EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000006091 (Gene tree)
Gene ID: 105939146
Gene Symbol: gfm1
Alias: fc96f12|wu:fc96f12|zgc:154041
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 24124 bases
Position: chrKN811559.1:756590-780713
Accession: 105939146
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000005109	GTP_EFTU	PF00009.27	2.4e-62	1	1
ENSFHEP00000005109	GTP_EFTU_D2	PF03144.25	3.2e-16	1	1
ENSFHEP00000005109	EFG_IV	PF03764.18	2e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000007714	-	4585	XM_012881207	ENSFHEP00000005109	748 (aa)	XP_012736661	UPI000644E393

Gene Model

Click here to download ENSFHEG00000006091's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000006091's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000006091	gfm1	56	33.690	ENSFHEG00000016859	guf1	67	33.690
ENSFHEG00000006091	gfm1	76	38.926	ENSFHEG00000002184	-	74	38.926
ENSFHEG00000006091	gfm1	96	33.763	ENSFHEG00000006210	gfm2	96	33.508
ENSFHEG00000006091	gfm1	75	38.926	ENSFHEG00000012721	-	73	38.926

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000006091	gfm1	98	80.136	ENSG00000168827	GFM1	100	91.667	Homo_sapiens
ENSFHEG00000006091	gfm1	93	88.252	ENSAPOG00000016489	gfm1	99	88.252	Acanthochromis_polyacanthus
ENSFHEG00000006091	gfm1	96	81.894	ENSAMEG00000013542	GFM1	95	81.894	Ailuropoda_melanoleuca
ENSFHEG00000006091	gfm1	97	86.897	ENSACIG00000014465	gfm1	94	86.897	Amphilophus_citrinellus
ENSFHEG00000006091	gfm1	100	89.439	ENSAOCG00000006023	gfm1	100	89.439	Amphiprion_ocellaris
ENSFHEG00000006091	gfm1	100	89.305	ENSAPEG00000024499	gfm1	100	89.305	Amphiprion_percula
ENSFHEG00000006091	gfm1	100	91.444	ENSATEG00000013789	gfm1	100	91.444	Anabas_testudineus
ENSFHEG00000006091	gfm1	97	80.414	ENSAPLG00000005022	GFM1	100	80.414	Anas_platyrhynchos
ENSFHEG00000006091	gfm1	97	80.552	ENSACAG00000006829	GFM1	98	80.552	Anolis_carolinensis
ENSFHEG00000006091	gfm1	100	79.228	ENSANAG00000035983	GFM1	100	79.228	Aotus_nancymaae
ENSFHEG00000006091	gfm1	100	91.979	ENSACLG00000016586	gfm1	100	91.979	Astatotilapia_calliptera
ENSFHEG00000006091	gfm1	100	85.829	ENSAMXG00000013435	gfm1	98	86.867	Astyanax_mexicanus
ENSFHEG00000006091	gfm1	96	81.616	ENSBTAG00000027795	GFM1	95	81.616	Bos_taurus
ENSFHEG00000006091	gfm1	94	57.204	WBGene00009246	gfm-1	95	56.882	Caenorhabditis_elegans
ENSFHEG00000006091	gfm1	97	81.680	ENSCJAG00000000363	GFM1	97	81.680	Callithrix_jacchus
ENSFHEG00000006091	gfm1	98	80.790	ENSCAFG00000009006	GFM1	100	81.657	Canis_familiaris
ENSFHEG00000006091	gfm1	98	80.680	ENSCAFG00020005878	GFM1	98	82.173	Canis_lupus_dingo
ENSFHEG00000006091	gfm1	96	81.755	ENSCHIG00000015220	GFM1	95	81.755	Capra_hircus
ENSFHEG00000006091	gfm1	100	78.752	ENSTSYG00000002013	GFM1	100	78.752	Carlito_syrichta
ENSFHEG00000006091	gfm1	96	70.994	ENSCAPG00000005699	GFM1	97	70.994	Cavia_aperea
ENSFHEG00000006091	gfm1	100	78.780	ENSCPOG00000001194	GFM1	100	78.780	Cavia_porcellus
ENSFHEG00000006091	gfm1	97	81.129	ENSCCAG00000025561	GFM1	97	81.129	Cebus_capucinus
ENSFHEG00000006091	gfm1	100	78.695	ENSCATG00000037622	GFM1	100	78.695	Cercocebus_atys
ENSFHEG00000006091	gfm1	97	80.441	ENSCLAG00000002503	GFM1	96	80.441	Chinchilla_lanigera
ENSFHEG00000006091	gfm1	100	79.095	ENSCSAG00000012162	GFM1	100	79.095	Chlorocebus_sabaeus
ENSFHEG00000006091	gfm1	100	70.159	ENSCHOG00000004867	GFM1	100	70.159	Choloepus_hoffmanni
ENSFHEG00000006091	gfm1	100	79.439	ENSCPBG00000018367	GFM1	99	79.439	Chrysemys_picta_bellii
ENSFHEG00000006091	gfm1	94	59.021	ENSCING00000011960	-	93	59.021	Ciona_intestinalis
ENSFHEG00000006091	gfm1	94	60.795	ENSCSAVG00000008514	-	99	59.687	Ciona_savignyi
ENSFHEG00000006091	gfm1	98	80.000	ENSCANG00000031714	GFM1	100	78.828	Colobus_angolensis_palliatus
ENSFHEG00000006091	gfm1	100	78.961	ENSCGRG00001022095	GFM1	100	78.961	Cricetulus_griseus_chok1gshd
ENSFHEG00000006091	gfm1	100	78.961	ENSCGRG00000012043	GFM1	100	78.961	Cricetulus_griseus_crigri
ENSFHEG00000006091	gfm1	97	83.126	ENSCSEG00000017088	gfm1	99	83.126	Cynoglossus_semilaevis
ENSFHEG00000006091	gfm1	100	95.321	ENSCVAG00000004126	gfm1	100	95.321	Cyprinodon_variegatus
ENSFHEG00000006091	gfm1	100	84.091	ENSDARG00000063624	gfm1	100	84.091	Danio_rerio
ENSFHEG00000006091	gfm1	55	78.973	ENSDNOG00000016385	-	100	78.973	Dasypus_novemcinctus
ENSFHEG00000006091	gfm1	100	77.822	ENSDORG00000014165	Gfm1	100	77.822	Dipodomys_ordii
ENSFHEG00000006091	gfm1	95	68.688	FBgn0263133	mEFG1	95	68.688	Drosophila_melanogaster
ENSFHEG00000006091	gfm1	96	73.509	ENSETEG00000019197	GFM1	95	73.509	Echinops_telfairi
ENSFHEG00000006091	gfm1	90	63.166	ENSEBUG00000012794	gfm1	100	63.166	Eptatretus_burgeri
ENSFHEG00000006091	gfm1	96	60.278	ENSEEUG00000000429	GFM1	99	60.278	Erinaceus_europaeus
ENSFHEG00000006091	gfm1	100	84.759	ENSELUG00000014728	gfm1	100	84.759	Esox_lucius
ENSFHEG00000006091	gfm1	97	80.854	ENSFCAG00000013291	GFM1	100	79.045	Felis_catus
ENSFHEG00000006091	gfm1	90	79.852	ENSFALG00000007619	GFM1	100	79.852	Ficedula_albicollis
ENSFHEG00000006091	gfm1	100	78.382	ENSFDAG00000016559	GFM1	100	78.382	Fukomys_damarensis
ENSFHEG00000006091	gfm1	97	86.795	ENSGMOG00000010161	gfm1	100	86.795	Gadus_morhua
ENSFHEG00000006091	gfm1	97	80.414	ENSGALG00000009634	GFM1	98	80.414	Gallus_gallus
ENSFHEG00000006091	gfm1	100	94.920	ENSGAFG00000012527	gfm1	100	94.920	Gambusia_affinis
ENSFHEG00000006091	gfm1	100	90.387	ENSGACG00000009864	gfm1	100	90.387	Gasterosteus_aculeatus
ENSFHEG00000006091	gfm1	98	80.136	ENSGGOG00000003085	GFM1	100	78.961	Gorilla_gorilla
ENSFHEG00000006091	gfm1	100	92.112	ENSHBUG00000002120	gfm1	100	92.112	Haplochromis_burtoni
ENSFHEG00000006091	gfm1	97	79.752	ENSHGLG00000016855	GFM1	100	77.719	Heterocephalus_glaber_female
ENSFHEG00000006091	gfm1	97	79.752	ENSHGLG00100013049	GFM1	100	77.719	Heterocephalus_glaber_male
ENSFHEG00000006091	gfm1	100	89.171	ENSHCOG00000007638	gfm1	100	89.171	Hippocampus_comes
ENSFHEG00000006091	gfm1	100	85.695	ENSIPUG00000005873	gfm1	100	85.695	Ictalurus_punctatus
ENSFHEG00000006091	gfm1	97	79.752	ENSSTOG00000010150	GFM1	98	79.752	Ictidomys_tridecemlineatus
ENSFHEG00000006091	gfm1	100	78.029	ENSJJAG00000016447	Gfm1	100	78.029	Jaculus_jaculus
ENSFHEG00000006091	gfm1	100	89.439	ENSKMAG00000020768	gfm1	100	89.439	Kryptolebias_marmoratus
ENSFHEG00000006091	gfm1	94	91.583	ENSLBEG00000021315	gfm1	100	91.583	Labrus_bergylta
ENSFHEG00000006091	gfm1	100	80.615	ENSLACG00000012295	GFM1	100	80.615	Latimeria_chalumnae
ENSFHEG00000006091	gfm1	97	80.711	ENSLOCG00000003778	gfm1	100	80.711	Lepisosteus_oculatus
ENSFHEG00000006091	gfm1	99	77.333	ENSLAFG00000010945	GFM1	99	78.194	Loxodonta_africana
ENSFHEG00000006091	gfm1	100	78.828	ENSMFAG00000035731	GFM1	100	78.828	Macaca_fascicularis
ENSFHEG00000006091	gfm1	100	78.828	ENSMMUG00000004961	GFM1	100	78.828	Macaca_mulatta
ENSFHEG00000006091	gfm1	100	78.828	ENSMNEG00000033245	GFM1	100	78.828	Macaca_nemestrina
ENSFHEG00000006091	gfm1	97	79.034	ENSMLEG00000030908	GFM1	99	78.784	Mandrillus_leucophaeus
ENSFHEG00000006091	gfm1	100	89.706	ENSMAMG00000011760	gfm1	100	89.706	Mastacembelus_armatus
ENSFHEG00000006091	gfm1	100	92.112	ENSMZEG00005016639	gfm1	100	92.112	Maylandia_zebra
ENSFHEG00000006091	gfm1	97	80.387	ENSMGAG00000010641	GFM1	97	80.387	Meleagris_gallopavo
ENSFHEG00000006091	gfm1	97	81.241	ENSMAUG00000000611	Gfm1	97	81.241	Mesocricetus_auratus
ENSFHEG00000006091	gfm1	97	81.405	ENSMICG00000049086	GFM1	96	81.405	Microcebus_murinus
ENSFHEG00000006091	gfm1	100	79.494	ENSMOCG00000000465	Gfm1	100	79.494	Microtus_ochrogaster
ENSFHEG00000006091	gfm1	97	90.771	ENSMMOG00000012538	gfm1	98	90.771	Mola_mola
ENSFHEG00000006091	gfm1	99	79.217	ENSMODG00000015673	GFM1	99	79.217	Monodelphis_domestica
ENSFHEG00000006091	gfm1	96	88.006	ENSMALG00000012508	gfm1	95	88.006	Monopterus_albus
ENSFHEG00000006091	gfm1	100	79.361	MGP_CAROLIEiJ_G0025052	Gfm1	100	79.361	Mus_caroli
ENSFHEG00000006091	gfm1	100	79.095	ENSMUSG00000027774	Gfm1	100	79.095	Mus_musculus
ENSFHEG00000006091	gfm1	100	78.961	MGP_PahariEiJ_G0026495	Gfm1	100	78.961	Mus_pahari
ENSFHEG00000006091	gfm1	100	79.095	MGP_SPRETEiJ_G0025994	Gfm1	100	79.095	Mus_spretus
ENSFHEG00000006091	gfm1	97	81.405	ENSMPUG00000002859	GFM1	96	81.405	Mustela_putorius_furo
ENSFHEG00000006091	gfm1	97	81.129	ENSMLUG00000000452	GFM1	96	81.129	Myotis_lucifugus
ENSFHEG00000006091	gfm1	100	78.533	ENSNGAG00000012375	Gfm1	100	78.533	Nannospalax_galili
ENSFHEG00000006091	gfm1	97	92.170	ENSNBRG00000004631	gfm1	99	92.170	Neolamprologus_brichardi
ENSFHEG00000006091	gfm1	97	80.716	ENSNLEG00000004176	GFM1	100	78.961	Nomascus_leucogenys
ENSFHEG00000006091	gfm1	91	72.794	ENSMEUG00000007784	GFM1	99	72.794	Notamacropus_eugenii
ENSFHEG00000006091	gfm1	100	79.172	ENSOPRG00000009860	GFM1	100	79.172	Ochotona_princeps
ENSFHEG00000006091	gfm1	98	80.518	ENSODEG00000004316	GFM1	100	79.178	Octodon_degus
ENSFHEG00000006091	gfm1	100	92.513	ENSONIG00000003772	gfm1	100	92.513	Oreochromis_niloticus
ENSFHEG00000006091	gfm1	98	81.063	ENSOCUG00000013561	GFM1	99	80.187	Oryctolagus_cuniculus
ENSFHEG00000006091	gfm1	95	90.678	ENSORLG00000006487	gfm1	100	90.678	Oryzias_latipes
ENSFHEG00000006091	gfm1	100	90.107	ENSORLG00020003362	gfm1	100	90.107	Oryzias_latipes_hni
ENSFHEG00000006091	gfm1	100	89.840	ENSORLG00015005829	gfm1	100	89.840	Oryzias_latipes_hsok
ENSFHEG00000006091	gfm1	100	90.374	ENSOMEG00000012894	gfm1	100	90.374	Oryzias_melastigma
ENSFHEG00000006091	gfm1	97	80.854	ENSOGAG00000008298	GFM1	96	80.854	Otolemur_garnettii
ENSFHEG00000006091	gfm1	96	80.860	ENSOARG00000002409	GFM1	99	80.860	Ovis_aries
ENSFHEG00000006091	gfm1	98	80.136	ENSPPAG00000033881	GFM1	100	78.961	Pan_paniscus
ENSFHEG00000006091	gfm1	97	80.854	ENSPPRG00000009281	GFM1	100	79.045	Panthera_pardus
ENSFHEG00000006091	gfm1	97	80.716	ENSPTIG00000012416	GFM1	100	78.912	Panthera_tigris_altaica
ENSFHEG00000006091	gfm1	98	80.136	ENSPTRG00000015570	GFM1	100	78.961	Pan_troglodytes
ENSFHEG00000006091	gfm1	100	78.828	ENSPANG00000016512	GFM1	100	78.828	Papio_anubis
ENSFHEG00000006091	gfm1	100	83.690	ENSPKIG00000004876	gfm1	100	83.690	Paramormyrops_kingsleyae
ENSFHEG00000006091	gfm1	100	79.840	ENSPSIG00000012567	GFM1	99	79.840	Pelodiscus_sinensis
ENSFHEG00000006091	gfm1	97	87.586	ENSPMGG00000014068	gfm1	100	87.586	Periophthalmus_magnuspinnatus
ENSFHEG00000006091	gfm1	100	79.095	ENSPEMG00000008942	Gfm1	100	79.095	Peromyscus_maniculatus_bairdii
ENSFHEG00000006091	gfm1	86	77.760	ENSPCIG00000020195	GFM1	95	80.820	Phascolarctos_cinereus
ENSFHEG00000006091	gfm1	100	95.588	ENSPFOG00000011022	gfm1	100	95.588	Poecilia_formosa
ENSFHEG00000006091	gfm1	99	94.054	ENSPLAG00000019585	gfm1	100	94.663	Poecilia_latipinna
ENSFHEG00000006091	gfm1	100	95.455	ENSPMEG00000012376	gfm1	100	95.455	Poecilia_mexicana
ENSFHEG00000006091	gfm1	100	94.920	ENSPREG00000001332	gfm1	95	94.920	Poecilia_reticulata
ENSFHEG00000006091	gfm1	98	79.728	ENSPPYG00000014244	GFM1	100	78.562	Pongo_abelii
ENSFHEG00000006091	gfm1	94	79.943	ENSPCAG00000008934	GFM1	100	79.943	Procavia_capensis
ENSFHEG00000006091	gfm1	98	79.837	ENSPCOG00000022259	GFM1	100	78.647	Propithecus_coquereli
ENSFHEG00000006091	gfm1	97	80.303	ENSPVAG00000013605	GFM1	96	80.303	Pteropus_vampyrus
ENSFHEG00000006091	gfm1	100	91.845	ENSPNYG00000006037	gfm1	100	91.845	Pundamilia_nyererei
ENSFHEG00000006091	gfm1	100	86.364	ENSPNAG00000001237	gfm1	100	86.364	Pygocentrus_nattereri
ENSFHEG00000006091	gfm1	97	80.690	ENSRNOG00000012873	Gfm1	97	80.690	Rattus_norvegicus
ENSFHEG00000006091	gfm1	98	80.000	ENSRBIG00000031363	GFM1	100	78.828	Rhinopithecus_bieti
ENSFHEG00000006091	gfm1	98	80.136	ENSRROG00000031081	GFM1	100	78.961	Rhinopithecus_roxellana
ENSFHEG00000006091	gfm1	92	57.205	YLR069C	-	90	57.205	Saccharomyces_cerevisiae
ENSFHEG00000006091	gfm1	100	79.228	ENSSBOG00000023252	GFM1	100	79.228	Saimiri_boliviensis_boliviensis
ENSFHEG00000006091	gfm1	97	81.328	ENSSHAG00000017772	GFM1	97	81.103	Sarcophilus_harrisii
ENSFHEG00000006091	gfm1	100	84.112	ENSSFOG00015003117	gfm1	100	84.112	Scleropages_formosus
ENSFHEG00000006091	gfm1	100	88.904	ENSSMAG00000013221	gfm1	100	88.904	Scophthalmus_maximus
ENSFHEG00000006091	gfm1	100	91.043	ENSSDUG00000018665	gfm1	100	91.043	Seriola_dumerili
ENSFHEG00000006091	gfm1	100	90.909	ENSSLDG00000020606	gfm1	100	90.909	Seriola_lalandi_dorsalis
ENSFHEG00000006091	gfm1	99	77.537	ENSSPUG00000018686	GFM1	100	77.537	Sphenodon_punctatus
ENSFHEG00000006091	gfm1	100	92.246	ENSSPAG00000008800	gfm1	100	92.246	Stegastes_partitus
ENSFHEG00000006091	gfm1	96	81.337	ENSSSCG00000025651	GFM1	95	81.337	Sus_scrofa
ENSFHEG00000006091	gfm1	100	87.968	ENSTRUG00000009244	gfm1	100	87.968	Takifugu_rubripes
ENSFHEG00000006091	gfm1	100	90.642	ENSTNIG00000007729	gfm1	100	90.642	Tetraodon_nigroviridis
ENSFHEG00000006091	gfm1	90	72.889	ENSTBEG00000017404	GFM1	89	72.889	Tupaia_belangeri
ENSFHEG00000006091	gfm1	96	81.476	ENSTTRG00000001735	GFM1	95	81.476	Tursiops_truncatus
ENSFHEG00000006091	gfm1	97	81.129	ENSUAMG00000026381	GFM1	96	81.129	Ursus_americanus
ENSFHEG00000006091	gfm1	97	80.992	ENSUMAG00000011268	GFM1	96	80.992	Ursus_maritimus
ENSFHEG00000006091	gfm1	97	77.655	ENSVPAG00000009444	GFM1	96	77.655	Vicugna_pacos
ENSFHEG00000006091	gfm1	98	80.601	ENSVVUG00000020091	GFM1	100	81.361	Vulpes_vulpes
ENSFHEG00000006091	gfm1	100	80.718	ENSXETG00000032551	GFM1	100	80.718	Xenopus_tropicalis
ENSFHEG00000006091	gfm1	54	90.819	ENSXCOG00000012590	gfm1	93	90.819	Xiphophorus_couchianus
ENSFHEG00000006091	gfm1	100	95.053	ENSXMAG00000000261	gfm1	100	95.053	Xiphophorus_maculatus