EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000006006 (Gene tree)
Gene ID: 105927204
Gene Symbol: thumpd3
Alias: cb255|sb:cb255|zgc:163086
Full Name: THUMP domain containing 3
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 23030 bases
Position: chrKN811305.1:1631662-1654691
Accession: 105927204
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000005069	THUMP	PF02926.17	7.7e-11	1	1
ENSFHEP00000005080	THUMP	PF02926.17	7.7e-11	1	1
ENSFHEP00000005069	UPF0020	PF01170.18	4.9e-40	1	1
ENSFHEP00000005080	UPF0020	PF01170.18	4.9e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000007781	-	5357	XM_021317143	ENSFHEP00000005069	498 (aa)	XP_021172818	UPI00064511C7
ENSFHET00000007770	-	5651	XM_021317144	ENSFHEP00000005080	498 (aa)	XP_021172819	UPI00064511C7

Gene Model

Click here to download ENSFHEG00000006006's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000006006's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000006006	thumpd3	91	58.333	ENSG00000134077	THUMPD3	92	58.547	Homo_sapiens
ENSFHEG00000006006	thumpd3	98	83.811	ENSAPOG00000015836	thumpd3	99	83.811	Acanthochromis_polyacanthus
ENSFHEG00000006006	thumpd3	88	60.573	ENSAMEG00000011321	THUMPD3	90	60.352	Ailuropoda_melanoleuca
ENSFHEG00000006006	thumpd3	99	83.367	ENSACIG00000020096	thumpd3	99	83.968	Amphilophus_citrinellus
ENSFHEG00000006006	thumpd3	99	82.294	ENSAOCG00000004399	thumpd3	99	82.495	Amphiprion_ocellaris
ENSFHEG00000006006	thumpd3	99	82.696	ENSAPEG00000016740	thumpd3	99	82.897	Amphiprion_percula
ENSFHEG00000006006	thumpd3	99	79.477	ENSATEG00000005345	thumpd3	99	79.074	Anabas_testudineus
ENSFHEG00000006006	thumpd3	76	63.092	ENSAPLG00000003598	THUMPD3	99	62.250	Anas_platyrhynchos
ENSFHEG00000006006	thumpd3	88	59.958	ENSACAG00000014974	THUMPD3	91	61.229	Anolis_carolinensis
ENSFHEG00000006006	thumpd3	91	56.632	ENSANAG00000002365	THUMPD3	93	58.120	Aotus_nancymaae
ENSFHEG00000006006	thumpd3	99	82.365	ENSACLG00000023333	thumpd3	99	82.365	Astatotilapia_calliptera
ENSFHEG00000006006	thumpd3	83	58.313	ENSACLG00000013504	-	87	58.313	Astatotilapia_calliptera
ENSFHEG00000006006	thumpd3	93	70.913	ENSAMXG00000015683	thumpd3	98	70.701	Astyanax_mexicanus
ENSFHEG00000006006	thumpd3	90	61.255	ENSBTAG00000003112	THUMPD3	91	61.087	Bos_taurus
ENSFHEG00000006006	thumpd3	85	35.514	WBGene00010846	M04B2.2	96	35.748	Caenorhabditis_elegans
ENSFHEG00000006006	thumpd3	91	56.000	ENSCJAG00000015949	THUMPD3	92	56.632	Callithrix_jacchus
ENSFHEG00000006006	thumpd3	88	60.087	ENSCAFG00000005499	THUMPD3	93	59.315	Canis_familiaris
ENSFHEG00000006006	thumpd3	74	57.692	ENSCAFG00000008060	-	93	58.486	Canis_familiaris
ENSFHEG00000006006	thumpd3	88	60.087	ENSCAFG00020008895	-	93	59.315	Canis_lupus_dingo
ENSFHEG00000006006	thumpd3	79	59.804	ENSCAFG00020025887	-	94	59.559	Canis_lupus_dingo
ENSFHEG00000006006	thumpd3	88	60.652	ENSCHIG00000024037	THUMPD3	90	60.521	Capra_hircus
ENSFHEG00000006006	thumpd3	91	57.384	ENSTSYG00000000159	THUMPD3	93	57.265	Carlito_syrichta
ENSFHEG00000006006	thumpd3	85	41.549	ENSCAPG00000017486	THUMPD3	84	41.784	Cavia_aperea
ENSFHEG00000006006	thumpd3	91	59.072	ENSCPOG00000033287	THUMPD3	92	58.849	Cavia_porcellus
ENSFHEG00000006006	thumpd3	91	50.746	ENSCCAG00000021429	-	94	52.318	Cebus_capucinus
ENSFHEG00000006006	thumpd3	91	56.632	ENSCCAG00000027067	-	93	58.120	Cebus_capucinus
ENSFHEG00000006006	thumpd3	95	55.647	ENSCATG00000040999	THUMPD3	96	56.701	Cercocebus_atys
ENSFHEG00000006006	thumpd3	89	58.874	ENSCLAG00000000690	THUMPD3	91	59.091	Chinchilla_lanigera
ENSFHEG00000006006	thumpd3	94	56.017	ENSCSAG00000010753	THUMPD3	95	57.083	Chlorocebus_sabaeus
ENSFHEG00000006006	thumpd3	75	48.696	ENSCHOG00000012851	THUMPD3	74	48.696	Choloepus_hoffmanni
ENSFHEG00000006006	thumpd3	91	61.378	ENSCPBG00000014771	THUMPD3	94	61.378	Chrysemys_picta_bellii
ENSFHEG00000006006	thumpd3	88	40.136	ENSCSAVG00000008668	-	97	40.136	Ciona_savignyi
ENSFHEG00000006006	thumpd3	95	55.647	ENSCANG00000031901	THUMPD3	96	56.701	Colobus_angolensis_palliatus
ENSFHEG00000006006	thumpd3	88	60.526	ENSCGRG00001024117	Thumpd3	90	60.927	Cricetulus_griseus_chok1gshd
ENSFHEG00000006006	thumpd3	88	60.526	ENSCGRG00000018116	Thumpd3	90	60.927	Cricetulus_griseus_crigri
ENSFHEG00000006006	thumpd3	94	79.443	ENSCSEG00000002546	thumpd3	99	77.618	Cynoglossus_semilaevis
ENSFHEG00000006006	thumpd3	99	85.081	ENSCVAG00000001019	thumpd3	98	85.081	Cyprinodon_variegatus
ENSFHEG00000006006	thumpd3	93	66.667	ENSDARG00000059634	thumpd3	98	66.596	Danio_rerio
ENSFHEG00000006006	thumpd3	93	58.750	ENSDNOG00000047668	THUMPD3	92	58.750	Dasypus_novemcinctus
ENSFHEG00000006006	thumpd3	88	59.161	ENSDORG00000003257	Thumpd3	90	60.307	Dipodomys_ordii
ENSFHEG00000006006	thumpd3	58	53.698	ENSETEG00000020239	-	60	56.766	Echinops_telfairi
ENSFHEG00000006006	thumpd3	87	50.998	ENSEBUG00000004221	thumpd3	97	50.998	Eptatretus_burgeri
ENSFHEG00000006006	thumpd3	89	59.300	ENSEASG00005013327	THUMPD3	90	59.735	Equus_asinus_asinus
ENSFHEG00000006006	thumpd3	88	61.013	ENSECAG00000002016	THUMPD3	90	61.947	Equus_caballus
ENSFHEG00000006006	thumpd3	91	53.571	ENSEEUG00000014696	THUMPD3	93	54.468	Erinaceus_europaeus
ENSFHEG00000006006	thumpd3	90	85.714	ENSELUG00000018246	thumpd3	77	88.087	Esox_lucius
ENSFHEG00000006006	thumpd3	88	60.706	ENSFCAG00000006171	THUMPD3	90	60.486	Felis_catus
ENSFHEG00000006006	thumpd3	83	57.370	ENSFALG00000013631	THUMPD3	91	58.087	Ficedula_albicollis
ENSFHEG00000006006	thumpd3	88	60.088	ENSFDAG00000014825	THUMPD3	90	60.220	Fukomys_damarensis
ENSFHEG00000006006	thumpd3	94	71.581	ENSGMOG00000007923	thumpd3	95	71.064	Gadus_morhua
ENSFHEG00000006006	thumpd3	87	58.798	ENSGALG00000044813	THUMPD3	94	59.355	Gallus_gallus
ENSFHEG00000006006	thumpd3	99	89.400	ENSGAFG00000021645	thumpd3	99	89.000	Gambusia_affinis
ENSFHEG00000006006	thumpd3	99	77.935	ENSGACG00000000930	thumpd3	99	80.810	Gasterosteus_aculeatus
ENSFHEG00000006006	thumpd3	91	61.715	ENSGAGG00000022750	THUMPD3	94	61.587	Gopherus_agassizii
ENSFHEG00000006006	thumpd3	91	58.547	ENSGGOG00000000604	THUMPD3	92	58.761	Gorilla_gorilla
ENSFHEG00000006006	thumpd3	99	82.365	ENSHBUG00000013405	thumpd3	99	82.365	Haplochromis_burtoni
ENSFHEG00000006006	thumpd3	89	58.369	ENSHGLG00000016200	THUMPD3	91	58.785	Heterocephalus_glaber_female
ENSFHEG00000006006	thumpd3	89	58.458	ENSHGLG00100017321	-	91	58.442	Heterocephalus_glaber_male
ENSFHEG00000006006	thumpd3	87	51.225	ENSHGLG00100000505	-	92	51.910	Heterocephalus_glaber_male
ENSFHEG00000006006	thumpd3	93	78.419	ENSHCOG00000004871	thumpd3	97	78.112	Hippocampus_comes
ENSFHEG00000006006	thumpd3	92	70.779	ENSIPUG00000019415	THUMPD3	94	70.779	Ictalurus_punctatus
ENSFHEG00000006006	thumpd3	88	60.486	ENSSTOG00000003973	THUMPD3	90	60.044	Ictidomys_tridecemlineatus
ENSFHEG00000006006	thumpd3	89	54.447	ENSJJAG00000017751	Thumpd3	88	55.408	Jaculus_jaculus
ENSFHEG00000006006	thumpd3	99	80.080	ENSKMAG00000021025	thumpd3	94	79.678	Kryptolebias_marmoratus
ENSFHEG00000006006	thumpd3	99	80.561	ENSLBEG00000012252	thumpd3	99	80.561	Labrus_bergylta
ENSFHEG00000006006	thumpd3	88	60.345	ENSLACG00000018604	THUMPD3	90	60.475	Latimeria_chalumnae
ENSFHEG00000006006	thumpd3	96	61.657	ENSLOCG00000009800	thumpd3	98	63.843	Lepisosteus_oculatus
ENSFHEG00000006006	thumpd3	89	58.963	ENSLAFG00000005103	THUMPD3	91	59.827	Loxodonta_africana
ENSFHEG00000006006	thumpd3	97	55.000	ENSMFAG00000044884	THUMPD3	97	56.024	Macaca_fascicularis
ENSFHEG00000006006	thumpd3	97	55.000	ENSMMUG00000017307	THUMPD3	97	56.024	Macaca_mulatta
ENSFHEG00000006006	thumpd3	97	55.000	ENSMNEG00000030529	THUMPD3	97	56.024	Macaca_nemestrina
ENSFHEG00000006006	thumpd3	95	56.907	ENSMLEG00000032943	THUMPD3	96	56.907	Mandrillus_leucophaeus
ENSFHEG00000006006	thumpd3	95	81.529	ENSMAMG00000023934	thumpd3	99	79.074	Mastacembelus_armatus
ENSFHEG00000006006	thumpd3	99	82.365	ENSMZEG00005010623	thumpd3	99	82.365	Maylandia_zebra
ENSFHEG00000006006	thumpd3	78	61.654	ENSMGAG00000010182	THUMPD3	100	61.153	Meleagris_gallopavo
ENSFHEG00000006006	thumpd3	88	61.184	ENSMAUG00000012250	Thumpd3	90	61.013	Mesocricetus_auratus
ENSFHEG00000006006	thumpd3	94	54.819	ENSMICG00000010095	THUMPD3	94	54.618	Microcebus_murinus
ENSFHEG00000006006	thumpd3	88	61.369	ENSMOCG00000020148	Thumpd3	90	59.737	Microtus_ochrogaster
ENSFHEG00000006006	thumpd3	98	78.689	ENSMMOG00000021791	thumpd3	99	79.281	Mola_mola
ENSFHEG00000006006	thumpd3	92	57.819	ENSMODG00000004715	-	93	58.299	Monodelphis_domestica
ENSFHEG00000006006	thumpd3	95	80.550	ENSMALG00000017316	thumpd3	99	80.550	Monopterus_albus
ENSFHEG00000006006	thumpd3	57	53.691	MGP_CAROLIEiJ_G0028714	-	61	52.333	Mus_caroli
ENSFHEG00000006006	thumpd3	91	60.000	ENSMUSG00000030264	Thumpd3	92	59.488	Mus_musculus
ENSFHEG00000006006	thumpd3	91	60.000	MGP_PahariEiJ_G0022465	Thumpd3	92	59.488	Mus_pahari
ENSFHEG00000006006	thumpd3	91	60.000	MGP_SPRETEiJ_G0029742	Thumpd3	92	59.488	Mus_spretus
ENSFHEG00000006006	thumpd3	89	60.613	ENSMPUG00000017066	-	91	60.613	Mustela_putorius_furo
ENSFHEG00000006006	thumpd3	88	55.902	ENSMPUG00000005219	-	90	55.902	Mustela_putorius_furo
ENSFHEG00000006006	thumpd3	91	58.209	ENSMLUG00000008538	THUMPD3	92	58.209	Myotis_lucifugus
ENSFHEG00000006006	thumpd3	89	60.131	ENSNGAG00000021014	-	90	60.352	Nannospalax_galili
ENSFHEG00000006006	thumpd3	93	47.983	ENSNGAG00000001549	-	93	48.401	Nannospalax_galili
ENSFHEG00000006006	thumpd3	99	82.365	ENSNBRG00000004886	thumpd3	99	82.365	Neolamprologus_brichardi
ENSFHEG00000006006	thumpd3	91	58.333	ENSNLEG00000003863	THUMPD3	93	58.333	Nomascus_leucogenys
ENSFHEG00000006006	thumpd3	82	57.311	ENSMEUG00000009819	THUMPD3	99	57.176	Notamacropus_eugenii
ENSFHEG00000006006	thumpd3	80	59.367	ENSOPRG00000002020	THUMPD3	98	59.091	Ochotona_princeps
ENSFHEG00000006006	thumpd3	68	55.028	ENSODEG00000018242	THUMPD3	100	56.145	Octodon_degus
ENSFHEG00000006006	thumpd3	99	82.766	ENSONIG00000018977	thumpd3	99	83.166	Oreochromis_niloticus
ENSFHEG00000006006	thumpd3	80	56.867	ENSOANG00000014481	THUMPD3	97	57.831	Ornithorhynchus_anatinus
ENSFHEG00000006006	thumpd3	94	58.282	ENSOCUG00000010921	THUMPD3	97	57.974	Oryctolagus_cuniculus
ENSFHEG00000006006	thumpd3	99	78.745	ENSORLG00000000676	thumpd3	99	78.138	Oryzias_latipes
ENSFHEG00000006006	thumpd3	99	78.947	ENSORLG00020007509	thumpd3	99	78.340	Oryzias_latipes_hni
ENSFHEG00000006006	thumpd3	99	79.150	ENSORLG00015003615	thumpd3	99	78.543	Oryzias_latipes_hsok
ENSFHEG00000006006	thumpd3	99	76.768	ENSOMEG00000014115	thumpd3	99	77.374	Oryzias_melastigma
ENSFHEG00000006006	thumpd3	79	57.635	ENSOGAG00000017111	THUMPD3	99	57.635	Otolemur_garnettii
ENSFHEG00000006006	thumpd3	89	60.215	ENSOARG00000007139	THUMPD3	89	60.086	Ovis_aries
ENSFHEG00000006006	thumpd3	91	58.333	ENSPPAG00000025852	THUMPD3	92	58.333	Pan_paniscus
ENSFHEG00000006006	thumpd3	88	61.589	ENSPPRG00000008071	THUMPD3	90	61.589	Panthera_pardus
ENSFHEG00000006006	thumpd3	88	61.404	ENSPTIG00000017923	THUMPD3	90	61.404	Panthera_tigris_altaica
ENSFHEG00000006006	thumpd3	91	58.120	ENSPTRG00000014585	THUMPD3	92	58.120	Pan_troglodytes
ENSFHEG00000006006	thumpd3	95	55.236	ENSPANG00000016253	THUMPD3	95	56.289	Papio_anubis
ENSFHEG00000006006	thumpd3	91	69.631	ENSPKIG00000014009	thumpd3	94	69.631	Paramormyrops_kingsleyae
ENSFHEG00000006006	thumpd3	88	60.560	ENSPSIG00000007370	THUMPD3	91	60.000	Pelodiscus_sinensis
ENSFHEG00000006006	thumpd3	92	77.826	ENSPMGG00000017563	thumpd3	95	77.874	Periophthalmus_magnuspinnatus
ENSFHEG00000006006	thumpd3	88	61.589	ENSPEMG00000022411	Thumpd3	90	62.031	Peromyscus_maniculatus_bairdii
ENSFHEG00000006006	thumpd3	88	51.828	ENSPMAG00000001291	thumpd3	98	53.318	Petromyzon_marinus
ENSFHEG00000006006	thumpd3	89	58.747	ENSPCIG00000002049	THUMPD3	93	58.650	Phascolarctos_cinereus
ENSFHEG00000006006	thumpd3	99	87.000	ENSPFOG00000002318	thumpd3	99	87.000	Poecilia_formosa
ENSFHEG00000006006	thumpd3	99	87.000	ENSPLAG00000014804	thumpd3	99	87.000	Poecilia_latipinna
ENSFHEG00000006006	thumpd3	99	87.000	ENSPMEG00000000582	thumpd3	99	87.000	Poecilia_mexicana
ENSFHEG00000006006	thumpd3	99	87.400	ENSPREG00000009176	thumpd3	99	87.400	Poecilia_reticulata
ENSFHEG00000006006	thumpd3	90	42.950	ENSPPYG00000017616	-	92	43.142	Pongo_abelii
ENSFHEG00000006006	thumpd3	91	58.120	ENSPPYG00000029461	THUMPD3	93	58.120	Pongo_abelii
ENSFHEG00000006006	thumpd3	81	59.233	ENSPCAG00000015398	THUMPD3	99	59.233	Procavia_capensis
ENSFHEG00000006006	thumpd3	80	52.745	ENSPCOG00000023618	-	94	53.155	Propithecus_coquereli
ENSFHEG00000006006	thumpd3	90	50.323	ENSPCOG00000018095	-	92	52.052	Propithecus_coquereli
ENSFHEG00000006006	thumpd3	89	59.695	ENSPVAG00000008721	THUMPD3	91	59.695	Pteropus_vampyrus
ENSFHEG00000006006	thumpd3	99	82.365	ENSPNYG00000006918	thumpd3	99	82.365	Pundamilia_nyererei
ENSFHEG00000006006	thumpd3	93	70.108	ENSPNAG00000014936	thumpd3	96	70.108	Pygocentrus_nattereri
ENSFHEG00000006006	thumpd3	88	62.335	ENSRNOG00000006941	Thumpd3	90	61.894	Rattus_norvegicus
ENSFHEG00000006006	thumpd3	95	55.738	ENSRBIG00000035954	THUMPD3	96	56.790	Rhinopithecus_bieti
ENSFHEG00000006006	thumpd3	95	55.533	ENSRROG00000035734	THUMPD3	96	56.584	Rhinopithecus_roxellana
ENSFHEG00000006006	thumpd3	91	56.540	ENSSBOG00000023567	THUMPD3	94	58.681	Saimiri_boliviensis_boliviensis
ENSFHEG00000006006	thumpd3	91	58.051	ENSSHAG00000014467	THUMPD3	96	57.787	Sarcophilus_harrisii
ENSFHEG00000006006	thumpd3	91	73.319	ENSSFOG00015019210	thumpd3	92	72.052	Scleropages_formosus
ENSFHEG00000006006	thumpd3	99	80.160	ENSSMAG00000000609	thumpd3	97	82.906	Scophthalmus_maximus
ENSFHEG00000006006	thumpd3	99	82.495	ENSSDUG00000012179	thumpd3	99	84.100	Seriola_dumerili
ENSFHEG00000006006	thumpd3	99	82.897	ENSSLDG00000022028	thumpd3	99	82.897	Seriola_lalandi_dorsalis
ENSFHEG00000006006	thumpd3	77	67.532	ENSSARG00000002239	THUMPD3	79	67.532	Sorex_araneus
ENSFHEG00000006006	thumpd3	90	60.208	ENSSPUG00000017461	THUMPD3	94	60.960	Sphenodon_punctatus
ENSFHEG00000006006	thumpd3	99	82.932	ENSSPAG00000008345	thumpd3	98	82.696	Stegastes_partitus
ENSFHEG00000006006	thumpd3	88	60.652	ENSSSCG00000011542	THUMPD3	90	61.674	Sus_scrofa
ENSFHEG00000006006	thumpd3	87	60.310	ENSTGUG00000010440	THUMPD3	100	61.111	Taeniopygia_guttata
ENSFHEG00000006006	thumpd3	95	70.316	ENSTRUG00000004420	thumpd3	97	70.362	Takifugu_rubripes
ENSFHEG00000006006	thumpd3	94	79.828	ENSTNIG00000014627	thumpd3	99	79.828	Tetraodon_nigroviridis
ENSFHEG00000006006	thumpd3	93	55.439	ENSTBEG00000003450	THUMPD3	93	55.439	Tupaia_belangeri
ENSFHEG00000006006	thumpd3	89	59.355	ENSTTRG00000009694	THUMPD3	91	60.349	Tursiops_truncatus
ENSFHEG00000006006	thumpd3	88	60.793	ENSUAMG00000009412	THUMPD3	90	60.132	Ursus_americanus
ENSFHEG00000006006	thumpd3	89	61.298	ENSUMAG00000019241	THUMPD3	91	61.298	Ursus_maritimus
ENSFHEG00000006006	thumpd3	74	56.186	ENSVPAG00000002855	THUMPD3	91	57.743	Vicugna_pacos
ENSFHEG00000006006	thumpd3	88	60.304	ENSVVUG00000025278	THUMPD3	93	59.529	Vulpes_vulpes
ENSFHEG00000006006	thumpd3	90	59.871	ENSXETG00000001447	thumpd3	91	59.013	Xenopus_tropicalis
ENSFHEG00000006006	thumpd3	98	88.957	ENSXCOG00000000159	thumpd3	99	89.218	Xiphophorus_couchianus
ENSFHEG00000006006	thumpd3	99	88.000	ENSXMAG00000001423	thumpd3	99	87.600	Xiphophorus_maculatus