EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000005470 (Gene tree)
Gene ID: 105919567
Gene Symbol: tsen54
Alias: zgc:109927
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 10925 bases
Position: chrKN805976.1:9805-20729
Accession: 105919567
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000004564	tRNA_int_end_N2	PF12928.7	1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000008631	-	2289	XM_012854900	ENSFHEP00000004564	504 (aa)	XP_012710354	UPI0006448B59

Gene Model

Click here to download ENSFHEG00000005470's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000005470's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000005470	tsen54	96	46.139	ENSG00000182173	TSEN54	100	63.889	Homo_sapiens
ENSFHEG00000005470	tsen54	100	74.854	ENSAPOG00000009659	tsen54	100	73.671	Acanthochromis_polyacanthus
ENSFHEG00000005470	tsen54	95	46.589	ENSAMEG00000009414	TSEN54	96	46.667	Ailuropoda_melanoleuca
ENSFHEG00000005470	tsen54	100	74.514	ENSAOCG00000000152	tsen54	98	74.514	Amphiprion_ocellaris
ENSFHEG00000005470	tsen54	100	74.125	ENSAPEG00000018931	tsen54	98	74.125	Amphiprion_percula
ENSFHEG00000005470	tsen54	100	69.101	ENSATEG00000019860	tsen54	100	69.101	Anabas_testudineus
ENSFHEG00000005470	tsen54	85	47.124	ENSAPLG00000009419	TSEN54	99	46.681	Anas_platyrhynchos
ENSFHEG00000005470	tsen54	98	47.399	ENSACAG00000006714	TSEN54	99	47.206	Anolis_carolinensis
ENSFHEG00000005470	tsen54	96	46.243	ENSANAG00000024061	TSEN54	96	47.195	Aotus_nancymaae
ENSFHEG00000005470	tsen54	100	71.760	ENSACLG00000019800	tsen54	100	71.760	Astatotilapia_calliptera
ENSFHEG00000005470	tsen54	97	59.519	ENSAMXG00000006546	tsen54	97	59.519	Astyanax_mexicanus
ENSFHEG00000005470	tsen54	96	46.304	ENSBTAG00000000824	TSEN54	97	46.718	Bos_taurus
ENSFHEG00000005470	tsen54	96	45.898	ENSCJAG00000014278	TSEN54	96	47.945	Callithrix_jacchus
ENSFHEG00000005470	tsen54	96	47.002	ENSCAFG00000004798	TSEN54	97	47.093	Canis_familiaris
ENSFHEG00000005470	tsen54	96	47.002	ENSCAFG00020000312	TSEN54	97	47.093	Canis_lupus_dingo
ENSFHEG00000005470	tsen54	96	45.914	ENSCHIG00000019908	TSEN54	97	45.720	Capra_hircus
ENSFHEG00000005470	tsen54	85	44.492	ENSTSYG00000037439	TSEN54	99	46.137	Carlito_syrichta
ENSFHEG00000005470	tsen54	96	47.389	ENSCCAG00000036624	TSEN54	96	47.195	Cebus_capucinus
ENSFHEG00000005470	tsen54	96	46.035	ENSCATG00000042877	TSEN54	96	46.705	Cercocebus_atys
ENSFHEG00000005470	tsen54	96	47.379	ENSCLAG00000002924	TSEN54	96	47.184	Chinchilla_lanigera
ENSFHEG00000005470	tsen54	96	45.946	ENSCSAG00000004809	TSEN54	97	46.899	Chlorocebus_sabaeus
ENSFHEG00000005470	tsen54	97	47.969	ENSCPBG00000028071	TSEN54	98	47.002	Chrysemys_picta_bellii
ENSFHEG00000005470	tsen54	96	46.228	ENSCANG00000028053	TSEN54	97	46.899	Colobus_angolensis_palliatus
ENSFHEG00000005470	tsen54	96	47.093	ENSCGRG00001020029	Tsen54	97	47.093	Cricetulus_griseus_chok1gshd
ENSFHEG00000005470	tsen54	84	45.434	ENSCGRG00000016289	Tsen54	99	45.434	Cricetulus_griseus_crigri
ENSFHEG00000005470	tsen54	80	57.041	ENSCSEG00000020586	tsen54	99	56.563	Cynoglossus_semilaevis
ENSFHEG00000005470	tsen54	80	58.049	ENSDARG00000036844	tsen54	100	58.293	Danio_rerio
ENSFHEG00000005470	tsen54	96	47.206	ENSDNOG00000018452	TSEN54	97	47.082	Dasypus_novemcinctus
ENSFHEG00000005470	tsen54	96	46.863	ENSDORG00000004073	Tsen54	97	47.451	Dipodomys_ordii
ENSFHEG00000005470	tsen54	73	43.919	ENSEBUG00000005203	TSEN54	69	43.919	Eptatretus_burgeri
ENSFHEG00000005470	tsen54	96	45.785	ENSEASG00005000579	TSEN54	97	45.785	Equus_asinus_asinus
ENSFHEG00000005470	tsen54	96	45.785	ENSECAG00000004924	TSEN54	97	45.594	Equus_caballus
ENSFHEG00000005470	tsen54	85	43.844	ENSEEUG00000008467	TSEN54	99	43.844	Erinaceus_europaeus
ENSFHEG00000005470	tsen54	99	59.041	ENSELUG00000017703	tsen54	92	59.594	Esox_lucius
ENSFHEG00000005470	tsen54	96	46.809	ENSFCAG00000023712	TSEN54	97	46.796	Felis_catus
ENSFHEG00000005470	tsen54	93	46.626	ENSFALG00000001119	TSEN54	92	47.239	Ficedula_albicollis
ENSFHEG00000005470	tsen54	85	46.070	ENSFDAG00000019090	TSEN54	99	46.070	Fukomys_damarensis
ENSFHEG00000005470	tsen54	85	59.358	ENSGMOG00000013146	tsen54	99	59.358	Gadus_morhua
ENSFHEG00000005470	tsen54	96	44.639	ENSGALG00000047163	TSEN54	99	44.250	Gallus_gallus
ENSFHEG00000005470	tsen54	100	81.225	ENSGAFG00000005111	tsen54	100	81.225	Gambusia_affinis
ENSFHEG00000005470	tsen54	96	65.854	ENSGACG00000014987	tsen54	100	65.650	Gasterosteus_aculeatus
ENSFHEG00000005470	tsen54	97	47.566	ENSGAGG00000006825	TSEN54	96	47.566	Gopherus_agassizii
ENSFHEG00000005470	tsen54	95	46.004	ENSGGOG00000009417	TSEN54	99	46.967	Gorilla_gorilla
ENSFHEG00000005470	tsen54	90	70.664	ENSHBUG00000018296	tsen54	92	70.664	Haplochromis_burtoni
ENSFHEG00000005470	tsen54	96	49.031	ENSHGLG00000007979	TSEN54	97	48.837	Heterocephalus_glaber_female
ENSFHEG00000005470	tsen54	96	48.062	ENSHGLG00100005497	TSEN54	97	47.868	Heterocephalus_glaber_male
ENSFHEG00000005470	tsen54	80	65.783	ENSHCOG00000007481	tsen54	100	66.265	Hippocampus_comes
ENSFHEG00000005470	tsen54	98	52.165	ENSIPUG00000000590	tsen54	97	52.165	Ictalurus_punctatus
ENSFHEG00000005470	tsen54	96	46.615	ENSSTOG00000012883	TSEN54	97	46.615	Ictidomys_tridecemlineatus
ENSFHEG00000005470	tsen54	96	46.525	ENSJJAG00000007365	Tsen54	97	46.332	Jaculus_jaculus
ENSFHEG00000005470	tsen54	100	74.242	ENSKMAG00000006944	tsen54	100	74.053	Kryptolebias_marmoratus
ENSFHEG00000005470	tsen54	100	66.985	ENSLBEG00000004199	tsen54	100	66.985	Labrus_bergylta
ENSFHEG00000005470	tsen54	96	42.775	ENSLACG00000009497	TSEN54	99	42.775	Latimeria_chalumnae
ENSFHEG00000005470	tsen54	97	55.728	ENSLOCG00000011191	tsen54	97	55.534	Lepisosteus_oculatus
ENSFHEG00000005470	tsen54	92	46.708	ENSLAFG00000011655	TSEN54	92	46.584	Loxodonta_africana
ENSFHEG00000005470	tsen54	96	45.946	ENSMFAG00000000712	TSEN54	97	46.899	Macaca_fascicularis
ENSFHEG00000005470	tsen54	96	45.946	ENSMNEG00000029199	TSEN54	97	46.899	Macaca_nemestrina
ENSFHEG00000005470	tsen54	100	69.455	ENSMAMG00000019773	tsen54	100	69.844	Mastacembelus_armatus
ENSFHEG00000005470	tsen54	100	71.567	ENSMZEG00005000884	tsen54	100	71.567	Maylandia_zebra
ENSFHEG00000005470	tsen54	92	44.960	ENSMGAG00000009556	TSEN54	92	45.161	Meleagris_gallopavo
ENSFHEG00000005470	tsen54	96	46.693	ENSMAUG00000016838	Tsen54	97	46.693	Mesocricetus_auratus
ENSFHEG00000005470	tsen54	96	49.400	ENSMICG00000044012	TSEN54	96	49.400	Microcebus_murinus
ENSFHEG00000005470	tsen54	96	47.835	ENSMOCG00000021585	Tsen54	97	47.835	Microtus_ochrogaster
ENSFHEG00000005470	tsen54	96	65.041	ENSMMOG00000020189	tsen54	99	66.463	Mola_mola
ENSFHEG00000005470	tsen54	96	45.298	ENSMODG00000007438	TSEN54	95	44.914	Monodelphis_domestica
ENSFHEG00000005470	tsen54	99	70.633	ENSMALG00000020573	tsen54	99	70.825	Monopterus_albus
ENSFHEG00000005470	tsen54	96	46.654	MGP_CAROLIEiJ_G0017417	Tsen54	97	46.654	Mus_caroli
ENSFHEG00000005470	tsen54	96	46.449	ENSMUSG00000020781	Tsen54	97	46.449	Mus_musculus
ENSFHEG00000005470	tsen54	96	48.062	MGP_PahariEiJ_G0018547	Tsen54	97	47.868	Mus_pahari
ENSFHEG00000005470	tsen54	96	46.257	MGP_SPRETEiJ_G0018262	Tsen54	97	46.257	Mus_spretus
ENSFHEG00000005470	tsen54	96	45.736	ENSMPUG00000013870	TSEN54	97	46.124	Mustela_putorius_furo
ENSFHEG00000005470	tsen54	96	47.117	ENSMLUG00000015298	TSEN54	96	46.918	Myotis_lucifugus
ENSFHEG00000005470	tsen54	96	46.602	ENSNGAG00000015673	Tsen54	97	46.602	Nannospalax_galili
ENSFHEG00000005470	tsen54	88	40.899	ENSMEUG00000011908	TSEN54	99	40.899	Notamacropus_eugenii
ENSFHEG00000005470	tsen54	96	45.110	ENSOPRG00000012513	TSEN54	96	45.110	Ochotona_princeps
ENSFHEG00000005470	tsen54	100	71.429	ENSONIG00000009543	tsen54	100	71.429	Oreochromis_niloticus
ENSFHEG00000005470	tsen54	96	42.144	ENSOCUG00000009875	TSEN54	97	43.702	Oryctolagus_cuniculus
ENSFHEG00000005470	tsen54	100	69.841	ENSORLG00000000852	tsen54	100	69.841	Oryzias_latipes
ENSFHEG00000005470	tsen54	100	69.643	ENSORLG00020018221	tsen54	100	69.841	Oryzias_latipes_hni
ENSFHEG00000005470	tsen54	98	70.183	ENSORLG00015009413	tsen54	99	70.385	Oryzias_latipes_hsok
ENSFHEG00000005470	tsen54	100	71.032	ENSOMEG00000014402	tsen54	97	71.032	Oryzias_melastigma
ENSFHEG00000005470	tsen54	96	45.850	ENSOGAG00000001442	TSEN54	97	45.455	Otolemur_garnettii
ENSFHEG00000005470	tsen54	85	44.079	ENSOARG00000010361	TSEN54	99	44.662	Ovis_aries
ENSFHEG00000005470	tsen54	94	45.833	ENSPPAG00000043519	TSEN54	99	46.918	Pan_paniscus
ENSFHEG00000005470	tsen54	96	47.002	ENSPPRG00000009162	TSEN54	97	46.990	Panthera_pardus
ENSFHEG00000005470	tsen54	85	44.783	ENSPTIG00000019312	TSEN54	96	45.000	Panthera_tigris_altaica
ENSFHEG00000005470	tsen54	96	46.139	ENSPTRG00000009646	TSEN54	97	47.093	Pan_troglodytes
ENSFHEG00000005470	tsen54	96	46.787	ENSPANG00000020133	TSEN54	96	47.012	Papio_anubis
ENSFHEG00000005470	tsen54	99	55.556	ENSPKIG00000023018	tsen54	99	55.738	Paramormyrops_kingsleyae
ENSFHEG00000005470	tsen54	80	44.522	ENSPSIG00000012807	TSEN54	100	44.056	Pelodiscus_sinensis
ENSFHEG00000005470	tsen54	93	47.699	ENSPMGG00000019578	tsen54	100	47.490	Periophthalmus_magnuspinnatus
ENSFHEG00000005470	tsen54	96	45.455	ENSPEMG00000014857	Tsen54	97	45.261	Peromyscus_maniculatus_bairdii
ENSFHEG00000005470	tsen54	100	81.373	ENSPFOG00000022740	tsen54	100	81.373	Poecilia_formosa
ENSFHEG00000005470	tsen54	100	82.016	ENSPLAG00000014847	tsen54	100	82.016	Poecilia_latipinna
ENSFHEG00000005470	tsen54	100	81.818	ENSPMEG00000022876	tsen54	100	81.818	Poecilia_mexicana
ENSFHEG00000005470	tsen54	100	80.952	ENSPREG00000013090	tsen54	100	80.952	Poecilia_reticulata
ENSFHEG00000005470	tsen54	91	46.970	ENSPPYG00000008629	TSEN54	99	47.732	Pongo_abelii
ENSFHEG00000005470	tsen54	92	42.443	ENSPCAG00000002093	TSEN54	96	42.443	Procavia_capensis
ENSFHEG00000005470	tsen54	96	45.627	ENSPCOG00000027880	TSEN54	97	47.337	Propithecus_coquereli
ENSFHEG00000005470	tsen54	96	47.953	ENSPVAG00000008446	TSEN54	97	47.953	Pteropus_vampyrus
ENSFHEG00000005470	tsen54	93	71.020	ENSPNYG00000010217	tsen54	100	71.020	Pundamilia_nyererei
ENSFHEG00000005470	tsen54	97	56.250	ENSPNAG00000003770	tsen54	97	56.250	Pygocentrus_nattereri
ENSFHEG00000005470	tsen54	96	47.961	ENSRNOG00000004598	Tsen54	97	47.961	Rattus_norvegicus
ENSFHEG00000005470	tsen54	96	45.841	ENSRBIG00000043040	TSEN54	97	46.512	Rhinopithecus_bieti
ENSFHEG00000005470	tsen54	96	45.841	ENSRROG00000030797	TSEN54	97	46.512	Rhinopithecus_roxellana
ENSFHEG00000005470	tsen54	96	44.291	ENSSBOG00000013543	TSEN54	96	45.149	Saimiri_boliviensis_boliviensis
ENSFHEG00000005470	tsen54	96	44.742	ENSSHAG00000018127	TSEN54	96	44.742	Sarcophilus_harrisii
ENSFHEG00000005470	tsen54	80	53.721	ENSSFOG00015004093	tsen54	99	53.380	Scleropages_formosus
ENSFHEG00000005470	tsen54	97	69.094	ENSSMAG00000012449	tsen54	98	69.625	Scophthalmus_maximus
ENSFHEG00000005470	tsen54	100	73.423	ENSSDUG00000021506	tsen54	100	73.423	Seriola_dumerili
ENSFHEG00000005470	tsen54	100	73.231	ENSSLDG00000016303	tsen54	100	73.231	Seriola_lalandi_dorsalis
ENSFHEG00000005470	tsen54	79	43.897	ENSSPUG00000008988	TSEN54	96	42.991	Sphenodon_punctatus
ENSFHEG00000005470	tsen54	80	67.476	ENSSPAG00000008047	tsen54	100	67.476	Stegastes_partitus
ENSFHEG00000005470	tsen54	93	74.160	ENSSPAG00000008098	-	99	74.160	Stegastes_partitus
ENSFHEG00000005470	tsen54	96	46.680	ENSSSCG00000036852	TSEN54	97	46.979	Sus_scrofa
ENSFHEG00000005470	tsen54	85	47.124	ENSTGUG00000008548	TSEN54	99	46.460	Taeniopygia_guttata
ENSFHEG00000005470	tsen54	100	67.843	ENSTRUG00000004230	tsen54	100	67.451	Takifugu_rubripes
ENSFHEG00000005470	tsen54	96	63.241	ENSTNIG00000011281	tsen54	98	65.191	Tetraodon_nigroviridis
ENSFHEG00000005470	tsen54	84	45.982	ENSTTRG00000015828	TSEN54	98	45.536	Tursiops_truncatus
ENSFHEG00000005470	tsen54	80	44.028	ENSUAMG00000010045	TSEN54	99	43.794	Ursus_americanus
ENSFHEG00000005470	tsen54	83	44.820	ENSUMAG00000008979	TSEN54	99	44.898	Ursus_maritimus
ENSFHEG00000005470	tsen54	95	47.266	ENSVVUG00000011411	TSEN54	97	47.358	Vulpes_vulpes
ENSFHEG00000005470	tsen54	97	46.918	ENSXETG00000012532	tsen54	100	60.000	Xenopus_tropicalis
ENSFHEG00000005470	tsen54	97	72.393	ENSXCOG00000018245	tsen54	100	75.181	Xiphophorus_couchianus
ENSFHEG00000005470	tsen54	100	82.213	ENSXMAG00000018818	tsen54	100	82.213	Xiphophorus_maculatus