EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSFHEG00000005619 (Gene tree)
Gene ID
105925558
Gene Symbol
aco1
Alias
IRP1|wu:fo75b03
Full Name
aconitase 1
Gene Type
protein_coding
Species
Fundulus_heteroclitus
Status
putative
Strand
Minus strand
Length
20081 bases
Position
chrKN811286.1:48683-68763
Accession
105925558
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSFHEP00000004686AconitasePF00330.204.3e-18111
ENSFHEP00000004701AconitasePF00330.204.4e-18111
ENSFHEP00000004712AconitasePF00330.204.4e-18111
ENSFHEP00000004686Aconitase_CPF00694.191.6e-4411
ENSFHEP00000004701Aconitase_CPF00694.191.6e-4411
ENSFHEP00000004712Aconitase_CPF00694.191.6e-4411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSFHET00000008387-4667XM_012861472ENSFHEP00000004712894 (aa)XP_012716926UPI0006447B55
ENSFHET00000008419-2679-ENSFHEP00000004686892 (aa)--
ENSFHET00000008399-4992-ENSFHEP00000004701894 (aa)-UPI0006447B55
Gene Model
Click here to download ENSFHEG00000005619's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000005619's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSFHEG00000005619aco19959.848ENSFHEG00000017905ireb28760.870
ENSFHEG00000005619aco18330.984ENSFHEG00000012709aco27930.984
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSFHEG00000005619aco19982.525ENSG00000122729ACO19982.525Homo_sapiens
ENSFHEG00000005619aco110088.479ENSAPOG00000008670aco110088.479Acanthochromis_polyacanthus
ENSFHEG00000005619aco19982.207ENSAMEG00000003746ACO19982.207Ailuropoda_melanoleuca
ENSFHEG00000005619aco110088.255ENSACIG00000014377aco110088.255Amphilophus_citrinellus
ENSFHEG00000005619aco110088.702ENSAOCG00000007699aco110088.702Amphiprion_ocellaris
ENSFHEG00000005619aco110088.591ENSAPEG00000014370aco110088.591Amphiprion_percula
ENSFHEG00000005619aco110090.380ENSATEG00000000560aco110090.380Anabas_testudineus
ENSFHEG00000005619aco19982.074ENSAPLG00000015490ACO19982.074Anas_platyrhynchos
ENSFHEG00000005619aco19681.616ENSACAG00000001541ACO19981.616Anolis_carolinensis
ENSFHEG00000005619aco19981.172ENSANAG00000003359ACO19981.172Aotus_nancymaae
ENSFHEG00000005619aco110088.367ENSACLG00000007755aco110088.367Astatotilapia_calliptera
ENSFHEG00000005619aco19985.602ENSAMXG00000002499aco19985.602Astyanax_mexicanus
ENSFHEG00000005619aco19982.074ENSBTAG00000000555ACO19982.074Bos_taurus
ENSFHEG00000005619aco19981.849ENSCJAG00000007687ACO19981.849Callithrix_jacchus
ENSFHEG00000005619aco19981.573ENSCAFG00000001786ACO19981.573Canis_familiaris
ENSFHEG00000005619aco19981.849ENSCAFG00020014553ACO19981.849Canis_lupus_dingo
ENSFHEG00000005619aco19982.187ENSCHIG00000007667ACO19982.187Capra_hircus
ENSFHEG00000005619aco19982.638ENSTSYG00000004179ACO19982.638Carlito_syrichta
ENSFHEG00000005619aco19966.253ENSCAPG00000007254ACO19966.140Cavia_aperea
ENSFHEG00000005619aco19982.167ENSCPOG00000003768ACO19982.167Cavia_porcellus
ENSFHEG00000005619aco19981.623ENSCCAG00000022465ACO19981.623Cebus_capucinus
ENSFHEG00000005619aco19982.525ENSCATG00000045333ACO19982.525Cercocebus_atys
ENSFHEG00000005619aco19981.060ENSCLAG00000002487ACO19981.060Chinchilla_lanigera
ENSFHEG00000005619aco19982.300ENSCSAG00000009824ACO19982.300Chlorocebus_sabaeus
ENSFHEG00000005619aco19064.970ENSCHOG00000008996ACO19064.812Choloepus_hoffmanni
ENSFHEG00000005619aco19981.736ENSCPBG00000008077ACO19981.736Chrysemys_picta_bellii
ENSFHEG00000005619aco19982.300ENSCANG00000014847ACO19982.300Colobus_angolensis_palliatus
ENSFHEG00000005619aco19983.089ENSCGRG00001024337Aco19983.089Cricetulus_griseus_chok1gshd
ENSFHEG00000005619aco19982.187ENSCGRG00000004877-9982.187Cricetulus_griseus_crigri
ENSFHEG00000005619aco110085.123ENSCSEG00000018262aco110085.123Cynoglossus_semilaevis
ENSFHEG00000005619aco110085.347ENSCVAG00000020264aco110085.347Cyprinodon_variegatus
ENSFHEG00000005619aco19984.589ENSDARG00000026376aco19984.589Danio_rerio
ENSFHEG00000005619aco19982.074ENSDNOG00000003951ACO19982.074Dasypus_novemcinctus
ENSFHEG00000005619aco19982.619ENSDORG00000014246Aco19982.619Dipodomys_ordii
ENSFHEG00000005619aco18563.830ENSETEG00000012415-8563.830Echinops_telfairi
ENSFHEG00000005619aco19955.779ENSEBUG00000015441aco19755.779Eptatretus_burgeri
ENSFHEG00000005619aco19982.074ENSEASG00005004602ACO19982.074Equus_asinus_asinus
ENSFHEG00000005619aco19981.962ENSECAG00000014846ACO19981.962Equus_caballus
ENSFHEG00000005619aco19970.913ENSEEUG00000015174ACO19970.913Erinaceus_europaeus
ENSFHEG00000005619aco19984.814ENSELUG00000016812aco19784.814Esox_lucius
ENSFHEG00000005619aco19981.962ENSFCAG00000001293ACO19981.962Felis_catus
ENSFHEG00000005619aco19981.962ENSFALG00000001167ACO19981.962Ficedula_albicollis
ENSFHEG00000005619aco19982.054ENSFDAG00000016058ACO19982.054Fukomys_damarensis
ENSFHEG00000005619aco19982.638ENSGMOG00000005514aco19982.638Gadus_morhua
ENSFHEG00000005619aco19981.962ENSGALG00000002162ACO19981.962Gallus_gallus
ENSFHEG00000005619aco110088.591ENSGACG00000001637aco110088.591Gasterosteus_aculeatus
ENSFHEG00000005619aco19981.398ENSGAGG00000023315ACO19981.398Gopherus_agassizii
ENSFHEG00000005619aco19982.413ENSGGOG00000016306ACO19982.413Gorilla_gorilla
ENSFHEG00000005619aco110088.255ENSHBUG00000008952aco110088.255Haplochromis_burtoni
ENSFHEG00000005619aco19981.941ENSHGLG00000018922Aco19981.941Heterocephalus_glaber_female
ENSFHEG00000005619aco19981.941ENSHGLG00100000149Aco19981.941Heterocephalus_glaber_male
ENSFHEG00000005619aco110084.452ENSHCOG00000015881aco110084.452Hippocampus_comes
ENSFHEG00000005619aco19985.264ENSIPUG00000020088ACO19985.264Ictalurus_punctatus
ENSFHEG00000005619aco19982.638ENSSTOG00000006942ACO19982.638Ictidomys_tridecemlineatus
ENSFHEG00000005619aco19982.525ENSJJAG00000013824Aco19982.525Jaculus_jaculus
ENSFHEG00000005619aco110089.038ENSKMAG00000015759aco110089.038Kryptolebias_marmoratus
ENSFHEG00000005619aco110084.693ENSLBEG00000013866aco110084.693Labrus_bergylta
ENSFHEG00000005619aco17569.481ENSLACG00000000936ACO19969.300Latimeria_chalumnae
ENSFHEG00000005619aco19982.957ENSLOCG00000011082aco19982.957Lepisosteus_oculatus
ENSFHEG00000005619aco19979.820ENSLAFG00000013470ACO19979.820Loxodonta_africana
ENSFHEG00000005619aco19982.413ENSMFAG00000001702ACO19982.413Macaca_fascicularis
ENSFHEG00000005619aco19982.525ENSMMUG00000008196ACO19982.525Macaca_mulatta
ENSFHEG00000005619aco19982.413ENSMNEG00000045040ACO19982.413Macaca_nemestrina
ENSFHEG00000005619aco19982.525ENSMLEG00000005636ACO19982.525Mandrillus_leucophaeus
ENSFHEG00000005619aco110089.821ENSMAMG00000002915aco110089.821Mastacembelus_armatus
ENSFHEG00000005619aco19985.410ENSMZEG00005012733aco110084.838Maylandia_zebra
ENSFHEG00000005619aco19967.565ENSMGAG00000008851ACO19967.000Meleagris_gallopavo
ENSFHEG00000005619aco19982.638ENSMAUG00000021408Aco19982.638Mesocricetus_auratus
ENSFHEG00000005619aco19982.187ENSMICG00000006540ACO19982.187Microcebus_murinus
ENSFHEG00000005619aco19983.089ENSMOCG00000015393Aco19983.089Microtus_ochrogaster
ENSFHEG00000005619aco110088.341ENSMMOG00000020282aco110088.341Mola_mola
ENSFHEG00000005619aco19981.285ENSMODG00000004463ACO19981.285Monodelphis_domestica
ENSFHEG00000005619aco110088.926ENSMALG00000019764aco110088.926Monopterus_albus
ENSFHEG00000005619aco19982.864MGP_CAROLIEiJ_G0025892Aco19982.864Mus_caroli
ENSFHEG00000005619aco19982.864ENSMUSG00000028405Aco19982.864Mus_musculus
ENSFHEG00000005619aco19982.976MGP_PahariEiJ_G0024015Aco19982.976Mus_pahari
ENSFHEG00000005619aco19983.202MGP_SPRETEiJ_G0026841Aco19983.202Mus_spretus
ENSFHEG00000005619aco19982.300ENSMPUG00000004340ACO19982.300Mustela_putorius_furo
ENSFHEG00000005619aco19980.496ENSMLUG00000003029ACO19980.496Myotis_lucifugus
ENSFHEG00000005619aco19981.736ENSNGAG00000005703Aco19981.736Nannospalax_galili
ENSFHEG00000005619aco110070.556ENSNBRG00000008973aco110070.333Neolamprologus_brichardi
ENSFHEG00000005619aco19982.187ENSNLEG00000003409ACO19982.187Nomascus_leucogenys
ENSFHEG00000005619aco18974.600ENSMEUG00000014756ACO18974.600Notamacropus_eugenii
ENSFHEG00000005619aco19978.241ENSOPRG00000016791ACO19978.241Ochotona_princeps
ENSFHEG00000005619aco19976.637ENSODEG00000015432-9976.185Octodon_degus
ENSFHEG00000005619aco19979.120ENSODEG00000001240-9979.120Octodon_degus
ENSFHEG00000005619aco110088.367ENSONIG00000019869aco110088.367Oreochromis_niloticus
ENSFHEG00000005619aco18182.271ENSOANG00000012132ACO19982.271Ornithorhynchus_anatinus
ENSFHEG00000005619aco19981.940ENSOCUG00000015960ACO19981.717Oryctolagus_cuniculus
ENSFHEG00000005619aco19988.851ENSORLG00000020656aco19988.851Oryzias_latipes
ENSFHEG00000005619aco19988.514ENSORLG00020010991aco19988.514Oryzias_latipes_hni
ENSFHEG00000005619aco110088.031ENSORLG00015011785aco110088.031Oryzias_latipes_hsok
ENSFHEG00000005619aco19987.162ENSOMEG00000000660aco19987.162Oryzias_melastigma
ENSFHEG00000005619aco19982.525ENSOGAG00000010522ACO19982.525Otolemur_garnettii
ENSFHEG00000005619aco19982.187ENSOARG00000014707ACO19981.930Ovis_aries
ENSFHEG00000005619aco19982.525ENSPPAG00000033498ACO19982.525Pan_paniscus
ENSFHEG00000005619aco19981.849ENSPPRG00000009875ACO19981.849Panthera_pardus
ENSFHEG00000005619aco19981.736ENSPTIG00000016606ACO19981.481Panthera_tigris_altaica
ENSFHEG00000005619aco19982.525ENSPTRG00000020843ACO19982.525Pan_troglodytes
ENSFHEG00000005619aco19982.525ENSPANG00000025270ACO19982.525Papio_anubis
ENSFHEG00000005619aco19982.187ENSPKIG00000023168aco19982.187Paramormyrops_kingsleyae
ENSFHEG00000005619aco19981.962ENSPSIG00000008030ACO19981.962Pelodiscus_sinensis
ENSFHEG00000005619aco110087.808ENSPMGG00000020708aco110087.808Periophthalmus_magnuspinnatus
ENSFHEG00000005619aco19982.525ENSPEMG00000018464Aco19982.525Peromyscus_maniculatus_bairdii
ENSFHEG00000005619aco19980.474ENSPCIG00000029321ACO19981.296Phascolarctos_cinereus
ENSFHEG00000005619aco110091.051ENSPFOG00000013405aco19991.383Poecilia_formosa
ENSFHEG00000005619aco19091.760ENSPLAG00000023422aco19891.760Poecilia_latipinna
ENSFHEG00000005619aco19091.656ENSPMEG00000011800aco19891.656Poecilia_mexicana
ENSFHEG00000005619aco110091.611ENSPREG00000021791aco110091.611Poecilia_reticulata
ENSFHEG00000005619aco19982.187ENSPPYG00000019150ACO19582.187Pongo_abelii
ENSFHEG00000005619aco17783.962ENSPCAG00000013222ACO19183.962Procavia_capensis
ENSFHEG00000005619aco18883.270ENSPCOG00000021198ACO19983.270Propithecus_coquereli
ENSFHEG00000005619aco19676.698ENSPVAG00000002372ACO19976.698Pteropus_vampyrus
ENSFHEG00000005619aco110088.255ENSPNYG00000009425aco110088.255Pundamilia_nyererei
ENSFHEG00000005619aco19985.473ENSPNAG00000017918aco19985.473Pygocentrus_nattereri
ENSFHEG00000005619aco19982.413ENSRNOG00000005849Aco19982.413Rattus_norvegicus
ENSFHEG00000005619aco19982.300ENSRBIG00000034592ACO19982.300Rhinopithecus_bieti
ENSFHEG00000005619aco19982.413ENSRROG00000042672ACO19982.413Rhinopithecus_roxellana
ENSFHEG00000005619aco19981.962ENSSBOG00000026008ACO19981.962Saimiri_boliviensis_boliviensis
ENSFHEG00000005619aco19981.060ENSSHAG00000008924ACO19981.060Sarcophilus_harrisii
ENSFHEG00000005619aco19983.070ENSSFOG00015018941aco19983.070Scleropages_formosus
ENSFHEG00000005619aco17589.866ENSSMAG00000018908aco18089.805Scophthalmus_maximus
ENSFHEG00000005619aco110089.374ENSSDUG00000002984aco110089.374Seriola_dumerili
ENSFHEG00000005619aco110089.262ENSSLDG00000013952aco110089.262Seriola_lalandi_dorsalis
ENSFHEG00000005619aco19679.883ENSSARG00000008437ACO19979.883Sorex_araneus
ENSFHEG00000005619aco19981.038ENSSPUG00000002916ACO19981.038Sphenodon_punctatus
ENSFHEG00000005619aco110089.150ENSSPAG00000019147aco110089.150Stegastes_partitus
ENSFHEG00000005619aco19981.962ENSSSCG00000023807ACO19981.962Sus_scrofa
ENSFHEG00000005619aco19981.849ENSTGUG00000001505ACO19981.849Taeniopygia_guttata
ENSFHEG00000005619aco19984.572ENSTRUG00000006888aco110084.400Takifugu_rubripes
ENSFHEG00000005619aco19982.300ENSTNIG00000005288aco19982.300Tetraodon_nigroviridis
ENSFHEG00000005619aco19978.918ENSTBEG00000012369ACO19978.918Tupaia_belangeri
ENSFHEG00000005619aco19982.300ENSTTRG00000016991ACO19982.300Tursiops_truncatus
ENSFHEG00000005619aco19982.187ENSUAMG00000020699ACO19982.187Ursus_americanus
ENSFHEG00000005619aco19982.187ENSUMAG00000005807ACO19982.187Ursus_maritimus
ENSFHEG00000005619aco19581.904ENSVPAG00000009876ACO19981.904Vicugna_pacos
ENSFHEG00000005619aco19982.074ENSVVUG00000021152ACO19182.074Vulpes_vulpes
ENSFHEG00000005619aco19980.247ENSXETG00000009184aco19980.247Xenopus_tropicalis
ENSFHEG00000005619aco15093.213ENSXCOG00000005638aco19693.213Xiphophorus_couchianus
ENSFHEG00000005619aco19991.892ENSXMAG00000023603aco19991.892Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us