EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000005230 (Gene tree)
Gene ID: 105932241
Gene Symbol: fubp1
Alias: wu:fa92h11|wu:fb24h11|wu:fc26f06|zgc:66046
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 14184 bases
Position: chrKN811385.1:21-14204
Accession: 105932241
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000023886	KH_1	PF00013.29	1.7e-68	1	4
ENSFHEP00000023886	KH_1	PF00013.29	1.7e-68	2	4
ENSFHEP00000023886	KH_1	PF00013.29	1.7e-68	3	4
ENSFHEP00000023886	KH_1	PF00013.29	1.7e-68	4	4
ENSFHEP00000004232	KH_1	PF00013.29	2e-68	1	4
ENSFHEP00000004232	KH_1	PF00013.29	2e-68	2	4
ENSFHEP00000004232	KH_1	PF00013.29	2e-68	3	4
ENSFHEP00000004232	KH_1	PF00013.29	2e-68	4	4
ENSFHEP00000004209	KH_1	PF00013.29	5.8e-63	1	4
ENSFHEP00000004209	KH_1	PF00013.29	5.8e-63	2	4
ENSFHEP00000004209	KH_1	PF00013.29	5.8e-63	3	4
ENSFHEP00000004209	KH_1	PF00013.29	5.8e-63	4	4
ENSFHEP00000023886	KH_2	PF07650.17	1.2e-20	1	1
ENSFHEP00000004232	KH_2	PF07650.17	1.5e-20	1	1
ENSFHEP00000004209	KH_2	PF07650.17	7.5e-20	1	1
ENSFHEP00000004232	DUF1897	PF09005.10	6.7e-16	1	2
ENSFHEP00000004232	DUF1897	PF09005.10	6.7e-16	2	2
ENSFHEP00000004209	DUF1897	PF09005.10	1.4e-11	1	2
ENSFHEP00000004209	DUF1897	PF09005.10	1.4e-11	2	2
ENSFHEP00000023886	DUF1897	PF09005.10	1.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000009187	-	6829	XM_012871298	ENSFHEP00000004232	654 (aa)	XP_012726752	UPI00064498B6
ENSFHET00000009206	-	6754	XM_012871300	ENSFHEP00000023886	629 (aa)	XP_012726754	UPI000644DB39
ENSFHET00000009234	-	1593	-	ENSFHEP00000004209	530 (aa)	-	-

Gene Model

Click here to download ENSFHEG00000005230's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000005230's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000005230	fubp1	60	30.000	ENSFHEG00000008263	igf2bp2a	65	30.000
ENSFHEG00000005230	fubp1	98	48.752	ENSFHEG00000003957	fubp3	94	46.645
ENSFHEG00000005230	fubp1	50	37.662	ENSFHEG00000018838	-	63	37.662
ENSFHEG00000005230	fubp1	64	41.250	ENSFHEG00000009608	pcbp2	97	41.250
ENSFHEG00000005230	fubp1	57	30.070	ENSFHEG00000006539	-	66	37.333
ENSFHEG00000005230	fubp1	57	33.577	ENSFHEG00000000844	igf2bp1	62	33.577
ENSFHEG00000005230	fubp1	96	53.626	ENSFHEG00000009577	khsrp	97	53.549
ENSFHEG00000005230	fubp1	63	58.156	ENSFHEG00000006558	-	81	58.156
ENSFHEG00000005230	fubp1	60	30.822	ENSFHEG00000015920	igf2bp3	62	32.370

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000005230	fubp1	70	78.587	ENSG00000162613	FUBP1	100	71.233	Homo_sapiens
ENSFHEG00000005230	fubp1	99	88.208	ENSAPOG00000014845	fubp1	98	87.656	Acanthochromis_polyacanthus
ENSFHEG00000005230	fubp1	65	83.036	ENSAMEG00000007372	FUBP1	100	68.971	Ailuropoda_melanoleuca
ENSFHEG00000005230	fubp1	100	87.284	ENSACIG00000020024	fubp1	100	86.342	Amphilophus_citrinellus
ENSFHEG00000005230	fubp1	100	90.205	ENSAPEG00000012232	fubp1	100	88.854	Amphiprion_percula
ENSFHEG00000005230	fubp1	100	95.719	ENSATEG00000018619	fubp1	100	95.719	Anabas_testudineus
ENSFHEG00000005230	fubp1	65	83.333	ENSAPLG00000005965	FUBP1	100	72.623	Anas_platyrhynchos
ENSFHEG00000005230	fubp1	65	83.036	ENSACAG00000006310	FUBP1	96	68.940	Anolis_carolinensis
ENSFHEG00000005230	fubp1	100	94.495	ENSACLG00000006708	fubp1	100	94.190	Astatotilapia_calliptera
ENSFHEG00000005230	fubp1	87	84.505	ENSAMXG00000005525	fubp1	99	83.708	Astyanax_mexicanus
ENSFHEG00000005230	fubp1	70	78.808	ENSCJAG00000007062	FUBP1	100	71.626	Callithrix_jacchus
ENSFHEG00000005230	fubp1	70	78.384	ENSCAFG00000020361	FUBP1	100	71.385	Canis_familiaris
ENSFHEG00000005230	fubp1	65	85.106	ENSTSYG00000000148	FUBP1	100	71.799	Carlito_syrichta
ENSFHEG00000005230	fubp1	65	81.893	ENSCAPG00000011052	-	65	84.677	Cavia_aperea
ENSFHEG00000005230	fubp1	70	78.384	ENSCPOG00000002757	FUBP1	98	71.472	Cavia_porcellus
ENSFHEG00000005230	fubp1	91	64.000	ENSCCAG00000036537	FUBP1	100	64.571	Cebus_capucinus
ENSFHEG00000005230	fubp1	70	78.166	ENSCATG00000042126	FUBP1	100	71.233	Cercocebus_atys
ENSFHEG00000005230	fubp1	74	83.036	ENSCLAG00000005621	FUBP1	100	72.152	Chinchilla_lanigera
ENSFHEG00000005230	fubp1	70	78.166	ENSCSAG00000001402	FUBP1	100	71.233	Chlorocebus_sabaeus
ENSFHEG00000005230	fubp1	70	78.166	ENSCHOG00000008177	FUBP1	98	71.494	Choloepus_hoffmanni
ENSFHEG00000005230	fubp1	70	80.134	ENSCGRG00001007103	Fubp1	100	71.756	Cricetulus_griseus_chok1gshd
ENSFHEG00000005230	fubp1	65	83.036	ENSCGRG00000003372	Fubp1	100	71.613	Cricetulus_griseus_crigri
ENSFHEG00000005230	fubp1	100	93.641	ENSCSEG00000021412	fubp1	98	93.005	Cynoglossus_semilaevis
ENSFHEG00000005230	fubp1	99	98.466	ENSCVAG00000014487	fubp1	99	98.466	Cyprinodon_variegatus
ENSFHEG00000005230	fubp1	100	80.989	ENSDARG00000029248	fubp1	100	82.912	Danio_rerio
ENSFHEG00000005230	fubp1	82	53.571	ENSDNOG00000034565	-	83	49.438	Dasypus_novemcinctus
ENSFHEG00000005230	fubp1	70	78.384	ENSDORG00000016534	Fubp1	98	71.341	Dipodomys_ordii
ENSFHEG00000005230	fubp1	73	82.988	ENSETEG00000000948	-	53	78.947	Echinops_telfairi
ENSFHEG00000005230	fubp1	75	72.727	ENSEBUG00000016143	fubp1	63	65.574	Eptatretus_burgeri
ENSFHEG00000005230	fubp1	72	82.432	ENSEEUG00000001287	FUBP1	87	65.517	Erinaceus_europaeus
ENSFHEG00000005230	fubp1	100	84.688	ENSELUG00000007990	fubp1	100	84.962	Esox_lucius
ENSFHEG00000005230	fubp1	70	79.379	ENSFALG00000005768	FUBP1	97	72.222	Ficedula_albicollis
ENSFHEG00000005230	fubp1	70	78.166	ENSFDAG00000014210	FUBP1	100	70.270	Fukomys_damarensis
ENSFHEG00000005230	fubp1	100	84.409	ENSGMOG00000003370	fubp1	100	83.780	Gadus_morhua
ENSFHEG00000005230	fubp1	70	79.867	ENSGALG00000008939	FUBP1	100	72.965	Gallus_gallus
ENSFHEG00000005230	fubp1	100	96.692	ENSGAFG00000020972	fubp1	100	96.692	Gambusia_affinis
ENSFHEG00000005230	fubp1	100	90.610	ENSGACG00000016563	fubp1	100	89.984	Gasterosteus_aculeatus
ENSFHEG00000005230	fubp1	100	95.107	ENSHBUG00000009835	fubp1	100	94.495	Haplochromis_burtoni
ENSFHEG00000005230	fubp1	70	78.384	ENSHGLG00000008415	-	100	72.152	Heterocephalus_glaber_female
ENSFHEG00000005230	fubp1	72	73.650	ENSHGLG00000002808	-	100	60.947	Heterocephalus_glaber_female
ENSFHEG00000005230	fubp1	70	78.384	ENSHGLG00100003417	-	100	71.061	Heterocephalus_glaber_male
ENSFHEG00000005230	fubp1	72	74.510	ENSHGLG00100001414	-	100	61.538	Heterocephalus_glaber_male
ENSFHEG00000005230	fubp1	100	90.543	ENSHCOG00000000910	fubp1	100	91.343	Hippocampus_comes
ENSFHEG00000005230	fubp1	100	83.333	ENSIPUG00000009896	fubp1	100	83.636	Ictalurus_punctatus
ENSFHEG00000005230	fubp1	70	78.971	ENSSTOG00000014312	FUBP1	100	71.385	Ictidomys_tridecemlineatus
ENSFHEG00000005230	fubp1	70	79.018	ENSJJAG00000020069	Fubp1	100	71.450	Jaculus_jaculus
ENSFHEG00000005230	fubp1	100	96.195	ENSKMAG00000018897	fubp1	100	96.195	Kryptolebias_marmoratus
ENSFHEG00000005230	fubp1	99	92.239	ENSLBEG00000012700	fubp1	97	92.388	Labrus_bergylta
ENSFHEG00000005230	fubp1	97	80.723	ENSLOCG00000003745	fubp1	99	79.736	Lepisosteus_oculatus
ENSFHEG00000005230	fubp1	74	83.036	ENSLAFG00000003273	FUBP1	99	72.679	Loxodonta_africana
ENSFHEG00000005230	fubp1	70	78.587	ENSMFAG00000031825	FUBP1	100	71.472	Macaca_fascicularis
ENSFHEG00000005230	fubp1	70	78.747	ENSMMUG00000002899	FUBP1	100	71.233	Macaca_mulatta
ENSFHEG00000005230	fubp1	70	78.166	ENSMNEG00000045212	FUBP1	100	71.233	Macaca_nemestrina
ENSFHEG00000005230	fubp1	99	93.213	ENSMAMG00000007489	fubp1	99	92.609	Mastacembelus_armatus
ENSFHEG00000005230	fubp1	100	94.954	ENSMZEG00005024298	fubp1	100	94.343	Maylandia_zebra
ENSFHEG00000005230	fubp1	65	83.383	ENSMGAG00000009424	FUBP1	100	72.920	Meleagris_gallopavo
ENSFHEG00000005230	fubp1	70	78.603	ENSMAUG00000016428	Fubp1	98	71.472	Mesocricetus_auratus
ENSFHEG00000005230	fubp1	70	79.075	ENSMOCG00000014751	Fubp1	100	71.672	Microtus_ochrogaster
ENSFHEG00000005230	fubp1	87	90.710	ENSMMOG00000019463	fubp1	99	89.800	Mola_mola
ENSFHEG00000005230	fubp1	67	72.870	ENSMODG00000020804	FUBP1	100	67.030	Monodelphis_domestica
ENSFHEG00000005230	fubp1	100	94.954	ENSMALG00000015173	fubp1	100	94.343	Monopterus_albus
ENSFHEG00000005230	fubp1	70	79.510	MGP_CAROLIEiJ_G0025740	Fubp1	99	76.145	Mus_caroli
ENSFHEG00000005230	fubp1	70	79.287	ENSMUSG00000028034	Fubp1	99	75.954	Mus_musculus
ENSFHEG00000005230	fubp1	70	79.333	MGP_PahariEiJ_G0027191	Fubp1	99	76.000	Mus_pahari
ENSFHEG00000005230	fubp1	70	79.510	MGP_SPRETEiJ_G0026693	Fubp1	99	76.145	Mus_spretus
ENSFHEG00000005230	fubp1	65	82.789	ENSMLUG00000014802	FUBP1	100	68.814	Myotis_lucifugus
ENSFHEG00000005230	fubp1	65	83.036	ENSNGAG00000014302	Fubp1	100	69.160	Nannospalax_galili
ENSFHEG00000005230	fubp1	100	89.984	ENSNBRG00000015099	fubp1	100	90.143	Neolamprologus_brichardi
ENSFHEG00000005230	fubp1	70	74.123	ENSNLEG00000009772	FUBP1	100	70.076	Nomascus_leucogenys
ENSFHEG00000005230	fubp1	85	83.824	ENSMEUG00000007917	-	59	84.314	Notamacropus_eugenii
ENSFHEG00000005230	fubp1	89	70.487	ENSOPRG00000001175	FUBP1	98	61.162	Ochotona_princeps
ENSFHEG00000005230	fubp1	70	78.384	ENSODEG00000002600	-	100	70.270	Octodon_degus
ENSFHEG00000005230	fubp1	99	53.543	ENSODEG00000003657	-	99	51.343	Octodon_degus
ENSFHEG00000005230	fubp1	99	95.092	ENSONIG00000018381	fubp1	99	93.671	Oreochromis_niloticus
ENSFHEG00000005230	fubp1	65	83.036	ENSOANG00000009777	FUBP1	99	70.598	Ornithorhynchus_anatinus
ENSFHEG00000005230	fubp1	99	88.357	ENSORLG00000003540	fubp1	99	88.836	Oryzias_latipes
ENSFHEG00000005230	fubp1	100	93.313	ENSORLG00020005908	fubp1	96	93.313	Oryzias_latipes_hni
ENSFHEG00000005230	fubp1	100	93.475	ENSORLG00015008779	fubp1	100	92.587	Oryzias_latipes_hsok
ENSFHEG00000005230	fubp1	100	93.455	ENSOMEG00000021943	fubp1	97	93.760	Oryzias_melastigma
ENSFHEG00000005230	fubp1	65	82.544	ENSOGAG00000014233	FUBP1	100	68.713	Otolemur_garnettii
ENSFHEG00000005230	fubp1	70	78.808	ENSOARG00000013259	FUBP1	100	72.808	Ovis_aries
ENSFHEG00000005230	fubp1	70	78.384	ENSPPRG00000000413	FUBP1	100	71.385	Panthera_pardus
ENSFHEG00000005230	fubp1	70	78.384	ENSPTIG00000019450	FUBP1	100	71.385	Panthera_tigris_altaica
ENSFHEG00000005230	fubp1	65	82.738	ENSPSIG00000012965	FUBP1	100	71.567	Pelodiscus_sinensis
ENSFHEG00000005230	fubp1	99	83.386	ENSPMGG00000009060	fubp1	99	82.288	Periophthalmus_magnuspinnatus
ENSFHEG00000005230	fubp1	70	79.470	ENSPEMG00000021802	Fubp1	100	70.270	Peromyscus_maniculatus_bairdii
ENSFHEG00000005230	fubp1	59	59.825	ENSPMAG00000001644	-	93	59.389	Petromyzon_marinus
ENSFHEG00000005230	fubp1	100	99.083	ENSPFOG00000000238	fubp1	100	99.083	Poecilia_formosa
ENSFHEG00000005230	fubp1	100	96.942	ENSPLAG00000021170	fubp1	100	96.942	Poecilia_latipinna
ENSFHEG00000005230	fubp1	99	91.930	ENSPMEG00000004747	fubp1	99	98.997	Poecilia_mexicana
ENSFHEG00000005230	fubp1	100	98.930	ENSPREG00000017911	fubp1	100	98.930	Poecilia_reticulata
ENSFHEG00000005230	fubp1	72	78.017	ENSPPYG00000001219	-	68	79.157	Pongo_abelii
ENSFHEG00000005230	fubp1	70	78.337	ENSPCAG00000012617	FUBP1	98	71.298	Procavia_capensis
ENSFHEG00000005230	fubp1	70	78.714	ENSPCOG00000024974	FUBP1	100	71.385	Propithecus_coquereli
ENSFHEG00000005230	fubp1	70	72.271	ENSPVAG00000014637	FUBP1	98	67.378	Pteropus_vampyrus
ENSFHEG00000005230	fubp1	100	94.954	ENSPNYG00000004552	fubp1	100	94.343	Pundamilia_nyererei
ENSFHEG00000005230	fubp1	100	85.801	ENSPNAG00000016207	fubp1	100	85.650	Pygocentrus_nattereri
ENSFHEG00000005230	fubp1	70	79.510	ENSRNOG00000043370	Fubp1	100	71.889	Rattus_norvegicus
ENSFHEG00000005230	fubp1	70	78.166	ENSRBIG00000042950	FUBP1	100	71.233	Rhinopithecus_bieti
ENSFHEG00000005230	fubp1	70	78.166	ENSRROG00000043534	FUBP1	100	71.233	Rhinopithecus_roxellana
ENSFHEG00000005230	fubp1	70	78.384	ENSSBOG00000027299	FUBP1	98	73.469	Saimiri_boliviensis_boliviensis
ENSFHEG00000005230	fubp1	65	82.440	ENSSHAG00000005367	FUBP1	99	73.370	Sarcophilus_harrisii
ENSFHEG00000005230	fubp1	99	83.436	ENSSFOG00015010213	fubp1	99	83.282	Scleropages_formosus
ENSFHEG00000005230	fubp1	100	89.137	ENSSMAG00000012029	fubp1	98	88.839	Scophthalmus_maximus
ENSFHEG00000005230	fubp1	100	94.586	ENSSDUG00000007383	fubp1	98	94.586	Seriola_dumerili
ENSFHEG00000005230	fubp1	100	94.586	ENSSLDG00000022863	fubp1	98	94.586	Seriola_lalandi_dorsalis
ENSFHEG00000005230	fubp1	79	89.333	ENSSARG00000011730	FUBP1	59	89.474	Sorex_araneus
ENSFHEG00000005230	fubp1	99	68.249	ENSSPUG00000008389	FUBP1	100	68.353	Sphenodon_punctatus
ENSFHEG00000005230	fubp1	100	96.177	ENSSPAG00000010161	fubp1	100	96.177	Stegastes_partitus
ENSFHEG00000005230	fubp1	65	81.871	ENSTGUG00000006841	FUBP1	100	72.078	Taeniopygia_guttata
ENSFHEG00000005230	fubp1	100	86.873	ENSTRUG00000004615	fubp1	100	87.316	Takifugu_rubripes
ENSFHEG00000005230	fubp1	60	89.855	ENSTNIG00000019815	-	87	94.558	Tetraodon_nigroviridis
ENSFHEG00000005230	fubp1	80	82.716	ENSTBEG00000017333	FUBP1	62	88.690	Tupaia_belangeri
ENSFHEG00000005230	fubp1	70	78.384	ENSTTRG00000000096	FUBP1	98	71.189	Tursiops_truncatus
ENSFHEG00000005230	fubp1	74	83.036	ENSVPAG00000004709	FUBP1	99	71.189	Vicugna_pacos
ENSFHEG00000005230	fubp1	100	85.976	ENSXCOG00000019354	fubp1	100	86.128	Xiphophorus_couchianus
ENSFHEG00000005230	fubp1	97	92.695	ENSXMAG00000007168	fubp1	99	98.662	Xiphophorus_maculatus