EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000006068 (Gene tree)
Gene ID: 105939693
Gene Symbol: chd9
Alias: fb08b06|fb34c12|wu:fb08b06|wu:fb34c12
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 144756 bases
Position: chrKN811582.1:762299-907054
Accession: 105939693
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000024285	ResIII	PF04851.15	3.6e-06	1	1
ENSFHEP00000024317	ResIII	PF04851.15	3.8e-06	1	1
ENSFHEP00000004896	ResIII	PF04851.15	2.1e-05	1	1
ENSFHEP00000004912	ResIII	PF04851.15	2.1e-05	1	1
ENSFHEP00000024285	BRK	PF07533.16	4.1e-33	1	2
ENSFHEP00000024285	BRK	PF07533.16	4.1e-33	2	2
ENSFHEP00000024317	BRK	PF07533.16	4.6e-33	1	2
ENSFHEP00000024317	BRK	PF07533.16	4.6e-33	2	2
ENSFHEP00000004896	BRK	PF07533.16	7.2e-33	1	2
ENSFHEP00000004896	BRK	PF07533.16	7.2e-33	2	2
ENSFHEP00000004912	BRK	PF07533.16	7.2e-33	1	2
ENSFHEP00000004912	BRK	PF07533.16	7.2e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000008185	-	7335	-	ENSFHEP00000024285	2444 (aa)	-	-
ENSFHET00000008078	-	12161	XM_012881961	ENSFHEP00000004896	2993 (aa)	XP_012737415	UPI000644B52B
ENSFHET00000008047	-	12161	-	ENSFHEP00000004912	2993 (aa)	-	UPI000644B52B
ENSFHET00000008103	-	10244	-	ENSFHEP00000024317	2489 (aa)	-	-

Gene Model

Click here to download ENSFHEG00000006068's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000006068's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000006068	chd9	69	68.810	ENSFHEG00000001311	chd7	63	64.378

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000006068	chd9	96	70.335	ENSG00000177200	CHD9	95	70.883	Homo_sapiens
ENSFHEG00000006068	chd9	99	89.476	ENSAPOG00000023034	chd9	99	88.782	Acanthochromis_polyacanthus
ENSFHEG00000006068	chd9	98	68.176	ENSAMEG00000016232	CHD9	84	70.481	Ailuropoda_melanoleuca
ENSFHEG00000006068	chd9	98	83.065	ENSACIG00000004097	chd9	97	80.847	Amphilophus_citrinellus
ENSFHEG00000006068	chd9	99	89.023	ENSAOCG00000005487	chd9	99	89.224	Amphiprion_ocellaris
ENSFHEG00000006068	chd9	99	88.943	ENSAPEG00000009859	chd9	99	89.184	Amphiprion_percula
ENSFHEG00000006068	chd9	99	88.548	ENSATEG00000002748	chd9	97	84.185	Anabas_testudineus
ENSFHEG00000006068	chd9	99	69.412	ENSAPLG00000002826	CHD9	79	71.721	Anas_platyrhynchos
ENSFHEG00000006068	chd9	66	77.200	ENSACAG00000016150	CHD9	78	70.748	Anolis_carolinensis
ENSFHEG00000006068	chd9	97	60.864	ENSANAG00000015630	CHD9	91	68.440	Aotus_nancymaae
ENSFHEG00000006068	chd9	98	85.378	ENSACLG00000016899	chd9	99	82.295	Astatotilapia_calliptera
ENSFHEG00000006068	chd9	99	76.855	ENSAMXG00000005652	chd9	97	78.652	Astyanax_mexicanus
ENSFHEG00000006068	chd9	95	69.288	ENSBTAG00000002287	CHD9	84	70.538	Bos_taurus
ENSFHEG00000006068	chd9	95	69.558	ENSCJAG00000001573	CHD9	91	68.794	Callithrix_jacchus
ENSFHEG00000006068	chd9	68	75.075	ENSCAFG00000009699	CHD9	84	70.722	Canis_familiaris
ENSFHEG00000006068	chd9	68	75.075	ENSCAFG00020002879	CHD9	91	68.905	Canis_lupus_dingo
ENSFHEG00000006068	chd9	96	68.079	ENSCHIG00000021000	CHD9	56	74.635	Capra_hircus
ENSFHEG00000006068	chd9	68	74.417	ENSTSYG00000007693	CHD9	91	68.551	Carlito_syrichta
ENSFHEG00000006068	chd9	76	60.054	ENSCAPG00000011604	CHD9	60	62.748	Cavia_aperea
ENSFHEG00000006068	chd9	68	70.233	ENSCPOG00000036544	CHD9	84	66.526	Cavia_porcellus
ENSFHEG00000006068	chd9	68	74.701	ENSCCAG00000036178	CHD9	91	69.149	Cebus_capucinus
ENSFHEG00000006068	chd9	68	74.836	ENSCATG00000036753	CHD9	91	68.293	Cercocebus_atys
ENSFHEG00000006068	chd9	96	60.874	ENSCLAG00000007137	CHD9	99	76.897	Chinchilla_lanigera
ENSFHEG00000006068	chd9	68	74.776	ENSCSAG00000005311	CHD9	84	70.084	Chlorocebus_sabaeus
ENSFHEG00000006068	chd9	60	91.146	ENSCHOG00000003935	CHD9	55	91.099	Choloepus_hoffmanni
ENSFHEG00000006068	chd9	90	82.191	ENSCPBG00000012459	CHD9	84	78.566	Chrysemys_picta_bellii
ENSFHEG00000006068	chd9	68	74.776	ENSCANG00000030349	CHD9	91	68.905	Colobus_angolensis_palliatus
ENSFHEG00000006068	chd9	94	70.885	ENSCGRG00001016150	Chd9	84	69.852	Cricetulus_griseus_chok1gshd
ENSFHEG00000006068	chd9	94	70.885	ENSCGRG00000012850	Chd9	99	77.567	Cricetulus_griseus_crigri
ENSFHEG00000006068	chd9	99	84.698	ENSCSEG00000009209	chd9	99	82.806	Cynoglossus_semilaevis
ENSFHEG00000006068	chd9	98	91.680	ENSCVAG00000016195	chd9	99	87.697	Cyprinodon_variegatus
ENSFHEG00000006068	chd9	98	76.294	ENSDARG00000074498	chd9	97	76.970	Danio_rerio
ENSFHEG00000006068	chd9	92	70.246	ENSDNOG00000006045	CHD9	97	70.815	Dasypus_novemcinctus
ENSFHEG00000006068	chd9	78	69.755	ENSDORG00000008523	-	96	70.538	Dipodomys_ordii
ENSFHEG00000006068	chd9	78	92.063	ENSETEG00000009565	CHD9	76	91.935	Echinops_telfairi
ENSFHEG00000006068	chd9	87	77.646	ENSEASG00005014832	CHD9	95	79.127	Equus_asinus_asinus
ENSFHEG00000006068	chd9	97	60.187	ENSECAG00000011505	CHD9	84	70.290	Equus_caballus
ENSFHEG00000006068	chd9	80	86.522	ENSEEUG00000014515	CHD9	73	84.530	Erinaceus_europaeus
ENSFHEG00000006068	chd9	89	79.226	ENSELUG00000006031	chd9	97	79.619	Esox_lucius
ENSFHEG00000006068	chd9	68	74.895	ENSFCAG00000022534	CHD9	91	69.258	Felis_catus
ENSFHEG00000006068	chd9	99	69.187	ENSFALG00000013276	CHD9	95	71.781	Ficedula_albicollis
ENSFHEG00000006068	chd9	99	59.269	ENSFDAG00000021037	CHD9	85	69.547	Fukomys_damarensis
ENSFHEG00000006068	chd9	81	86.847	ENSGMOG00000006040	chd9	82	87.342	Gadus_morhua
ENSFHEG00000006068	chd9	94	71.624	ENSGALG00000039178	CHD9	80	72.104	Gallus_gallus
ENSFHEG00000006068	chd9	99	93.968	ENSGAFG00000010014	chd9	99	94.777	Gambusia_affinis
ENSFHEG00000006068	chd9	97	83.727	ENSGACG00000016694	chd9	97	89.731	Gasterosteus_aculeatus
ENSFHEG00000006068	chd9	68	74.716	ENSGGOG00000014816	CHD9	91	68.551	Gorilla_gorilla
ENSFHEG00000006068	chd9	98	86.711	ENSHBUG00000023322	chd9	99	85.835	Haplochromis_burtoni
ENSFHEG00000006068	chd9	87	67.209	ENSHGLG00000014938	CHD9	96	80.262	Heterocephalus_glaber_female
ENSFHEG00000006068	chd9	95	84.427	ENSHCOG00000000937	chd9	97	83.306	Hippocampus_comes
ENSFHEG00000006068	chd9	98	77.691	ENSIPUG00000016448	chd9	96	77.975	Ictalurus_punctatus
ENSFHEG00000006068	chd9	97	68.513	ENSSTOG00000022273	CHD9	99	77.121	Ictidomys_tridecemlineatus
ENSFHEG00000006068	chd9	51	77.305	ENSJJAG00000015741	-	96	70.948	Jaculus_jaculus
ENSFHEG00000006068	chd9	96	89.722	ENSKMAG00000016784	chd9	96	90.518	Kryptolebias_marmoratus
ENSFHEG00000006068	chd9	96	87.495	ENSLBEG00000012077	chd9	96	88.021	Labrus_bergylta
ENSFHEG00000006068	chd9	95	66.944	ENSLACG00000005557	CHD9	79	67.146	Latimeria_chalumnae
ENSFHEG00000006068	chd9	98	76.027	ENSLOCG00000007225	chd9	98	76.187	Lepisosteus_oculatus
ENSFHEG00000006068	chd9	68	74.286	ENSLAFG00000015374	CHD9	84	69.523	Loxodonta_africana
ENSFHEG00000006068	chd9	91	71.722	ENSMFAG00000041354	CHD9	95	70.882	Macaca_fascicularis
ENSFHEG00000006068	chd9	68	74.776	ENSMMUG00000016310	CHD9	91	68.905	Macaca_mulatta
ENSFHEG00000006068	chd9	85	70.591	ENSMNEG00000031494	CHD9	86	71.322	Macaca_nemestrina
ENSFHEG00000006068	chd9	68	74.836	ENSMLEG00000043219	CHD9	91	68.905	Mandrillus_leucophaeus
ENSFHEG00000006068	chd9	99	87.747	ENSMAMG00000003909	chd9	99	81.812	Mastacembelus_armatus
ENSFHEG00000006068	chd9	99	87.209	ENSMZEG00005006581	chd9	99	87.650	Maylandia_zebra
ENSFHEG00000006068	chd9	99	64.756	ENSMGAG00000004642	CHD9	59	72.151	Meleagris_gallopavo
ENSFHEG00000006068	chd9	68	74.776	ENSMICG00000016679	CHD9	91	69.258	Microcebus_murinus
ENSFHEG00000006068	chd9	98	83.548	ENSMMOG00000016406	chd9	97	77.668	Mola_mola
ENSFHEG00000006068	chd9	87	75.583	ENSMODG00000013142	-	96	77.509	Monodelphis_domestica
ENSFHEG00000006068	chd9	98	85.961	ENSMALG00000013306	chd9	93	82.497	Monopterus_albus
ENSFHEG00000006068	chd9	94	69.015	MGP_CAROLIEiJ_G0031364	Chd9	84	69.536	Mus_caroli
ENSFHEG00000006068	chd9	95	69.869	ENSMUSG00000056608	Chd9	99	76.589	Mus_musculus
ENSFHEG00000006068	chd9	91	75.031	MGP_PahariEiJ_G0022964	Chd9	84	68.895	Mus_pahari
ENSFHEG00000006068	chd9	94	68.500	MGP_SPRETEiJ_G0032483	Chd9	84	69.497	Mus_spretus
ENSFHEG00000006068	chd9	68	75.015	ENSMPUG00000003285	CHD9	84	70.494	Mustela_putorius_furo
ENSFHEG00000006068	chd9	94	68.981	ENSMLUG00000004456	CHD9	84	69.705	Myotis_lucifugus
ENSFHEG00000006068	chd9	99	87.893	ENSNBRG00000009423	chd9	99	88.176	Neolamprologus_brichardi
ENSFHEG00000006068	chd9	87	71.627	ENSNLEG00000001026	CHD9	86	71.335	Nomascus_leucogenys
ENSFHEG00000006068	chd9	71	93.985	ENSMEUG00000008222	-	74	88.125	Notamacropus_eugenii
ENSFHEG00000006068	chd9	87	66.930	ENSODEG00000004466	CHD9	85	69.803	Octodon_degus
ENSFHEG00000006068	chd9	98	86.530	ENSONIG00000002816	chd9	96	88.922	Oreochromis_niloticus
ENSFHEG00000006068	chd9	66	76.839	ENSOANG00000013401	CHD9	84	71.032	Ornithorhynchus_anatinus
ENSFHEG00000006068	chd9	96	68.587	ENSOCUG00000001016	CHD9	94	71.125	Oryctolagus_cuniculus
ENSFHEG00000006068	chd9	96	88.136	ENSORLG00000013810	chd9	96	85.602	Oryzias_latipes
ENSFHEG00000006068	chd9	96	85.775	ENSORLG00020020665	chd9	96	80.928	Oryzias_latipes_hni
ENSFHEG00000006068	chd9	97	87.536	ENSORLG00015019126	chd9	96	88.468	Oryzias_latipes_hsok
ENSFHEG00000006068	chd9	55	90.344	ENSOMEG00000015978	chd9	98	82.499	Oryzias_melastigma
ENSFHEG00000006068	chd9	98	67.496	ENSOGAG00000002110	CHD9	80	70.786	Otolemur_garnettii
ENSFHEG00000006068	chd9	97	60.957	ENSOARG00000017664	CHD9	84	69.891	Ovis_aries
ENSFHEG00000006068	chd9	96	69.908	ENSPPAG00000039388	-	96	70.488	Pan_paniscus
ENSFHEG00000006068	chd9	68	75.015	ENSPPRG00000004801	CHD9	91	68.905	Panthera_pardus
ENSFHEG00000006068	chd9	68	73.282	ENSPTIG00000021854	CHD9	84	69.016	Panthera_tigris_altaica
ENSFHEG00000006068	chd9	68	74.716	ENSPTRG00000008113	CHD9	91	68.551	Pan_troglodytes
ENSFHEG00000006068	chd9	96	70.431	ENSPANG00000019307	CHD9	95	71.138	Papio_anubis
ENSFHEG00000006068	chd9	94	72.412	ENSPKIG00000025401	-	88	67.079	Paramormyrops_kingsleyae
ENSFHEG00000006068	chd9	95	77.782	ENSPKIG00000021876	chd9	96	78.390	Paramormyrops_kingsleyae
ENSFHEG00000006068	chd9	55	78.826	ENSPSIG00000008099	CHD9	71	78.328	Pelodiscus_sinensis
ENSFHEG00000006068	chd9	85	71.198	ENSPCIG00000017215	CHD9	97	72.329	Phascolarctos_cinereus
ENSFHEG00000006068	chd9	99	93.986	ENSPFOG00000015839	chd9	99	93.241	Poecilia_formosa
ENSFHEG00000006068	chd9	99	94.108	ENSPLAG00000011118	chd9	99	93.443	Poecilia_latipinna
ENSFHEG00000006068	chd9	99	89.826	ENSPMEG00000015106	chd9	99	88.528	Poecilia_mexicana
ENSFHEG00000006068	chd9	99	93.968	ENSPREG00000006473	chd9	99	94.453	Poecilia_reticulata
ENSFHEG00000006068	chd9	68	74.716	ENSPPYG00000007348	CHD9	85	69.790	Pongo_abelii
ENSFHEG00000006068	chd9	72	79.618	ENSPCAG00000007564	CHD9	73	81.485	Procavia_capensis
ENSFHEG00000006068	chd9	68	72.385	ENSPCOG00000028433	CHD9	91	68.198	Propithecus_coquereli
ENSFHEG00000006068	chd9	78	72.283	ENSPVAG00000015617	CHD9	81	73.646	Pteropus_vampyrus
ENSFHEG00000006068	chd9	99	87.806	ENSPNYG00000010947	chd9	99	87.766	Pundamilia_nyererei
ENSFHEG00000006068	chd9	96	78.114	ENSPNAG00000024141	chd9	97	78.204	Pygocentrus_nattereri
ENSFHEG00000006068	chd9	89	59.053	ENSRNOG00000049302	Chd9	76	81.203	Rattus_norvegicus
ENSFHEG00000006068	chd9	96	70.431	ENSRBIG00000035553	CHD9	95	71.138	Rhinopithecus_bieti
ENSFHEG00000006068	chd9	94	71.235	ENSRROG00000033278	CHD9	96	71.150	Rhinopithecus_roxellana
ENSFHEG00000006068	chd9	68	74.641	ENSSBOG00000030240	CHD9	91	68.794	Saimiri_boliviensis_boliviensis
ENSFHEG00000006068	chd9	97	69.136	ENSSHAG00000002719	CHD9	83	67.026	Sarcophilus_harrisii
ENSFHEG00000006068	chd9	95	78.559	ENSSFOG00015020209	chd9	97	78.392	Scleropages_formosus
ENSFHEG00000006068	chd9	97	74.089	ENSSFOG00015001327	chd9	95	75.532	Scleropages_formosus
ENSFHEG00000006068	chd9	96	88.696	ENSSMAG00000008953	chd9	97	89.315	Scophthalmus_maximus
ENSFHEG00000006068	chd9	99	89.055	ENSSDUG00000006139	chd9	99	89.136	Seriola_dumerili
ENSFHEG00000006068	chd9	99	88.287	ENSSLDG00000017818	chd9	99	88.367	Seriola_lalandi_dorsalis
ENSFHEG00000006068	chd9	71	76.833	ENSSARG00000010632	CHD9	55	77.000	Sorex_araneus
ENSFHEG00000006068	chd9	99	88.822	ENSSPAG00000021649	chd9	99	89.023	Stegastes_partitus
ENSFHEG00000006068	chd9	99	67.720	ENSSSCG00000033591	CHD9	56	75.684	Sus_scrofa
ENSFHEG00000006068	chd9	85	73.443	ENSTGUG00000007476	CHD9	87	71.985	Taeniopygia_guttata
ENSFHEG00000006068	chd9	98	85.312	ENSTRUG00000009125	chd9	99	80.454	Takifugu_rubripes
ENSFHEG00000006068	chd9	67	86.603	ENSTNIG00000003825	chd9	84	98.817	Tetraodon_nigroviridis
ENSFHEG00000006068	chd9	61	94.915	ENSTBEG00000016052	-	63	94.915	Tupaia_belangeri
ENSFHEG00000006068	chd9	82	75.885	ENSTTRG00000012674	CHD9	77	70.448	Tursiops_truncatus
ENSFHEG00000006068	chd9	79	74.280	ENSUMAG00000004043	CHD9	95	86.164	Ursus_maritimus
ENSFHEG00000006068	chd9	71	75.661	ENSVPAG00000001374	CHD9	82	69.043	Vicugna_pacos
ENSFHEG00000006068	chd9	68	75.015	ENSVVUG00000019435	CHD9	84	70.680	Vulpes_vulpes
ENSFHEG00000006068	chd9	95	68.580	ENSXETG00000000349	chd9	77	75.643	Xenopus_tropicalis
ENSFHEG00000006068	chd9	99	91.764	ENSXCOG00000012997	chd9	99	92.531	Xiphophorus_couchianus
ENSFHEG00000006068	chd9	99	93.486	ENSXMAG00000016192	chd9	99	94.411	Xiphophorus_maculatus