EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000005791 (Gene tree)
Gene ID: 105937541
Gene Symbol: gpatch8
Alias: fa12a04|fb30h12|gpatc8|wu:fa12a04|wu:fb30h12|wu:fj32a09
Full Name: G-patch domain containing 8
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 32654 bases
Position: chrKN805614.1:509743-542396
Accession: 105937541
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000024297	zf-C2H2_jaz	PF12171.8	5.3e-06	1	1
ENSFHEP00000004870	zf-C2H2_jaz	PF12171.8	5.7e-06	1	1
ENSFHEP00000004870	G-patch	PF01585.23	2.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000008112	-	8097	XM_012878902	ENSFHEP00000004870	1484 (aa)	XP_012734356	UPI000644903A
ENSFHET00000008124	-	7516	XM_012878924	ENSFHEP00000024297	1405 (aa)	XP_012734378	UPI00064500FC

Gene Model

Click here to download ENSFHEG00000005791's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000005791's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000005791	gpatch8	100	81.933	ENSAPOG00000023938	gpatch8	56	76.675	Acanthochromis_polyacanthus
ENSFHEG00000005791	gpatch8	100	79.973	ENSACIG00000012241	gpatch8	55	73.421	Amphilophus_citrinellus
ENSFHEG00000005791	gpatch8	100	82.478	ENSAOCG00000018102	gpatch8	56	76.344	Amphiprion_ocellaris
ENSFHEG00000005791	gpatch8	100	82.412	ENSAPEG00000016776	gpatch8	56	76.225	Amphiprion_percula
ENSFHEG00000005791	gpatch8	100	78.467	ENSATEG00000003247	gpatch8	55	71.737	Anabas_testudineus
ENSFHEG00000005791	gpatch8	100	80.387	ENSACLG00000004165	gpatch8	56	73.086	Astatotilapia_calliptera
ENSFHEG00000005791	gpatch8	99	62.468	ENSAMXG00000041683	gpatch8	56	61.581	Astyanax_mexicanus
ENSFHEG00000005791	gpatch8	100	76.514	ENSCSEG00000021277	gpatch8	55	67.981	Cynoglossus_semilaevis
ENSFHEG00000005791	gpatch8	100	85.400	ENSCVAG00000013477	gpatch8	100	84.990	Cyprinodon_variegatus
ENSFHEG00000005791	gpatch8	100	62.370	ENSDARG00000059768	gpatch8	56	58.995	Danio_rerio
ENSFHEG00000005791	gpatch8	100	63.318	ENSELUG00000019920	gpatch8	57	62.414	Esox_lucius
ENSFHEG00000005791	gpatch8	100	80.493	ENSHBUG00000002669	gpatch8	56	73.421	Haplochromis_burtoni
ENSFHEG00000005791	gpatch8	71	55.435	ENSHGLG00100010738	GPATCH8	95	55.346	Heterocephalus_glaber_male
ENSFHEG00000005791	gpatch8	100	71.400	ENSHCOG00000017518	gpatch8	56	66.507	Hippocampus_comes
ENSFHEG00000005791	gpatch8	59	61.105	ENSIPUG00000015431	gpatch8	55	60.981	Ictalurus_punctatus
ENSFHEG00000005791	gpatch8	100	78.007	ENSLBEG00000023352	gpatch8	56	71.599	Labrus_bergylta
ENSFHEG00000005791	gpatch8	60	81.897	ENSLOCG00000012265	gpatch8	71	76.596	Lepisosteus_oculatus
ENSFHEG00000005791	gpatch8	100	79.466	ENSMAMG00000001618	gpatch8	54	72.014	Mastacembelus_armatus
ENSFHEG00000005791	gpatch8	100	80.387	ENSMZEG00005022584	gpatch8	56	72.967	Maylandia_zebra
ENSFHEG00000005791	gpatch8	56	74.556	ENSMMOG00000020472	gpatch8	55	74.255	Mola_mola
ENSFHEG00000005791	gpatch8	50	62.428	ENSMLUG00000013840	GPATCH8	53	62.722	Myotis_lucifugus
ENSFHEG00000005791	gpatch8	100	80.692	ENSNBRG00000016402	gpatch8	56	73.063	Neolamprologus_brichardi
ENSFHEG00000005791	gpatch8	100	78.424	ENSONIG00000001292	gpatch8	55	70.264	Oreochromis_niloticus
ENSFHEG00000005791	gpatch8	56	72.479	ENSORLG00000028497	gpatch8	56	71.667	Oryzias_latipes
ENSFHEG00000005791	gpatch8	61	73.673	ENSORLG00020006656	gpatch8	56	71.395	Oryzias_latipes_hni
ENSFHEG00000005791	gpatch8	56	72.479	ENSORLG00015019797	gpatch8	56	71.548	Oryzias_latipes_hsok
ENSFHEG00000005791	gpatch8	56	72.912	ENSOMEG00000023809	gpatch8	56	73.413	Oryzias_melastigma
ENSFHEG00000005791	gpatch8	52	56.091	ENSPKIG00000018753	gpatch8	56	51.455	Paramormyrops_kingsleyae
ENSFHEG00000005791	gpatch8	100	74.717	ENSPMGG00000000730	gpatch8	55	65.595	Periophthalmus_magnuspinnatus
ENSFHEG00000005791	gpatch8	100	80.187	ENSPNYG00000009426	gpatch8	56	73.086	Pundamilia_nyererei
ENSFHEG00000005791	gpatch8	59	60.912	ENSPNAG00000016200	gpatch8	58	61.822	Pygocentrus_nattereri
ENSFHEG00000005791	gpatch8	56	57.913	ENSSFOG00015004299	GPATCH8	55	57.126	Scleropages_formosus
ENSFHEG00000005791	gpatch8	55	56.738	ENSSFOG00015021377	-	55	56.184	Scleropages_formosus
ENSFHEG00000005791	gpatch8	100	80.181	ENSSDUG00000018065	gpatch8	53	72.809	Seriola_dumerili
ENSFHEG00000005791	gpatch8	100	81.764	ENSSLDG00000009225	gpatch8	56	74.970	Seriola_lalandi_dorsalis
ENSFHEG00000005791	gpatch8	100	82.012	ENSSPAG00000011368	gpatch8	56	75.627	Stegastes_partitus
ENSFHEG00000005791	gpatch8	100	75.149	ENSTRUG00000020474	gpatch8	55	68.339	Takifugu_rubripes
ENSFHEG00000005791	gpatch8	57	61.818	ENSTBEG00000009486	GPATCH8	55	61.091	Tupaia_belangeri
ENSFHEG00000005791	gpatch8	55	80.552	ENSXCOG00000016680	gpatch8	56	80.502	Xiphophorus_couchianus
ENSFHEG00000005791	gpatch8	55	80.866	ENSXMAG00000009217	gpatch8	56	80.935	Xiphophorus_maculatus