EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000005448 (Gene tree)
Gene ID: 105938057
Gene Symbol: polr2f
Alias: zgc:92790
Full Name: RNA polymerase II subunit F
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 6033 bases
Position: chrKN811532.1:864409-870441
Accession: 105938057
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000004516	RNA_pol_Rpb6	PF01192.22	1.3e-15	1	1
ENSFHEP00000004528	RNA_pol_Rpb6	PF01192.22	5.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000008712	-	2663	XM_012879672	ENSFHEP00000004516	126 (aa)	XP_012735126	A0A146ZNR2
ENSFHET00000008704	-	489	-	ENSFHEP00000004528	162 (aa)	-	-

Gene Model

Click here to download ENSFHEG00000005448's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000005448's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000005448	polr2f	84	88.679	ENSG00000100142	POLR2F	92	88.393	Homo_sapiens
ENSFHEG00000005448	polr2f	100	95.276	ENSAPOG00000002902	polr2f	100	95.276	Acanthochromis_polyacanthus
ENSFHEG00000005448	polr2f	84	87.736	ENSAMEG00000010331	POLR2F	88	87.500	Ailuropoda_melanoleuca
ENSFHEG00000005448	polr2f	84	97.170	ENSACIG00000000923	polr2f	88	97.321	Amphilophus_citrinellus
ENSFHEG00000005448	polr2f	100	96.063	ENSAOCG00000003182	polr2f	100	96.063	Amphiprion_ocellaris
ENSFHEG00000005448	polr2f	100	96.063	ENSAPEG00000012999	polr2f	100	96.063	Amphiprion_percula
ENSFHEG00000005448	polr2f	84	97.170	ENSATEG00000008929	polr2f	88	97.321	Anabas_testudineus
ENSFHEG00000005448	polr2f	80	88.119	ENSAPLG00000015235	POLR2F	90	87.500	Anas_platyrhynchos
ENSFHEG00000005448	polr2f	84	89.623	ENSACAG00000015288	POLR2F	88	89.286	Anolis_carolinensis
ENSFHEG00000005448	polr2f	84	88.679	ENSANAG00000020840	POLR2F	92	88.393	Aotus_nancymaae
ENSFHEG00000005448	polr2f	84	96.226	ENSACLG00000016129	polr2f	88	96.429	Astatotilapia_calliptera
ENSFHEG00000005448	polr2f	84	97.170	ENSAMXG00000012812	polr2f	88	96.429	Astyanax_mexicanus
ENSFHEG00000005448	polr2f	84	88.679	ENSBTAG00000004820	POLR2F	88	88.393	Bos_taurus
ENSFHEG00000005448	polr2f	63	77.500	WBGene00007355	rpb-6	74	66.990	Caenorhabditis_elegans
ENSFHEG00000005448	polr2f	84	88.679	ENSCJAG00000048241	POLR2F	92	88.393	Callithrix_jacchus
ENSFHEG00000005448	polr2f	84	87.736	ENSCAFG00000001437	POLR2F	88	87.500	Canis_familiaris
ENSFHEG00000005448	polr2f	84	88.679	ENSCHIG00000012907	POLR2F	88	88.393	Capra_hircus
ENSFHEG00000005448	polr2f	84	87.736	ENSTSYG00000008187	POLR2F	88	87.500	Carlito_syrichta
ENSFHEG00000005448	polr2f	84	88.679	ENSCAPG00000013419	POLR2F	88	88.393	Cavia_aperea
ENSFHEG00000005448	polr2f	84	88.679	ENSCPOG00000034094	POLR2F	88	88.393	Cavia_porcellus
ENSFHEG00000005448	polr2f	84	88.679	ENSCCAG00000036489	POLR2F	88	88.393	Cebus_capucinus
ENSFHEG00000005448	polr2f	84	88.679	ENSCATG00000041014	POLR2F	92	88.393	Cercocebus_atys
ENSFHEG00000005448	polr2f	84	88.679	ENSCLAG00000017167	POLR2F	88	88.393	Chinchilla_lanigera
ENSFHEG00000005448	polr2f	84	88.679	ENSCSAG00000006862	POLR2F	88	88.393	Chlorocebus_sabaeus
ENSFHEG00000005448	polr2f	84	89.623	ENSCPBG00000023030	POLR2F	57	90.090	Chrysemys_picta_bellii
ENSFHEG00000005448	polr2f	82	75.000	ENSCING00000019359	-	73	75.000	Ciona_intestinalis
ENSFHEG00000005448	polr2f	84	88.679	ENSCANG00000041884	POLR2F	92	88.393	Colobus_angolensis_palliatus
ENSFHEG00000005448	polr2f	84	88.679	ENSCGRG00001023541	POLR2F	88	88.393	Cricetulus_griseus_chok1gshd
ENSFHEG00000005448	polr2f	84	88.679	ENSCGRG00000011921	POLR2F	88	88.393	Cricetulus_griseus_crigri
ENSFHEG00000005448	polr2f	84	98.113	ENSCSEG00000006848	polr2f	88	98.214	Cynoglossus_semilaevis
ENSFHEG00000005448	polr2f	100	97.638	ENSCVAG00000010437	polr2f	100	97.638	Cyprinodon_variegatus
ENSFHEG00000005448	polr2f	84	97.170	ENSDARG00000036625	polr2f	88	93.750	Danio_rerio
ENSFHEG00000005448	polr2f	84	88.679	ENSDNOG00000005884	POLR2F	88	88.393	Dasypus_novemcinctus
ENSFHEG00000005448	polr2f	84	88.679	ENSDORG00000024789	Polr2f	88	88.393	Dipodomys_ordii
ENSFHEG00000005448	polr2f	79	70.588	FBgn0003275	RpII18	95	64.000	Drosophila_melanogaster
ENSFHEG00000005448	polr2f	54	85.294	ENSEBUG00000008509	polr2f	89	71.910	Eptatretus_burgeri
ENSFHEG00000005448	polr2f	78	68.367	ENSEBUG00000002842	-	98	61.947	Eptatretus_burgeri
ENSFHEG00000005448	polr2f	60	86.842	ENSEASG00005018802	-	75	86.747	Equus_asinus_asinus
ENSFHEG00000005448	polr2f	84	85.849	ENSEEUG00000011014	POLR2F	88	85.714	Erinaceus_europaeus
ENSFHEG00000005448	polr2f	84	95.283	ENSELUG00000000319	polr2f	88	95.536	Esox_lucius
ENSFHEG00000005448	polr2f	84	87.736	ENSFCAG00000002806	POLR2F	92	87.500	Felis_catus
ENSFHEG00000005448	polr2f	84	88.679	ENSFDAG00000009926	POLR2F	88	88.393	Fukomys_damarensis
ENSFHEG00000005448	polr2f	100	87.402	ENSGMOG00000009967	polr2f	88	88.393	Gadus_morhua
ENSFHEG00000005448	polr2f	84	89.623	ENSGALG00000012291	POLR2F	88	89.286	Gallus_gallus
ENSFHEG00000005448	polr2f	100	96.850	ENSGAFG00000017573	polr2f	100	96.850	Gambusia_affinis
ENSFHEG00000005448	polr2f	100	92.913	ENSGACG00000007322	polr2f	88	93.750	Gasterosteus_aculeatus
ENSFHEG00000005448	polr2f	84	89.623	ENSGAGG00000021757	POLR2F	88	89.286	Gopherus_agassizii
ENSFHEG00000005448	polr2f	84	88.679	ENSGGOG00000005213	POLR2F	92	88.393	Gorilla_gorilla
ENSFHEG00000005448	polr2f	84	96.226	ENSHBUG00000022089	polr2f	88	96.429	Haplochromis_burtoni
ENSFHEG00000005448	polr2f	84	88.679	ENSHGLG00000018942	POLR2F	88	88.393	Heterocephalus_glaber_female
ENSFHEG00000005448	polr2f	84	88.679	ENSHGLG00100012851	POLR2F	88	88.393	Heterocephalus_glaber_male
ENSFHEG00000005448	polr2f	84	91.509	ENSHCOG00000006149	polr2f	88	91.964	Hippocampus_comes
ENSFHEG00000005448	polr2f	77	96.907	ENSIPUG00000000814	polr2f	100	96.907	Ictalurus_punctatus
ENSFHEG00000005448	polr2f	84	88.679	ENSSTOG00000025722	POLR2F	88	88.393	Ictidomys_tridecemlineatus
ENSFHEG00000005448	polr2f	84	88.679	ENSJJAG00000008097	Polr2f	88	88.393	Jaculus_jaculus
ENSFHEG00000005448	polr2f	84	97.170	ENSKMAG00000014230	polr2f	88	96.429	Kryptolebias_marmoratus
ENSFHEG00000005448	polr2f	84	94.340	ENSLBEG00000008383	polr2f	93	93.750	Labrus_bergylta
ENSFHEG00000005448	polr2f	84	93.396	ENSLACG00000003931	POLR2F	88	92.857	Latimeria_chalumnae
ENSFHEG00000005448	polr2f	84	94.495	ENSLOCG00000011827	polr2f	88	93.913	Lepisosteus_oculatus
ENSFHEG00000005448	polr2f	84	88.679	ENSLAFG00000012632	POLR2F	88	88.393	Loxodonta_africana
ENSFHEG00000005448	polr2f	84	88.679	ENSMFAG00000033687	POLR2F	92	88.393	Macaca_fascicularis
ENSFHEG00000005448	polr2f	84	88.679	ENSMMUG00000038231	POLR2F	92	88.393	Macaca_mulatta
ENSFHEG00000005448	polr2f	84	88.679	ENSMNEG00000044365	POLR2F	92	88.393	Macaca_nemestrina
ENSFHEG00000005448	polr2f	84	88.679	ENSMLEG00000033077	POLR2F	92	88.393	Mandrillus_leucophaeus
ENSFHEG00000005448	polr2f	84	96.226	ENSMAMG00000008056	polr2f	88	96.429	Mastacembelus_armatus
ENSFHEG00000005448	polr2f	84	96.226	ENSMZEG00005005705	polr2f	88	96.429	Maylandia_zebra
ENSFHEG00000005448	polr2f	84	89.623	ENSMGAG00000012504	POLR2F	88	89.286	Meleagris_gallopavo
ENSFHEG00000005448	polr2f	84	88.679	ENSMAUG00000018586	Polr2f	88	88.393	Mesocricetus_auratus
ENSFHEG00000005448	polr2f	84	88.679	ENSMICG00000013128	POLR2F	92	88.393	Microcebus_murinus
ENSFHEG00000005448	polr2f	84	88.679	ENSMOCG00000000237	Polr2f	88	88.393	Microtus_ochrogaster
ENSFHEG00000005448	polr2f	100	96.063	ENSMMOG00000005106	polr2f	100	96.063	Mola_mola
ENSFHEG00000005448	polr2f	84	89.623	ENSMODG00000019063	POLR2F	88	89.286	Monodelphis_domestica
ENSFHEG00000005448	polr2f	100	95.276	ENSMALG00000001444	polr2f	100	95.276	Monopterus_albus
ENSFHEG00000005448	polr2f	84	87.736	MGP_CAROLIEiJ_G0020006	Polr2f	88	87.500	Mus_caroli
ENSFHEG00000005448	polr2f	84	87.736	ENSMUSG00000033020	Polr2f	88	87.500	Mus_musculus
ENSFHEG00000005448	polr2f	84	87.736	MGP_PahariEiJ_G0020008	Polr2f	88	87.500	Mus_pahari
ENSFHEG00000005448	polr2f	84	87.736	MGP_SPRETEiJ_G0020904	Polr2f	88	87.500	Mus_spretus
ENSFHEG00000005448	polr2f	84	87.736	ENSMPUG00000012997	POLR2F	88	87.500	Mustela_putorius_furo
ENSFHEG00000005448	polr2f	98	75.200	ENSMLUG00000029612	-	87	83.486	Myotis_lucifugus
ENSFHEG00000005448	polr2f	84	86.111	ENSMLUG00000014315	-	88	85.965	Myotis_lucifugus
ENSFHEG00000005448	polr2f	84	88.679	ENSNGAG00000020682	Polr2f	88	88.393	Nannospalax_galili
ENSFHEG00000005448	polr2f	84	97.170	ENSNBRG00000002492	polr2f	88	97.321	Neolamprologus_brichardi
ENSFHEG00000005448	polr2f	84	88.679	ENSNLEG00000014987	-	92	88.393	Nomascus_leucogenys
ENSFHEG00000005448	polr2f	84	88.679	ENSODEG00000014123	POLR2F	88	88.393	Octodon_degus
ENSFHEG00000005448	polr2f	84	97.170	ENSONIG00000008394	polr2f	88	97.321	Oreochromis_niloticus
ENSFHEG00000005448	polr2f	84	89.623	ENSOANG00000014684	POLR2F	88	89.286	Ornithorhynchus_anatinus
ENSFHEG00000005448	polr2f	84	88.679	ENSOCUG00000012064	POLR2F	88	88.393	Oryctolagus_cuniculus
ENSFHEG00000005448	polr2f	100	95.276	ENSORLG00000014580	polr2f	88	96.429	Oryzias_latipes
ENSFHEG00000005448	polr2f	100	96.063	ENSORLG00020006910	polr2f	100	96.063	Oryzias_latipes_hni
ENSFHEG00000005448	polr2f	90	89.474	ENSORLG00015015332	polr2f	67	95.960	Oryzias_latipes_hsok
ENSFHEG00000005448	polr2f	64	93.827	ENSOMEG00000006530	polr2f	57	87.629	Oryzias_melastigma
ENSFHEG00000005448	polr2f	84	88.679	ENSOGAG00000025463	POLR2F	88	88.393	Otolemur_garnettii
ENSFHEG00000005448	polr2f	84	88.679	ENSOARG00000014692	POLR2F	88	88.393	Ovis_aries
ENSFHEG00000005448	polr2f	84	88.679	ENSPPAG00000024276	POLR2F	92	88.393	Pan_paniscus
ENSFHEG00000005448	polr2f	84	87.736	ENSPPRG00000013030	POLR2F	92	87.500	Panthera_pardus
ENSFHEG00000005448	polr2f	83	87.500	ENSPTIG00000000632	POLR2F	92	85.714	Panthera_tigris_altaica
ENSFHEG00000005448	polr2f	84	88.679	ENSPTRG00000014356	POLR2F	92	88.393	Pan_troglodytes
ENSFHEG00000005448	polr2f	84	88.679	ENSPANG00000023979	POLR2F	92	88.393	Papio_anubis
ENSFHEG00000005448	polr2f	84	97.170	ENSPKIG00000002464	polr2f	88	96.429	Paramormyrops_kingsleyae
ENSFHEG00000005448	polr2f	56	94.366	ENSPSIG00000013913	POLR2F	100	94.366	Pelodiscus_sinensis
ENSFHEG00000005448	polr2f	100	96.063	ENSPMGG00000009619	polr2f	100	96.063	Periophthalmus_magnuspinnatus
ENSFHEG00000005448	polr2f	84	88.679	ENSPEMG00000008322	Polr2f	88	88.393	Peromyscus_maniculatus_bairdii
ENSFHEG00000005448	polr2f	84	89.623	ENSPCIG00000012000	-	88	89.286	Phascolarctos_cinereus
ENSFHEG00000005448	polr2f	100	97.638	ENSPFOG00000000139	polr2f	100	97.638	Poecilia_formosa
ENSFHEG00000005448	polr2f	100	97.638	ENSPLAG00000000988	polr2f	100	97.638	Poecilia_latipinna
ENSFHEG00000005448	polr2f	100	97.638	ENSPMEG00000019063	polr2f	100	97.638	Poecilia_mexicana
ENSFHEG00000005448	polr2f	77	96.939	ENSPREG00000016749	polr2f	100	96.939	Poecilia_reticulata
ENSFHEG00000005448	polr2f	84	88.679	ENSPPYG00000011809	POLR2F	88	88.393	Pongo_abelii
ENSFHEG00000005448	polr2f	84	88.679	ENSPCOG00000025716	POLR2F	92	88.393	Propithecus_coquereli
ENSFHEG00000005448	polr2f	63	86.076	ENSPVAG00000010107	POLR2F	52	89.024	Pteropus_vampyrus
ENSFHEG00000005448	polr2f	84	96.226	ENSPNYG00000019790	polr2f	88	96.429	Pundamilia_nyererei
ENSFHEG00000005448	polr2f	100	95.276	ENSPNAG00000009017	polr2f	100	95.276	Pygocentrus_nattereri
ENSFHEG00000005448	polr2f	84	87.736	ENSRNOG00000011214	Polr2f	88	87.500	Rattus_norvegicus
ENSFHEG00000005448	polr2f	84	88.679	ENSRBIG00000044878	POLR2F	92	88.393	Rhinopithecus_bieti
ENSFHEG00000005448	polr2f	84	88.679	ENSRROG00000019586	POLR2F	92	88.393	Rhinopithecus_roxellana
ENSFHEG00000005448	polr2f	84	88.679	ENSSBOG00000023340	POLR2F	92	88.393	Saimiri_boliviensis_boliviensis
ENSFHEG00000005448	polr2f	84	89.623	ENSSHAG00000008502	POLR2F	88	89.286	Sarcophilus_harrisii
ENSFHEG00000005448	polr2f	84	96.226	ENSSFOG00015012810	polr2f	88	95.536	Scleropages_formosus
ENSFHEG00000005448	polr2f	100	96.850	ENSSMAG00000005354	polr2f	100	96.850	Scophthalmus_maximus
ENSFHEG00000005448	polr2f	100	96.063	ENSSDUG00000016273	polr2f	100	96.063	Seriola_dumerili
ENSFHEG00000005448	polr2f	100	96.063	ENSSLDG00000024895	polr2f	100	96.063	Seriola_lalandi_dorsalis
ENSFHEG00000005448	polr2f	84	89.623	ENSSPUG00000011343	POLR2F	88	89.286	Sphenodon_punctatus
ENSFHEG00000005448	polr2f	84	96.226	ENSSPAG00000019646	polr2f	88	96.429	Stegastes_partitus
ENSFHEG00000005448	polr2f	84	87.736	ENSSSCG00000000116	POLR2F	88	87.500	Sus_scrofa
ENSFHEG00000005448	polr2f	80	89.109	ENSTGUG00000010476	POLR2F	81	89.189	Taeniopygia_guttata
ENSFHEG00000005448	polr2f	57	88.889	ENSTGUG00000016504	-	93	89.024	Taeniopygia_guttata
ENSFHEG00000005448	polr2f	100	95.276	ENSTRUG00000021130	polr2f	71	95.276	Takifugu_rubripes
ENSFHEG00000005448	polr2f	100	95.276	ENSTNIG00000010827	polr2f	100	95.276	Tetraodon_nigroviridis
ENSFHEG00000005448	polr2f	63	86.076	ENSTTRG00000004817	POLR2F	52	89.024	Tursiops_truncatus
ENSFHEG00000005448	polr2f	84	87.736	ENSUAMG00000020504	POLR2F	88	87.500	Ursus_americanus
ENSFHEG00000005448	polr2f	84	87.736	ENSUMAG00000015052	POLR2F	88	87.500	Ursus_maritimus
ENSFHEG00000005448	polr2f	84	87.736	ENSVVUG00000024021	POLR2F	85	87.500	Vulpes_vulpes
ENSFHEG00000005448	polr2f	84	90.566	ENSXETG00000006346	polr2f	87	90.991	Xenopus_tropicalis
ENSFHEG00000005448	polr2f	100	97.638	ENSXCOG00000015983	polr2f	100	97.638	Xiphophorus_couchianus
ENSFHEG00000005448	polr2f	100	97.638	ENSXMAG00000001559	polr2f	100	97.638	Xiphophorus_maculatus