EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000005847 (Gene tree)
Gene ID: 105933535
Gene Symbol: si:ch211-256m1.8
Alias: -
Full Name: uncharacterized LOC105933535
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 8182 bases
Position: chrKN811408.1:44335-52516
Accession: 105933535
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000004941	tRNA-synt_2	PF00152.20	9.7e-30	1	1
ENSFHEP00000024350	tRNA-synt_2	PF00152.20	1.2e-29	1	1
ENSFHEP00000004927	tRNA-synt_2	PF00152.20	1.2e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000008024	-	5289	XM_012873123	ENSFHEP00000004927	1578 (aa)	XP_012728577	A0A146P7J7
ENSFHET00000008013	-	5385	-	ENSFHEP00000004941	1384 (aa)	-	-
ENSFHET00000008019	-	5206	-	ENSFHEP00000024350	1555 (aa)	-	-

Gene Model

Click here to download ENSFHEG00000005847's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000005847's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000005847	si:ch211-256m1.8	100	74.747	ENSAPOG00000007012	si:ch211-256m1.8	100	74.747	Acanthochromis_polyacanthus
ENSFHEG00000005847	si:ch211-256m1.8	100	74.858	ENSAOCG00000012258	si:ch211-256m1.8	100	74.858	Amphiprion_ocellaris
ENSFHEG00000005847	si:ch211-256m1.8	100	74.858	ENSAPEG00000002724	si:ch211-256m1.8	100	74.858	Amphiprion_percula
ENSFHEG00000005847	si:ch211-256m1.8	100	75.742	ENSATEG00000006278	si:ch211-256m1.8	100	75.742	Anabas_testudineus
ENSFHEG00000005847	si:ch211-256m1.8	100	75.648	ENSACLG00000011503	si:ch211-256m1.8	100	75.648	Astatotilapia_calliptera
ENSFHEG00000005847	si:ch211-256m1.8	100	66.929	ENSAMXG00000038245	si:ch211-256m1.8	100	66.897	Astyanax_mexicanus
ENSFHEG00000005847	si:ch211-256m1.8	100	72.159	ENSCSEG00000006255	si:ch211-256m1.8	100	72.159	Cynoglossus_semilaevis
ENSFHEG00000005847	si:ch211-256m1.8	100	84.104	ENSCVAG00000003376	si:ch211-256m1.8	100	84.104	Cyprinodon_variegatus
ENSFHEG00000005847	si:ch211-256m1.8	100	64.070	ENSDARG00000055172	si:ch211-256m1.8	100	64.070	Danio_rerio
ENSFHEG00000005847	si:ch211-256m1.8	100	66.708	ENSELUG00000010546	si:ch211-256m1.8	100	66.708	Esox_lucius
ENSFHEG00000005847	si:ch211-256m1.8	100	86.004	ENSGAFG00000010269	si:ch211-256m1.8	100	86.004	Gambusia_affinis
ENSFHEG00000005847	si:ch211-256m1.8	100	75.838	ENSHBUG00000014407	si:ch211-256m1.8	100	75.838	Haplochromis_burtoni
ENSFHEG00000005847	si:ch211-256m1.8	100	70.234	ENSHCOG00000006884	si:ch211-256m1.8	100	71.228	Hippocampus_comes
ENSFHEG00000005847	si:ch211-256m1.8	100	65.277	ENSIPUG00000022659	si:ch211-256m1.8	100	64.691	Ictalurus_punctatus
ENSFHEG00000005847	si:ch211-256m1.8	100	78.594	ENSKMAG00000016377	si:ch211-256m1.8	100	78.594	Kryptolebias_marmoratus
ENSFHEG00000005847	si:ch211-256m1.8	100	75.742	ENSLBEG00000010639	si:ch211-256m1.8	100	75.742	Labrus_bergylta
ENSFHEG00000005847	si:ch211-256m1.8	99	60.014	ENSLOCG00000011127	si:ch211-256m1.8	100	58.610	Lepisosteus_oculatus
ENSFHEG00000005847	si:ch211-256m1.8	100	75.111	ENSMAMG00000005651	si:ch211-256m1.8	100	75.111	Mastacembelus_armatus
ENSFHEG00000005847	si:ch211-256m1.8	100	75.648	ENSMZEG00005006924	si:ch211-256m1.8	100	75.648	Maylandia_zebra
ENSFHEG00000005847	si:ch211-256m1.8	100	71.293	ENSMMOG00000001736	si:ch211-256m1.8	100	71.293	Mola_mola
ENSFHEG00000005847	si:ch211-256m1.8	100	75.648	ENSNBRG00000005143	si:ch211-256m1.8	100	75.648	Neolamprologus_brichardi
ENSFHEG00000005847	si:ch211-256m1.8	100	74.224	ENSORLG00000022248	si:ch211-256m1.8	100	74.224	Oryzias_latipes
ENSFHEG00000005847	si:ch211-256m1.8	100	73.908	ENSORLG00020000214	si:ch211-256m1.8	100	73.908	Oryzias_latipes_hni
ENSFHEG00000005847	si:ch211-256m1.8	100	74.018	ENSORLG00015020297	si:ch211-256m1.8	100	74.018	Oryzias_latipes_hsok
ENSFHEG00000005847	si:ch211-256m1.8	100	74.351	ENSOMEG00000004519	si:ch211-256m1.8	100	74.351	Oryzias_melastigma
ENSFHEG00000005847	si:ch211-256m1.8	95	64.922	ENSPKIG00000007399	si:ch211-256m1.8	99	64.922	Paramormyrops_kingsleyae
ENSFHEG00000005847	si:ch211-256m1.8	99	67.675	ENSPMGG00000007698	si:ch211-256m1.8	100	65.404	Periophthalmus_magnuspinnatus
ENSFHEG00000005847	si:ch211-256m1.8	100	86.320	ENSPFOG00000005178	si:ch211-256m1.8	100	86.320	Poecilia_formosa
ENSFHEG00000005847	si:ch211-256m1.8	100	86.067	ENSPLAG00000006872	si:ch211-256m1.8	100	86.067	Poecilia_latipinna
ENSFHEG00000005847	si:ch211-256m1.8	100	86.320	ENSPMEG00000021815	si:ch211-256m1.8	100	86.320	Poecilia_mexicana
ENSFHEG00000005847	si:ch211-256m1.8	100	86.004	ENSPREG00000018669	si:ch211-256m1.8	100	86.004	Poecilia_reticulata
ENSFHEG00000005847	si:ch211-256m1.8	100	75.712	ENSPNYG00000018038	si:ch211-256m1.8	100	75.712	Pundamilia_nyererei
ENSFHEG00000005847	si:ch211-256m1.8	99	66.354	ENSPNAG00000018965	-	99	65.765	Pygocentrus_nattereri
ENSFHEG00000005847	si:ch211-256m1.8	99	67.507	ENSPNAG00000003552	si:ch211-256m1.8	99	66.750	Pygocentrus_nattereri
ENSFHEG00000005847	si:ch211-256m1.8	99	63.741	ENSSFOG00015008344	si:ch211-256m1.8	99	62.736	Scleropages_formosus
ENSFHEG00000005847	si:ch211-256m1.8	100	75.503	ENSSMAG00000007562	si:ch211-256m1.8	100	75.473	Scophthalmus_maximus
ENSFHEG00000005847	si:ch211-256m1.8	100	77.644	ENSSDUG00000018180	si:ch211-256m1.8	100	77.644	Seriola_dumerili
ENSFHEG00000005847	si:ch211-256m1.8	100	77.454	ENSSLDG00000020310	si:ch211-256m1.8	100	77.454	Seriola_lalandi_dorsalis
ENSFHEG00000005847	si:ch211-256m1.8	100	75.773	ENSSPAG00000013419	si:ch211-256m1.8	100	75.805	Stegastes_partitus
ENSFHEG00000005847	si:ch211-256m1.8	99	68.660	ENSTRUG00000023803	si:ch211-256m1.8	100	67.486	Takifugu_rubripes
ENSFHEG00000005847	si:ch211-256m1.8	100	86.384	ENSXCOG00000017726	si:ch211-256m1.8	100	86.384	Xiphophorus_couchianus
ENSFHEG00000005847	si:ch211-256m1.8	100	86.257	ENSXMAG00000026576	si:ch211-256m1.8	100	86.257	Xiphophorus_maculatus