD1	98	54.754	Macaca_fascicularis
ENSFHEG00000004736	rpusd1	98	55.410	ENSMMUG00000000842	RPUSD1	98	54.754	Macaca_mulatta
ENSFHEG00000004736	rpusd1	98	55.410	ENSMNEG00000042712	RPUSD1	98	54.754	Macaca_nemestrina
ENSFHEG00000004736	rpusd1	98	55.410	ENSMLEG00000030591	RPUSD1	98	54.754	Mandrillus_leucophaeus
ENSFHEG00000004736	rpusd1	100	81.290	ENSMAMG00000004735	rpusd1	99	80.000	Mastacembelus_armatus
ENSFHEG00000004736	rpusd1	100	79.421	ENSMZEG00005003214	rpusd1	100	79.100	Maylandia_zebra
ENSFHEG00000004736	rpusd1	97	63.123	ENSMGAG00000005447	RPUSD1	98	63.514	Meleagris_gallopavo
ENSFHEG00000004736	rpusd1	82	56.126	ENSMAUG00000019998	Rpusd1	96	56.126	Mesocricetus_auratus
ENSFHEG00000004736	rpusd1	98	54.785	ENSMICG00000017561	RPUSD1	98	54.455	Microcebus_murinus
ENSFHEG00000004736	rpusd1	98	57.426	ENSMOCG00000014082	Rpusd1	98	57.426	Microtus_ochrogaster
ENSFHEG00000004736	rpusd1	99	76.066	ENSMMOG00000012569	rpusd1	99	76.066	Mola_mola
ENSFHEG00000004736	rpusd1	99	60.526	ENSMODG00000016882	RPUSD1	99	60.526	Monodelphis_domestica
ENSFHEG00000004736	rpusd1	100	79.032	ENSMALG00000017818	rpusd1	99	79.032	Monopterus_albus
ENSFHEG00000004736	rpusd1	98	57.426	MGP_CAROLIEiJ_G0021244	Rpusd1	98	57.426	Mus_caroli
ENSFHEG00000004736	rpusd1	98	57.426	ENSMUSG00000041199	Rpusd1	98	57.426	Mus_musculus
ENSFHEG00000004736	rpusd1	98	56.766	MGP_PahariEiJ_G0023562	Rpusd1	98	56.766	Mus_pahari
ENSFHEG00000004736	rpusd1	98	57.426	MGP_SPRETEiJ_G0022155	Rpusd1	98	57.426	Mus_spretus
ENSFHEG00000004736	rpusd1	96	56.040	ENSMPUG00000015897	RPUSD1	96	57.047	Mustela_putorius_furo
ENSFHEG00000004736	rpusd1	98	55.921	ENSMLUG00000001089	RPUSD1	76	67.511	Myotis_lucifugus
ENSFHEG00000004736	rpusd1	98	56.436	ENSNGAG00000003595	Rpusd1	98	56.436	Nannospalax_galili
ENSFHEG00000004736	rpusd1	100	79.805	ENSNBRG00000006457	rpusd1	100	78.827	Neolamprologus_brichardi
ENSFHEG00000004736	rpusd1	54	46.512	ENSNLEG00000008424	-	97	47.337	Nomascus_leucogenys
ENSFHEG00000004736	rpusd1	98	60.927	ENSMEUG00000016049	RPUSD1	98	59.416	Notamacropus_eugenii
ENSFHEG00000004736	rpusd1	98	49.175	ENSOPRG00000008340	RPUSD1	98	49.175	Ochotona_princeps
ENSFHEG00000004736	rpusd1	98	54.785	ENSODEG00000016945	RPUSD1	83	62.055	Octodon_degus
ENSFHEG00000004736	rpusd1	99	79.870	ENSONIG00000015672	rpusd1	100	77.273	Oreochromis_niloticus
ENSFHEG00000004736	rpusd1	100	76.221	ENSORLG00000013009	rpusd1	99	74.919	Oryzias_latipes
ENSFHEG00000004736	rpusd1	100	76.547	ENSORLG00020010382	rpusd1	99	75.244	Oryzias_latipes_hni
ENSFHEG00000004736	rpusd1	100	75.570	ENSORLG00015021354	rpusd1	99	73.941	Oryzias_latipes_hsok
ENSFHEG00000004736	rpusd1	100	76.873	ENSOMEG00000021426	rpusd1	99	75.896	Oryzias_melastigma
ENSFHEG00000004736	rpusd1	98	55.082	ENSOGAG00000003795	RPUSD1	98	55.082	Otolemur_garnettii
ENSFHEG00000004736	rpusd1	98	58.882	ENSOARG00000014254	RPUSD1	98	59.076	Ovis_aries
ENSFHEG00000004736	rpusd1	98	55.738	ENSPPAG00000034797	RPUSD1	98	55.738	Pan_paniscus
ENSFHEG00000004736	rpusd1	98	57.096	ENSPPRG00000012389	RPUSD1	98	56.436	Panthera_pardus
ENSFHEG00000004736	rpusd1	99	57.049	ENSPTIG00000008545	RPUSD1	77	72.277	Panthera_tigris_altaica
ENSFHEG00000004736	rpusd1	98	55.738	ENSPTRG00000007565	RPUSD1	98	55.738	Pan_troglodytes
ENSFHEG00000004736	rpusd1	98	55.410	ENSPANG00000024401	RPUSD1	98	54.754	Papio_anubis
ENSFHEG00000004736	rpusd1	100	68.078	ENSPKIG00000018890	rpusd1	91	66.450	Paramormyrops_kingsleyae
ENSFHEG00000004736	rpusd1	98	63.487	ENSPSIG00000013945	RPUSD1	99	62.583	Pelodiscus_sinensis
ENSFHEG00000004736	rpusd1	100	75.244	ENSPMGG00000014950	rpusd1	99	75.244	Periophthalmus_magnuspinnatus
ENSFHEG00000004736	rpusd1	98	56.436	ENSPEMG00000000497	Rpusd1	98	56.436	Peromyscus_maniculatus_bairdii
ENSFHEG00000004736	rpusd1	99	53.115	ENSPMAG00000001563	rpusd1	99	53.115	Petromyzon_marinus
ENSFHEG00000004736	rpusd1	98	62.171	ENSPCIG00000021216	-	92	61.589	Phascolarctos_cinereus
ENSFHEG00000004736	rpusd1	100	89.902	ENSPFOG00000007946	rpusd1	100	86.971	Poecilia_formosa
ENSFHEG00000004736	rpusd1	100	89.902	ENSPLAG00000011925	rpusd1	100	86.971	Poecilia_latipinna
ENSFHEG00000004736	rpusd1	100	89.902	ENSPMEG00000002910	rpusd1	100	86.971	Poecilia_mexicana
ENSFHEG00000004736	rpusd1	100	90.554	ENSPREG00000019851	rpusd1	100	87.622	Poecilia_reticulata
ENSFHEG00000004736	rpusd1	98	42.810	ENSPCAG00000002258	RPUSD1	98	42.244	Procavia_capensis
ENSFHEG00000004736	rpusd1	98	54.098	ENSPCOG00000022582	RPUSD1	98	55.082	Propithecus_coquereli
ENSFHEG00000004736	rpusd1	98	52.614	ENSPVAG00000013104	RPUSD1	98	51.475	Pteropus_vampyrus
ENSFHEG00000004736	rpusd1	100	79.743	ENSPNYG00000024076	rpusd1	100	79.421	Pundamilia_nyererei
ENSFHEG00000004736	rpusd1	99	67.105	ENSPNAG00000013806	rpusd1	99	66.118	Pygocentrus_nattereri
ENSFHEG00000004736	rpusd1	98	57.756	ENSRNOG00000023639	Rpusd1	98	57.756	Rattus_norvegicus
ENSFHEG00000004736	rpusd1	98	55.738	ENSRBIG00000030238	RPUSD1	98	55.082	Rhinopithecus_bieti
ENSFHEG00000004736	rpusd1	98	55.738	ENSRROG00000036663	RPUSD1	98	55.082	Rhinopithecus_roxellana
ENSFHEG00000004736	rpusd1	98	56.106	ENSSBOG00000033063	RPUSD1	98	56.106	Saimiri_boliviensis_boliviensis
ENSFHEG00000004736	rpusd1	98	61.184	ENSSHAG00000013500	RPUSD1	98	60.596	Sarcophilus_harrisii
ENSFHEG00000004736	rpusd1	98	72.185	ENSSFOG00015014394	rpusd1	99	70.861	Scleropages_formosus
ENSFHEG00000004736	rpusd1	100	79.935	ENSSMAG00000008045	rpusd1	93	79.612	Scophthalmus_maximus
ENSFHEG00000004736	rpusd1	100	80.906	ENSSDUG00000001829	rpusd1	97	79.612	Seriola_dumerili
ENSFHEG00000004736	rpusd1	100	80.906	ENSSLDG00000020853	rpusd1	97	79.612	Seriola_lalandi_dorsalis
ENSFHEG00000004736	rpusd1	53	72.289	ENSSARG00000011187	-	99	72.289	Sorex_araneus
ENSFHEG00000004736	rpusd1	62	58.639	ENSSPUG00000005119	-	98	58.639	Sphenodon_punctatus
ENSFHEG00000004736	rpusd1	100	82.848	ENSSPAG00000012708	rpusd1	99	82.201	Stegastes_partitus
ENSFHEG00000004736	rpusd1	98	56.393	ENSSSCG00000008000	RPUSD1	98	64.173	Sus_scrofa
ENSFHEG00000004736	rpusd1	81	70.161	ENSTGUG00000015375	RPUSD1	98	70.161	Taeniopygia_guttata
ENSFHEG00000004736	rpusd1	100	75.728	ENSTRUG00000003041	rpusd1	99	75.728	Takifugu_rubripes
ENSFHEG00000004736	rpusd1	99	69.079	ENSTNIG00000002660	rpusd1	99	69.079	Tetraodon_nigroviridis
ENSFHEG00000004736	rpusd1	98	57.843	ENSTTRG00000010167	RPUSD1	98	56.393	Tursiops_truncatus
ENSFHEG00000004736	rpusd1	98	56.436	ENSUAMG00000012736	RPUSD1	98	58.086	Ursus_americanus
ENSFHEG00000004736	rpusd1	98	56.436	ENSUMAG00000021174	RPUSD1	98	58.086	Ursus_maritimus
ENSFHEG00000004736	rpusd1	98	56.766	ENSVVUG00000012357	RPUSD1	98	57.756	Vulpes_vulpes
ENSFHEG00000004736	rpusd1	98	62.583	ENSXETG00000007184	rpusd1	98	61.589	Xenopus_tropicalis
ENSFHEG00000004736	rpusd1	100	90.228	ENSXCOG00000017930	rpusd1	100	87.622	Xiphophorus_couchianus
ENSFHEG00000004736	rpusd1	100	90.228	ENSXMAG00000024084	rpusd1	100	87.622	Xiphophorus_maculatus