EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000005732 (Gene tree)
Gene ID: -
Gene Symbol: scrt2
Alias: fc69h09|wu:fc69h09|zgc:162551
Full Name: transcriptional repressor scratch 1
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 4903 bases
Position: chrKN811448.1:2257113-2262015
Accession: 105935302
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000004774	zf-C2H2	PF00096.26	1.3e-25	1	4
ENSFHEP00000004774	zf-C2H2	PF00096.26	1.3e-25	2	4
ENSFHEP00000004774	zf-C2H2	PF00096.26	1.3e-25	3	4
ENSFHEP00000004774	zf-C2H2	PF00096.26	1.3e-25	4	4
ENSFHEP00000004777	zf-C2H2	PF00096.26	1.4e-25	1	4
ENSFHEP00000004777	zf-C2H2	PF00096.26	1.4e-25	2	4
ENSFHEP00000004777	zf-C2H2	PF00096.26	1.4e-25	3	4
ENSFHEP00000004777	zf-C2H2	PF00096.26	1.4e-25	4	4
ENSFHEP00000004774	zf-met	PF12874.7	5.5e-09	1	1
ENSFHEP00000004777	zf-met	PF12874.7	5.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000008269	-	846	XM_012875646	ENSFHEP00000004777	281 (aa)	XP_012731100	-
ENSFHET00000008278	-	831	-	ENSFHEP00000004774	276 (aa)	-	-

Gene Model

Click here to download ENSFHEG00000005732's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000005732's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000005732	scrt2	95	39.927	ENSFHEG00000012561	snai2	98	40.727
ENSFHEG00000005732	scrt2	57	47.977	ENSFHEG00000022095	-	99	38.542
ENSFHEG00000005732	scrt2	96	65.172	ENSFHEG00000009794	-	97	65.172
ENSFHEG00000005732	scrt2	96	71.014	ENSFHEG00000014820	scrt1b	96	71.014

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000005732	scrt2	96	65.724	ENSAPOG00000015197	-	97	65.724	Acanthochromis_polyacanthus
ENSFHEG00000005732	scrt2	96	71.377	ENSAPOG00000009279	scrt1b	96	71.377	Acanthochromis_polyacanthus
ENSFHEG00000005732	scrt2	100	95.374	ENSAPOG00000003680	scrt2	100	95.374	Acanthochromis_polyacanthus
ENSFHEG00000005732	scrt2	100	62.058	ENSACIG00000001296	-	100	62.379	Amphilophus_citrinellus
ENSFHEG00000005732	scrt2	96	64.828	ENSACIG00000006586	-	97	64.828	Amphilophus_citrinellus
ENSFHEG00000005732	scrt2	100	92.933	ENSACIG00000012604	scrt2	100	92.933	Amphilophus_citrinellus
ENSFHEG00000005732	scrt2	96	68.841	ENSACIG00000013613	scrt1b	96	68.841	Amphilophus_citrinellus
ENSFHEG00000005732	scrt2	96	64.483	ENSAOCG00000023304	-	97	64.483	Amphiprion_ocellaris
ENSFHEG00000005732	scrt2	100	95.374	ENSAOCG00000021557	scrt2	100	95.374	Amphiprion_ocellaris
ENSFHEG00000005732	scrt2	96	71.377	ENSAOCG00000003910	scrt1b	96	71.377	Amphiprion_ocellaris
ENSFHEG00000005732	scrt2	96	64.483	ENSAPEG00000005677	-	97	64.483	Amphiprion_percula
ENSFHEG00000005732	scrt2	96	71.377	ENSAPEG00000000869	scrt1b	96	71.377	Amphiprion_percula
ENSFHEG00000005732	scrt2	100	95.374	ENSAPEG00000022558	scrt2	100	95.374	Amphiprion_percula
ENSFHEG00000005732	scrt2	96	66.901	ENSATEG00000011660	-	97	66.901	Anabas_testudineus
ENSFHEG00000005732	scrt2	100	85.266	ENSATEG00000023998	scrt2	100	85.266	Anabas_testudineus
ENSFHEG00000005732	scrt2	96	71.739	ENSATEG00000002302	scrt1b	96	71.739	Anabas_testudineus
ENSFHEG00000005732	scrt2	100	57.576	ENSATEG00000003195	-	100	57.576	Anabas_testudineus
ENSFHEG00000005732	scrt2	78	75.115	ENSACAG00000016109	SCRT2	95	75.115	Anolis_carolinensis
ENSFHEG00000005732	scrt2	96	64.189	ENSACLG00000012046	-	97	64.189	Astatotilapia_calliptera
ENSFHEG00000005732	scrt2	96	71.014	ENSACLG00000007162	scrt1b	96	71.014	Astatotilapia_calliptera
ENSFHEG00000005732	scrt2	96	69.892	ENSAMXG00000042624	SCRT1	98	69.892	Astyanax_mexicanus
ENSFHEG00000005732	scrt2	88	87.550	ENSAMXG00000034158	scrt2	90	87.550	Astyanax_mexicanus
ENSFHEG00000005732	scrt2	96	71.739	ENSAMXG00000038085	scrt1a	97	71.739	Astyanax_mexicanus
ENSFHEG00000005732	scrt2	58	62.500	WBGene00000468	ces-1	59	62.500	Caenorhabditis_elegans
ENSFHEG00000005732	scrt2	86	63.672	ENSCPBG00000027613	SCRT2	100	63.672	Chrysemys_picta_bellii
ENSFHEG00000005732	scrt2	97	70.397	ENSCPBG00000018899	SCRT1	97	70.397	Chrysemys_picta_bellii
ENSFHEG00000005732	scrt2	100	82.132	ENSCSEG00000021542	scrt2	100	82.132	Cynoglossus_semilaevis
ENSFHEG00000005732	scrt2	96	71.014	ENSCSEG00000008596	scrt1b	96	71.014	Cynoglossus_semilaevis
ENSFHEG00000005732	scrt2	96	63.481	ENSCSEG00000014892	-	97	63.481	Cynoglossus_semilaevis
ENSFHEG00000005732	scrt2	96	71.739	ENSCVAG00000009561	scrt1b	96	71.739	Cyprinodon_variegatus
ENSFHEG00000005732	scrt2	99	64.000	ENSCVAG00000003190	-	100	64.000	Cyprinodon_variegatus
ENSFHEG00000005732	scrt2	100	86.834	ENSCVAG00000021038	scrt2	100	86.834	Cyprinodon_variegatus
ENSFHEG00000005732	scrt2	96	72.101	ENSDARG00000040214	scrt1b	97	72.101	Danio_rerio
ENSFHEG00000005732	scrt2	96	71.739	ENSDARG00000100821	scrt1a	97	71.739	Danio_rerio
ENSFHEG00000005732	scrt2	98	81.188	ENSELUG00000023883	scrt2	100	80.675	Esox_lucius
ENSFHEG00000005732	scrt2	96	71.273	ENSELUG00000022228	scrt1a	96	71.273	Esox_lucius
ENSFHEG00000005732	scrt2	96	71.377	ENSELUG00000005435	scrt1b	96	71.377	Esox_lucius
ENSFHEG00000005732	scrt2	85	69.456	ENSFALG00000005718	SCRT2	97	71.130	Ficedula_albicollis
ENSFHEG00000005732	scrt2	97	57.875	ENSFDAG00000008733	SCRT1	98	57.875	Fukomys_damarensis
ENSFHEG00000005732	scrt2	96	69.455	ENSGMOG00000000629	scrt1b	96	69.455	Gadus_morhua
ENSFHEG00000005732	scrt2	99	73.252	ENSGMOG00000019519	scrt2	99	73.252	Gadus_morhua
ENSFHEG00000005732	scrt2	96	64.516	ENSGALG00000028912	SCRT2	97	65.357	Gallus_gallus
ENSFHEG00000005732	scrt2	100	88.599	ENSGAFG00000003093	scrt2	100	88.599	Gambusia_affinis
ENSFHEG00000005732	scrt2	96	71.739	ENSGAFG00000007636	scrt1b	96	71.739	Gambusia_affinis
ENSFHEG00000005732	scrt2	99	63.701	ENSGAFG00000009650	-	100	63.701	Gambusia_affinis
ENSFHEG00000005732	scrt2	96	69.818	ENSGACG00000008982	scrt1b	96	69.818	Gasterosteus_aculeatus
ENSFHEG00000005732	scrt2	96	63.793	ENSGACG00000004072	-	97	63.793	Gasterosteus_aculeatus
ENSFHEG00000005732	scrt2	69	78.756	ENSGAGG00000020760	-	74	79.275	Gopherus_agassizii
ENSFHEG00000005732	scrt2	100	65.052	ENSGAGG00000020761	SCRT2	100	65.398	Gopherus_agassizii
ENSFHEG00000005732	scrt2	97	69.424	ENSGAGG00000011736	SCRT1	98	69.424	Gopherus_agassizii
ENSFHEG00000005732	scrt2	100	95.374	ENSHBUG00000012492	scrt2	100	95.374	Haplochromis_burtoni
ENSFHEG00000005732	scrt2	96	71.014	ENSHBUG00000016621	scrt1b	96	71.014	Haplochromis_burtoni
ENSFHEG00000005732	scrt2	96	64.384	ENSHBUG00000019101	-	97	64.384	Haplochromis_burtoni
ENSFHEG00000005732	scrt2	96	70.652	ENSHCOG00000016704	scrt1b	96	70.652	Hippocampus_comes
ENSFHEG00000005732	scrt2	96	64.286	ENSHCOG00000016179	-	97	64.643	Hippocampus_comes
ENSFHEG00000005732	scrt2	100	85.479	ENSHCOG00000008116	scrt2	100	85.479	Hippocampus_comes
ENSFHEG00000005732	scrt2	96	70.504	ENSIPUG00000004551	scrt1a	97	70.504	Ictalurus_punctatus
ENSFHEG00000005732	scrt2	96	68.773	ENSIPUG00000005547	-	98	68.773	Ictalurus_punctatus
ENSFHEG00000005732	scrt2	51	85.714	ENSSTOG00000032944	SCRT2	76	85.211	Ictidomys_tridecemlineatus
ENSFHEG00000005732	scrt2	96	71.739	ENSKMAG00000005484	scrt1b	96	71.739	Kryptolebias_marmoratus
ENSFHEG00000005732	scrt2	96	64.041	ENSKMAG00000009489	-	100	63.123	Kryptolebias_marmoratus
ENSFHEG00000005732	scrt2	100	85.580	ENSKMAG00000018087	scrt2	100	85.580	Kryptolebias_marmoratus
ENSFHEG00000005732	scrt2	96	63.793	ENSLBEG00000023388	-	97	64.138	Labrus_bergylta
ENSFHEG00000005732	scrt2	100	85.625	ENSLBEG00000015419	scrt2	100	85.625	Labrus_bergylta
ENSFHEG00000005732	scrt2	96	72.101	ENSLACG00000003588	SCRT1	96	72.101	Latimeria_chalumnae
ENSFHEG00000005732	scrt2	96	72.464	ENSLOCG00000007573	scrt1b	97	72.464	Lepisosteus_oculatus
ENSFHEG00000005732	scrt2	100	62.813	ENSLOCG00000002246	scrt2	100	63.125	Lepisosteus_oculatus
ENSFHEG00000005732	scrt2	96	71.014	ENSMAMG00000011698	scrt1b	96	71.014	Mastacembelus_armatus
ENSFHEG00000005732	scrt2	100	85.893	ENSMAMG00000001291	scrt2	100	85.893	Mastacembelus_armatus
ENSFHEG00000005732	scrt2	100	95.374	ENSMZEG00005026445	scrt2	100	95.374	Maylandia_zebra
ENSFHEG00000005732	scrt2	96	71.014	ENSMZEG00005005627	scrt1b	96	71.014	Maylandia_zebra
ENSFHEG00000005732	scrt2	96	64.384	ENSMZEG00005026702	-	97	64.384	Maylandia_zebra
ENSFHEG00000005732	scrt2	85	70.588	ENSMGAG00000016579	SCRT2	97	71.429	Meleagris_gallopavo
ENSFHEG00000005732	scrt2	99	86.032	ENSMMOG00000009272	scrt2	99	86.032	Mola_mola
ENSFHEG00000005732	scrt2	96	70.652	ENSMMOG00000003327	scrt1b	96	70.652	Mola_mola
ENSFHEG00000005732	scrt2	96	64.726	ENSMMOG00000018345	-	97	64.726	Mola_mola
ENSFHEG00000005732	scrt2	96	71.377	ENSMALG00000012704	scrt1b	96	71.377	Monopterus_albus
ENSFHEG00000005732	scrt2	100	88.421	ENSMALG00000013656	scrt2	100	88.421	Monopterus_albus
ENSFHEG00000005732	scrt2	96	55.094	ENSNGAG00000020815	Scrt2	99	53.650	Nannospalax_galili
ENSFHEG00000005732	scrt2	96	70.652	ENSNBRG00000013983	scrt1b	96	70.652	Neolamprologus_brichardi
ENSFHEG00000005732	scrt2	96	64.384	ENSNBRG00000014882	-	97	64.384	Neolamprologus_brichardi
ENSFHEG00000005732	scrt2	100	95.374	ENSNBRG00000007221	scrt2	100	95.374	Neolamprologus_brichardi
ENSFHEG00000005732	scrt2	96	70.652	ENSONIG00000006007	scrt1b	100	68.403	Oreochromis_niloticus
ENSFHEG00000005732	scrt2	99	65.385	ENSONIG00000003152	-	100	65.385	Oreochromis_niloticus
ENSFHEG00000005732	scrt2	96	62.013	ENSONIG00000019809	-	100	62.013	Oreochromis_niloticus
ENSFHEG00000005732	scrt2	100	85.580	ENSONIG00000016758	scrt2	100	85.580	Oreochromis_niloticus
ENSFHEG00000005732	scrt2	99	62.215	ENSORLG00000022825	-	100	62.215	Oryzias_latipes
ENSFHEG00000005732	scrt2	100	84.953	ENSORLG00000024051	scrt2	100	84.953	Oryzias_latipes
ENSFHEG00000005732	scrt2	96	71.377	ENSORLG00000025651	scrt1b	96	71.377	Oryzias_latipes
ENSFHEG00000005732	scrt2	96	71.377	ENSORLG00020012967	scrt1b	96	71.377	Oryzias_latipes_hni
ENSFHEG00000005732	scrt2	100	84.953	ENSORLG00020011478	scrt2	100	84.953	Oryzias_latipes_hni
ENSFHEG00000005732	scrt2	99	62.013	ENSORLG00015010104	-	100	62.013	Oryzias_latipes_hsok
ENSFHEG00000005732	scrt2	100	84.953	ENSORLG00015005524	scrt2	100	84.953	Oryzias_latipes_hsok
ENSFHEG00000005732	scrt2	96	71.377	ENSORLG00015019165	scrt1b	96	71.377	Oryzias_latipes_hsok
ENSFHEG00000005732	scrt2	100	85.266	ENSOMEG00000002661	scrt2	100	85.266	Oryzias_melastigma
ENSFHEG00000005732	scrt2	99	64.000	ENSOMEG00000000286	-	100	64.000	Oryzias_melastigma
ENSFHEG00000005732	scrt2	96	71.377	ENSOMEG00000003925	scrt1b	96	71.377	Oryzias_melastigma
ENSFHEG00000005732	scrt2	96	71.377	ENSPKIG00000020085	scrt1a	97	71.377	Paramormyrops_kingsleyae
ENSFHEG00000005732	scrt2	96	71.739	ENSPKIG00000022303	SCRT1	97	71.739	Paramormyrops_kingsleyae
ENSFHEG00000005732	scrt2	96	71.375	ENSPMGG00000002260	scrt1b	96	71.375	Periophthalmus_magnuspinnatus
ENSFHEG00000005732	scrt2	96	65.505	ENSPMGG00000021402	-	97	65.505	Periophthalmus_magnuspinnatus
ENSFHEG00000005732	scrt2	100	85.017	ENSPMGG00000016561	scrt2	100	85.017	Periophthalmus_magnuspinnatus
ENSFHEG00000005732	scrt2	100	87.461	ENSPFOG00000007738	scrt2	100	87.461	Poecilia_formosa
ENSFHEG00000005732	scrt2	99	63.880	ENSPFOG00000005616	-	100	63.880	Poecilia_formosa
ENSFHEG00000005732	scrt2	96	71.739	ENSPFOG00000017719	scrt1b	96	71.739	Poecilia_formosa
ENSFHEG00000005732	scrt2	100	97.895	ENSPLAG00000005765	scrt2	100	97.895	Poecilia_latipinna
ENSFHEG00000005732	scrt2	96	71.739	ENSPLAG00000009876	scrt1b	96	71.739	Poecilia_latipinna
ENSFHEG00000005732	scrt2	99	63.880	ENSPLAG00000011718	-	100	63.880	Poecilia_latipinna
ENSFHEG00000005732	scrt2	100	97.895	ENSPMEG00000001538	scrt2	100	97.895	Poecilia_mexicana
ENSFHEG00000005732	scrt2	96	71.739	ENSPMEG00000013274	scrt1b	96	71.739	Poecilia_mexicana
ENSFHEG00000005732	scrt2	99	63.880	ENSPMEG00000011706	-	100	63.880	Poecilia_mexicana
ENSFHEG00000005732	scrt2	96	71.739	ENSPREG00000018985	scrt1b	96	71.739	Poecilia_reticulata
ENSFHEG00000005732	scrt2	99	63.880	ENSPREG00000012166	-	100	63.880	Poecilia_reticulata
ENSFHEG00000005732	scrt2	100	87.147	ENSPREG00000001147	scrt2	100	87.147	Poecilia_reticulata
ENSFHEG00000005732	scrt2	96	71.014	ENSPNYG00000017733	scrt1b	96	71.014	Pundamilia_nyererei
ENSFHEG00000005732	scrt2	96	64.384	ENSPNYG00000008865	-	97	64.384	Pundamilia_nyererei
ENSFHEG00000005732	scrt2	100	95.374	ENSPNYG00000013109	scrt2	100	95.374	Pundamilia_nyererei
ENSFHEG00000005732	scrt2	96	71.739	ENSPNAG00000017415	scrt1a	97	71.739	Pygocentrus_nattereri
ENSFHEG00000005732	scrt2	96	69.675	ENSPNAG00000027880	-	98	69.675	Pygocentrus_nattereri
ENSFHEG00000005732	scrt2	96	70.652	ENSSFOG00015001195	SCRT1	97	70.652	Scleropages_formosus
ENSFHEG00000005732	scrt2	96	70.652	ENSSMAG00000019207	scrt1b	96	70.652	Scophthalmus_maximus
ENSFHEG00000005732	scrt2	96	63.605	ENSSMAG00000005122	-	97	63.605	Scophthalmus_maximus
ENSFHEG00000005732	scrt2	96	71.377	ENSSDUG00000007752	scrt1b	96	71.377	Seriola_dumerili
ENSFHEG00000005732	scrt2	96	64.948	ENSSDUG00000013215	-	97	64.948	Seriola_dumerili
ENSFHEG00000005732	scrt2	96	89.078	ENSSDUG00000001637	scrt2	95	89.078	Seriola_dumerili
ENSFHEG00000005732	scrt2	96	71.377	ENSSLDG00000017166	scrt1b	96	71.377	Seriola_lalandi_dorsalis
ENSFHEG00000005732	scrt2	100	86.207	ENSSLDG00000013565	scrt2	100	86.207	Seriola_lalandi_dorsalis
ENSFHEG00000005732	scrt2	96	64.948	ENSSLDG00000016454	-	97	64.948	Seriola_lalandi_dorsalis
ENSFHEG00000005732	scrt2	96	68.459	ENSSPUG00000018637	SCRT2	97	68.459	Sphenodon_punctatus
ENSFHEG00000005732	scrt2	96	64.828	ENSSPAG00000006788	-	97	64.828	Stegastes_partitus
ENSFHEG00000005732	scrt2	100	96.085	ENSSPAG00000014018	scrt2	100	96.085	Stegastes_partitus
ENSFHEG00000005732	scrt2	96	71.377	ENSSPAG00000002200	scrt1b	96	71.377	Stegastes_partitus
ENSFHEG00000005732	scrt2	85	69.328	ENSTGUG00000006801	SCRT2	99	71.008	Taeniopygia_guttata
ENSFHEG00000005732	scrt2	99	89.000	ENSTRUG00000007620	scrt2	99	89.000	Takifugu_rubripes
ENSFHEG00000005732	scrt2	96	64.605	ENSTRUG00000012719	-	97	64.948	Takifugu_rubripes
ENSFHEG00000005732	scrt2	96	70.182	ENSTRUG00000011637	scrt1b	97	70.182	Takifugu_rubripes
ENSFHEG00000005732	scrt2	85	68.487	ENSTRUG00000019558	-	78	68.908	Takifugu_rubripes
ENSFHEG00000005732	scrt2	96	70.545	ENSTNIG00000018384	scrt1b	96	70.545	Tetraodon_nigroviridis
ENSFHEG00000005732	scrt2	99	90.278	ENSTNIG00000012473	scrt2	100	90.278	Tetraodon_nigroviridis
ENSFHEG00000005732	scrt2	100	88.599	ENSXCOG00000014367	scrt2	100	88.599	Xiphophorus_couchianus
ENSFHEG00000005732	scrt2	99	63.345	ENSXCOG00000019861	-	100	63.345	Xiphophorus_couchianus
ENSFHEG00000005732	scrt2	96	71.739	ENSXCOG00000019675	scrt1b	96	71.739	Xiphophorus_couchianus
ENSFHEG00000005732	scrt2	96	71.739	ENSXMAG00000027885	scrt1b	96	71.739	Xiphophorus_maculatus
ENSFHEG00000005732	scrt2	100	86.834	ENSXMAG00000028567	scrt2	100	86.834	Xiphophorus_maculatus
ENSFHEG00000005732	scrt2	99	63.545	ENSXMAG00000015353	-	100	63.545	Xiphophorus_maculatus