EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000006004 (Gene tree)
Gene ID: 105939157
Gene Symbol: srprb
Alias: wu:fk57h10|zgc:111820|zgc:92746
Full Name: SRP receptor subunit beta
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 6794 bases
Position: chrKN811559.1:799268-806061
Accession: 105939157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000024435	MMR_HSR1	PF01926.23	6.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000007805	-	801	XM_012881222	ENSFHEP00000024435	266 (aa)	XP_012736676	UPI0006449100

Gene Model

Click here to download ENSFHEG00000006004's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000006004's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000006004	srprb	64	31.579	ENSFHEG00000005859	-	88	31.579
ENSFHEG00000006004	srprb	71	30.851	ENSFHEG00000023396	-	96	30.851
ENSFHEG00000006004	srprb	60	31.875	ENSFHEG00000019002	arf2b	87	31.579
ENSFHEG00000006004	srprb	64	30.994	ENSFHEG00000011714	-	88	30.994
ENSFHEG00000006004	srprb	71	30.851	ENSFHEG00000008118	arf3b	96	30.851

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000006004	srprb	98	90.038	ENSAPOG00000021219	srprb	94	90.038	Acanthochromis_polyacanthus
ENSFHEG00000006004	srprb	100	86.842	ENSACIG00000014621	srprb	100	86.842	Amphilophus_citrinellus
ENSFHEG00000006004	srprb	100	86.940	ENSAOCG00000017265	srprb	97	86.940	Amphiprion_ocellaris
ENSFHEG00000006004	srprb	100	86.940	ENSAPEG00000024541	srprb	86	86.940	Amphiprion_percula
ENSFHEG00000006004	srprb	100	86.466	ENSATEG00000014016	srprb	97	86.466	Anabas_testudineus
ENSFHEG00000006004	srprb	100	87.640	ENSACLG00000016748	srprb	97	87.640	Astatotilapia_calliptera
ENSFHEG00000006004	srprb	100	69.173	ENSAMXG00000044118	srprb	100	69.173	Astyanax_mexicanus
ENSFHEG00000006004	srprb	100	83.459	ENSCSEG00000017194	srprb	97	83.459	Cynoglossus_semilaevis
ENSFHEG00000006004	srprb	100	91.729	ENSCVAG00000004221	srprb	100	91.729	Cyprinodon_variegatus
ENSFHEG00000006004	srprb	100	68.797	ENSDARG00000030949	srprb	100	68.797	Danio_rerio
ENSFHEG00000006004	srprb	97	81.081	ENSELUG00000009740	srprb	96	81.081	Esox_lucius
ENSFHEG00000006004	srprb	95	86.561	ENSGMOG00000002081	srprb	94	86.561	Gadus_morhua
ENSFHEG00000006004	srprb	99	92.045	ENSGAFG00000012593	srprb	99	92.045	Gambusia_affinis
ENSFHEG00000006004	srprb	100	86.842	ENSGACG00000009891	srprb	98	86.842	Gasterosteus_aculeatus
ENSFHEG00000006004	srprb	100	87.640	ENSHBUG00000002145	srprb	97	87.640	Haplochromis_burtoni
ENSFHEG00000006004	srprb	100	83.459	ENSHCOG00000007732	srprb	99	83.459	Hippocampus_comes
ENSFHEG00000006004	srprb	100	65.169	ENSIPUG00000004177	srprb	100	65.169	Ictalurus_punctatus
ENSFHEG00000006004	srprb	100	86.466	ENSKMAG00000020736	srprb	100	86.466	Kryptolebias_marmoratus
ENSFHEG00000006004	srprb	100	87.218	ENSLBEG00000021483	srprb	97	87.218	Labrus_bergylta
ENSFHEG00000006004	srprb	99	70.566	ENSLOCG00000009740	srprb	89	69.057	Lepisosteus_oculatus
ENSFHEG00000006004	srprb	100	87.594	ENSMAMG00000011876	srprb	97	87.594	Mastacembelus_armatus
ENSFHEG00000006004	srprb	97	88.417	ENSMZEG00005016621	srprb	100	88.417	Maylandia_zebra
ENSFHEG00000006004	srprb	100	87.218	ENSMMOG00000012550	srprb	98	87.218	Mola_mola
ENSFHEG00000006004	srprb	100	88.346	ENSMALG00000012595	srprb	97	88.346	Monopterus_albus
ENSFHEG00000006004	srprb	74	87.817	ENSNBRG00000004699	srprb	84	87.817	Neolamprologus_brichardi
ENSFHEG00000006004	srprb	100	88.346	ENSONIG00000003788	srprb	79	88.346	Oreochromis_niloticus
ENSFHEG00000006004	srprb	100	82.331	ENSORLG00000006430	srprb	97	82.331	Oryzias_latipes
ENSFHEG00000006004	srprb	100	82.707	ENSORLG00020003413	srprb	97	82.707	Oryzias_latipes_hni
ENSFHEG00000006004	srprb	100	82.707	ENSORLG00015000166	srprb	97	82.707	Oryzias_latipes_hsok
ENSFHEG00000006004	srprb	100	83.835	ENSOMEG00000012735	srprb	97	83.835	Oryzias_melastigma
ENSFHEG00000006004	srprb	94	72.112	ENSPKIG00000013147	srprb	95	72.112	Paramormyrops_kingsleyae
ENSFHEG00000006004	srprb	100	80.451	ENSPMGG00000014061	srprb	97	80.451	Periophthalmus_magnuspinnatus
ENSFHEG00000006004	srprb	99	92.045	ENSPFOG00000011347	srprb	96	92.045	Poecilia_formosa
ENSFHEG00000006004	srprb	97	93.411	ENSPLAG00000001156	srprb	100	93.411	Poecilia_latipinna
ENSFHEG00000006004	srprb	97	92.248	ENSPMEG00000012169	srprb	100	92.248	Poecilia_mexicana
ENSFHEG00000006004	srprb	97	91.473	ENSPREG00000001449	srprb	100	91.473	Poecilia_reticulata
ENSFHEG00000006004	srprb	100	87.640	ENSPNYG00000005911	srprb	97	87.640	Pundamilia_nyererei
ENSFHEG00000006004	srprb	100	70.301	ENSPNAG00000009983	srprb	100	70.301	Pygocentrus_nattereri
ENSFHEG00000006004	srprb	97	73.180	ENSSFOG00015019355	srprb	97	73.180	Scleropages_formosus
ENSFHEG00000006004	srprb	100	86.090	ENSSMAG00000013202	srprb	97	86.090	Scophthalmus_maximus
ENSFHEG00000006004	srprb	100	88.346	ENSSDUG00000018746	srprb	91	88.346	Seriola_dumerili
ENSFHEG00000006004	srprb	100	88.722	ENSSLDG00000020560	srprb	97	88.722	Seriola_lalandi_dorsalis
ENSFHEG00000006004	srprb	100	88.060	ENSSPAG00000008898	srprb	97	88.060	Stegastes_partitus
ENSFHEG00000006004	srprb	100	84.211	ENSTRUG00000022463	srprb	97	84.211	Takifugu_rubripes
ENSFHEG00000006004	srprb	98	82.824	ENSTNIG00000007725	srprb	100	82.824	Tetraodon_nigroviridis
ENSFHEG00000006004	srprb	97	93.798	ENSXCOG00000012585	srprb	100	93.798	Xiphophorus_couchianus
ENSFHEG00000006004	srprb	97	93.411	ENSXMAG00000028725	srprb	100	93.411	Xiphophorus_maculatus