EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000006172 (Gene tree)
Gene ID: 105933468
Gene Symbol: kars
Alias: cb530|wu:fa16h02|zgc:92483
Full Name: lysyl-tRNA synthetase
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 9510 bases
Position: chrKN811407.1:1379241-1388750
Accession: 105933468
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000005211	tRNA_anti-codon	PF01336.25	3.6e-13	1	1
ENSFHEP00000024549	tRNA_anti-codon	PF01336.25	4.1e-13	1	1
ENSFHEP00000005211	tRNA-synt_2	PF00152.20	1.1e-79	1	1
ENSFHEP00000024549	tRNA-synt_2	PF00152.20	1.3e-79	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000007536	-	2718	XM_012873017	ENSFHEP00000024549	609 (aa)	XP_012728471	UPI000644FC23
ENSFHET00000007550	-	2550	XM_012873018	ENSFHEP00000005211	577 (aa)	XP_012728472	A0A146VYG3

Gene Model

Click here to download ENSFHEG00000006172's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000006172's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000006172	kars	99	78.194	ENSG00000065427	KARS	100	85.294	Homo_sapiens
ENSFHEG00000006172	kars	100	88.562	ENSAPOG00000010997	kars	100	88.562	Acanthochromis_polyacanthus
ENSFHEG00000006172	kars	99	76.712	ENSAMEG00000005347	KARS	93	76.884	Ailuropoda_melanoleuca
ENSFHEG00000006172	kars	100	84.775	ENSACIG00000000304	kars	100	84.775	Amphilophus_citrinellus
ENSFHEG00000006172	kars	98	90.426	ENSAOCG00000012971	kars	98	90.339	Amphiprion_ocellaris
ENSFHEG00000006172	kars	100	90.138	ENSAPEG00000011144	kars	100	90.138	Amphiprion_percula
ENSFHEG00000006172	kars	100	87.716	ENSATEG00000004954	kars	100	87.716	Anabas_testudineus
ENSFHEG00000006172	kars	93	79.182	ENSAPLG00000012705	KARS	91	81.349	Anas_platyrhynchos
ENSFHEG00000006172	kars	98	77.856	ENSACAG00000007577	KARS	89	77.915	Anolis_carolinensis
ENSFHEG00000006172	kars	97	66.259	ENSANAG00000031739	-	93	65.965	Aotus_nancymaae
ENSFHEG00000006172	kars	98	79.685	ENSANAG00000030403	-	96	79.685	Aotus_nancymaae
ENSFHEG00000006172	kars	100	89.255	ENSACLG00000001613	kars	100	88.834	Astatotilapia_calliptera
ENSFHEG00000006172	kars	100	85.986	ENSAMXG00000030719	kars	100	85.986	Astyanax_mexicanus
ENSFHEG00000006172	kars	99	78.082	ENSBTAG00000015677	KARS	75	78.082	Bos_taurus
ENSFHEG00000006172	kars	96	61.470	WBGene00002238	kars-1	97	64.000	Caenorhabditis_elegans
ENSFHEG00000006172	kars	98	80.210	ENSCJAG00000014213	KARS	96	80.385	Callithrix_jacchus
ENSFHEG00000006172	kars	99	77.911	ENSCAFG00000020069	KARS	93	78.082	Canis_familiaris
ENSFHEG00000006172	kars	98	79.510	ENSCAFG00020001721	KARS	96	79.685	Canis_lupus_dingo
ENSFHEG00000006172	kars	96	78.175	ENSCHIG00000016073	-	89	79.323	Capra_hircus
ENSFHEG00000006172	kars	99	78.694	ENSCHIG00000014108	-	98	78.694	Capra_hircus
ENSFHEG00000006172	kars	99	79.304	ENSTSYG00000001643	KARS	98	79.304	Carlito_syrichta
ENSFHEG00000006172	kars	99	72.917	ENSCAPG00000016234	KARS	97	70.579	Cavia_aperea
ENSFHEG00000006172	kars	99	79.210	ENSCPOG00000012036	KARS	98	79.210	Cavia_porcellus
ENSFHEG00000006172	kars	98	79.860	ENSCCAG00000034307	-	96	80.035	Cebus_capucinus
ENSFHEG00000006172	kars	92	65.112	ENSCCAG00000030337	-	98	65.299	Cebus_capucinus
ENSFHEG00000006172	kars	99	76.661	ENSCATG00000038129	KARS	96	77.641	Cercocebus_atys
ENSFHEG00000006172	kars	99	77.645	ENSCLAG00000007905	KARS	98	77.816	Chinchilla_lanigera
ENSFHEG00000006172	kars	98	76.736	ENSCSAG00000003664	KARS	92	76.736	Chlorocebus_sabaeus
ENSFHEG00000006172	kars	79	83.151	ENSCHOG00000013447	KARS	73	83.151	Choloepus_hoffmanni
ENSFHEG00000006172	kars	90	72.254	ENSCPBG00000002553	-	94	72.254	Chrysemys_picta_bellii
ENSFHEG00000006172	kars	99	78.902	ENSCPBG00000026969	KARS	98	78.902	Chrysemys_picta_bellii
ENSFHEG00000006172	kars	100	67.764	ENSCING00000009513	-	100	67.764	Ciona_intestinalis
ENSFHEG00000006172	kars	99	68.531	ENSCSAVG00000007684	-	99	68.531	Ciona_savignyi
ENSFHEG00000006172	kars	55	73.354	ENSCSAVG00000001136	-	100	73.563	Ciona_savignyi
ENSFHEG00000006172	kars	99	73.595	ENSCANG00000032813	KARS	98	73.595	Colobus_angolensis_palliatus
ENSFHEG00000006172	kars	98	80.245	ENSCGRG00001004055	KARS	96	80.420	Cricetulus_griseus_chok1gshd
ENSFHEG00000006172	kars	98	80.245	ENSCGRG00000014242	KARS	96	80.420	Cricetulus_griseus_crigri
ENSFHEG00000006172	kars	99	88.850	ENSCSEG00000008324	kars	99	88.850	Cynoglossus_semilaevis
ENSFHEG00000006172	kars	100	92.201	ENSCVAG00000019686	kars	100	92.201	Cyprinodon_variegatus
ENSFHEG00000006172	kars	100	85.269	ENSDARG00000103799	kars	99	88.350	Danio_rerio
ENSFHEG00000006172	kars	98	78.299	ENSDNOG00000002241	KARS	92	78.819	Dasypus_novemcinctus
ENSFHEG00000006172	kars	99	78.276	ENSDORG00000004780	-	97	78.276	Dipodomys_ordii
ENSFHEG00000006172	kars	96	61.982	ENSDORG00000024214	-	96	61.896	Dipodomys_ordii
ENSFHEG00000006172	kars	98	70.599	FBgn0027084	LysRS	98	70.775	Drosophila_melanogaster
ENSFHEG00000006172	kars	99	78.938	ENSETEG00000008353	KARS	93	78.938	Echinops_telfairi
ENSFHEG00000006172	kars	98	72.261	ENSEBUG00000001284	-	97	72.261	Eptatretus_burgeri
ENSFHEG00000006172	kars	100	78.365	ENSEASG00005013497	KARS	98	78.365	Equus_asinus_asinus
ENSFHEG00000006172	kars	100	78.365	ENSECAG00000013424	KARS	98	78.365	Equus_caballus
ENSFHEG00000006172	kars	99	73.137	ENSEEUG00000007042	KARS	94	72.308	Erinaceus_europaeus
ENSFHEG00000006172	kars	98	79.965	ENSELUG00000014575	kars	97	79.965	Esox_lucius
ENSFHEG00000006172	kars	99	77.241	ENSFCAG00000008573	KARS	96	78.846	Felis_catus
ENSFHEG00000006172	kars	99	77.453	ENSFALG00000002543	KARS	99	77.453	Ficedula_albicollis
ENSFHEG00000006172	kars	99	78.103	ENSFDAG00000007155	KARS	97	78.276	Fukomys_damarensis
ENSFHEG00000006172	kars	98	86.444	ENSGMOG00000002633	kars	99	84.339	Gadus_morhua
ENSFHEG00000006172	kars	98	80.035	ENSGALG00000000907	KARS	99	79.646	Gallus_gallus
ENSFHEG00000006172	kars	100	92.939	ENSGAFG00000017252	kars	100	92.939	Gambusia_affinis
ENSFHEG00000006172	kars	100	87.608	ENSGACG00000015749	kars	100	86.786	Gasterosteus_aculeatus
ENSFHEG00000006172	kars	95	68.909	ENSGAGG00000011960	-	98	71.483	Gopherus_agassizii
ENSFHEG00000006172	kars	99	79.138	ENSGAGG00000023836	KARS	98	79.138	Gopherus_agassizii
ENSFHEG00000006172	kars	99	78.024	ENSGGOG00000005515	KARS	98	78.194	Gorilla_gorilla
ENSFHEG00000006172	kars	100	89.255	ENSHBUG00000013619	kars	100	88.834	Haplochromis_burtoni
ENSFHEG00000006172	kars	99	78.966	ENSHGLG00000011898	KARS	98	79.541	Heterocephalus_glaber_female
ENSFHEG00000006172	kars	99	69.828	ENSHGLG00000015235	-	97	70.172	Heterocephalus_glaber_female
ENSFHEG00000006172	kars	99	63.481	ENSHGLG00000001298	-	97	63.481	Heterocephalus_glaber_female
ENSFHEG00000006172	kars	99	69.655	ENSHGLG00100012523	-	97	70.000	Heterocephalus_glaber_male
ENSFHEG00000006172	kars	99	78.966	ENSHGLG00100012264	KARS	97	78.966	Heterocephalus_glaber_male
ENSFHEG00000006172	kars	99	63.311	ENSHGLG00100006466	-	97	63.311	Heterocephalus_glaber_male
ENSFHEG00000006172	kars	100	88.754	ENSHCOG00000002900	kars	97	88.754	Hippocampus_comes
ENSFHEG00000006172	kars	100	87.175	ENSIPUG00000009862	kars	100	87.175	Ictalurus_punctatus
ENSFHEG00000006172	kars	99	78.336	ENSSTOG00000004205	KARS	97	78.510	Ictidomys_tridecemlineatus
ENSFHEG00000006172	kars	99	78.007	ENSJJAG00000020406	Kars	99	78.351	Jaculus_jaculus
ENSFHEG00000006172	kars	99	89.948	ENSKMAG00000006434	kars	100	89.792	Kryptolebias_marmoratus
ENSFHEG00000006172	kars	100	89.619	ENSLBEG00000026537	kars	100	88.033	Labrus_bergylta
ENSFHEG00000006172	kars	98	78.094	ENSLACG00000006667	KARS	91	82.143	Latimeria_chalumnae
ENSFHEG00000006172	kars	88	75.889	ENSLACG00000016399	-	99	75.889	Latimeria_chalumnae
ENSFHEG00000006172	kars	93	70.849	ENSLOCG00000013608	-	98	70.849	Lepisosteus_oculatus
ENSFHEG00000006172	kars	100	85.492	ENSLOCG00000004002	kars	99	85.492	Lepisosteus_oculatus
ENSFHEG00000006172	kars	99	77.509	ENSLAFG00000015340	KARS	93	77.509	Loxodonta_africana
ENSFHEG00000006172	kars	99	76.320	ENSMFAG00000040024	KARS	98	76.320	Macaca_fascicularis
ENSFHEG00000006172	kars	87	74.175	ENSMNEG00000035832	-	99	74.175	Macaca_nemestrina
ENSFHEG00000006172	kars	99	76.320	ENSMNEG00000042879	-	98	76.320	Macaca_nemestrina
ENSFHEG00000006172	kars	99	76.491	ENSMLEG00000034947	KARS	98	76.491	Mandrillus_leucophaeus
ENSFHEG00000006172	kars	100	88.197	ENSMAMG00000021559	kars	100	88.197	Mastacembelus_armatus
ENSFHEG00000006172	kars	100	89.255	ENSMZEG00005014382	kars	100	88.834	Maylandia_zebra
ENSFHEG00000006172	kars	95	79.310	ENSMGAG00000009000	KARS	98	79.310	Meleagris_gallopavo
ENSFHEG00000006172	kars	99	79.557	ENSMICG00000011997	KARS	98	79.557	Microcebus_murinus
ENSFHEG00000006172	kars	99	79.275	ENSMOCG00000011829	Kars	97	79.275	Microtus_ochrogaster
ENSFHEG00000006172	kars	98	77.368	ENSMOCG00000019029	-	96	77.368	Microtus_ochrogaster
ENSFHEG00000006172	kars	97	88.968	ENSMMOG00000016934	kars	100	88.968	Mola_mola
ENSFHEG00000006172	kars	97	77.032	ENSMODG00000002215	-	98	77.208	Monodelphis_domestica
ENSFHEG00000006172	kars	98	73.860	ENSMODG00000002238	-	86	78.053	Monodelphis_domestica
ENSFHEG00000006172	kars	100	87.716	ENSMALG00000020858	kars	100	87.716	Monopterus_albus
ENSFHEG00000006172	kars	85	79.365	MGP_CAROLIEiJ_G0031588	Kars	97	80.926	Mus_caroli
ENSFHEG00000006172	kars	99	80.484	ENSMUSG00000031948	Kars	97	80.484	Mus_musculus
ENSFHEG00000006172	kars	99	80.311	MGP_PahariEiJ_G0023186	Kars	97	80.311	Mus_pahari
ENSFHEG00000006172	kars	99	80.311	MGP_SPRETEiJ_G0032706	Kars	97	80.311	Mus_spretus
ENSFHEG00000006172	kars	99	77.265	ENSMPUG00000009871	KARS	94	77.436	Mustela_putorius_furo
ENSFHEG00000006172	kars	80	52.368	ENSMLUG00000026871	-	77	52.368	Myotis_lucifugus
ENSFHEG00000006172	kars	98	78.910	ENSMLUG00000015119	-	95	78.910	Myotis_lucifugus
ENSFHEG00000006172	kars	94	80.109	ENSNGAG00000022944	-	94	80.109	Nannospalax_galili
ENSFHEG00000006172	kars	98	80.526	ENSNGAG00000018820	-	96	80.526	Nannospalax_galili
ENSFHEG00000006172	kars	100	89.446	ENSNBRG00000011098	kars	98	89.446	Neolamprologus_brichardi
ENSFHEG00000006172	kars	99	77.853	ENSNLEG00000013072	KARS	98	78.024	Nomascus_leucogenys
ENSFHEG00000006172	kars	97	76.029	ENSMEUG00000008684	KARS	88	78.383	Notamacropus_eugenii
ENSFHEG00000006172	kars	97	79.365	ENSOPRG00000012544	KARS	93	79.189	Ochotona_princeps
ENSFHEG00000006172	kars	99	78.448	ENSODEG00000013099	-	97	78.836	Octodon_degus
ENSFHEG00000006172	kars	97	56.050	ENSODEG00000009464	-	98	56.050	Octodon_degus
ENSFHEG00000006172	kars	100	89.446	ENSONIG00000005937	kars	99	89.446	Oreochromis_niloticus
ENSFHEG00000006172	kars	97	78.407	ENSOANG00000008179	KARS	95	78.407	Ornithorhynchus_anatinus
ENSFHEG00000006172	kars	99	72.867	ENSOCUG00000015553	KARS	98	72.867	Oryctolagus_cuniculus
ENSFHEG00000006172	kars	98	89.046	ENSORLG00000007627	kars	99	87.171	Oryzias_latipes
ENSFHEG00000006172	kars	98	88.869	ENSORLG00020010056	kars	99	87.171	Oryzias_latipes_hni
ENSFHEG00000006172	kars	98	88.869	ENSORLG00015008179	kars	99	87.171	Oryzias_latipes_hsok
ENSFHEG00000006172	kars	99	89.410	ENSOMEG00000001710	kars	99	89.410	Oryzias_melastigma
ENSFHEG00000006172	kars	99	72.603	ENSOGAG00000005903	KARS	93	72.603	Otolemur_garnettii
ENSFHEG00000006172	kars	93	77.920	ENSOARG00000006928	KARS	96	77.920	Ovis_aries
ENSFHEG00000006172	kars	99	77.853	ENSPPAG00000036192	KARS	98	78.024	Pan_paniscus
ENSFHEG00000006172	kars	99	78.045	ENSPPRG00000003027	KARS	98	77.683	Panthera_pardus
ENSFHEG00000006172	kars	99	77.873	ENSPTIG00000008011	KARS	98	77.513	Panthera_tigris_altaica
ENSFHEG00000006172	kars	99	78.024	ENSPTRG00000008364	KARS	98	78.194	Pan_troglodytes
ENSFHEG00000006172	kars	99	76.661	ENSPANG00000024106	KARS	92	76.910	Papio_anubis
ENSFHEG00000006172	kars	100	85.665	ENSPKIG00000009896	kars	100	85.665	Paramormyrops_kingsleyae
ENSFHEG00000006172	kars	92	71.509	ENSPSIG00000003041	-	97	71.509	Pelodiscus_sinensis
ENSFHEG00000006172	kars	96	79.317	ENSPSIG00000009294	KARS	96	79.676	Pelodiscus_sinensis
ENSFHEG00000006172	kars	97	90.179	ENSPMGG00000006117	kars	99	90.179	Periophthalmus_magnuspinnatus
ENSFHEG00000006172	kars	98	80.560	ENSPEMG00000012277	Kars	96	80.560	Peromyscus_maniculatus_bairdii
ENSFHEG00000006172	kars	96	74.820	ENSPMAG00000008360	-	91	74.558	Petromyzon_marinus
ENSFHEG00000006172	kars	97	79.041	ENSPCIG00000010761	-	95	79.041	Phascolarctos_cinereus
ENSFHEG00000006172	kars	98	75.838	ENSPCIG00000025469	-	87	78.383	Phascolarctos_cinereus
ENSFHEG00000006172	kars	100	92.775	ENSPFOG00000013253	kars	100	92.775	Poecilia_formosa
ENSFHEG00000006172	kars	100	92.775	ENSPLAG00000004189	kars	100	92.775	Poecilia_latipinna
ENSFHEG00000006172	kars	100	92.939	ENSPMEG00000015698	kars	100	92.939	Poecilia_mexicana
ENSFHEG00000006172	kars	100	93.241	ENSPREG00000023179	kars	100	93.241	Poecilia_reticulata
ENSFHEG00000006172	kars	97	78.697	ENSPPYG00000007567	KARS	91	79.049	Pongo_abelii
ENSFHEG00000006172	kars	89	74.464	ENSPCAG00000010790	KARS	98	74.464	Procavia_capensis
ENSFHEG00000006172	kars	98	73.451	ENSPCOG00000003166	KARS	85	84.245	Propithecus_coquereli
ENSFHEG00000006172	kars	99	78.411	ENSPVAG00000006746	KARS	93	78.411	Pteropus_vampyrus
ENSFHEG00000006172	kars	100	89.255	ENSPNYG00000013095	kars	100	88.834	Pundamilia_nyererei
ENSFHEG00000006172	kars	100	87.543	ENSPNAG00000013828	kars	100	87.543	Pygocentrus_nattereri
ENSFHEG00000006172	kars	99	78.313	ENSRNOG00000019456	Kars	93	78.657	Rattus_norvegicus
ENSFHEG00000006172	kars	99	76.661	ENSRBIG00000030118	KARS	96	77.641	Rhinopithecus_bieti
ENSFHEG00000006172	kars	98	77.504	ENSRROG00000041418	KARS	96	77.641	Rhinopithecus_roxellana
ENSFHEG00000006172	kars	89	58.509	YDR037W	KRS1	89	58.286	Saccharomyces_cerevisiae
ENSFHEG00000006172	kars	78	34.947	YNL073W	-	82	34.947	Saccharomyces_cerevisiae
ENSFHEG00000006172	kars	98	79.685	ENSSBOG00000019255	KARS	96	79.860	Saimiri_boliviensis_boliviensis
ENSFHEG00000006172	kars	94	68.934	ENSSHAG00000009005	-	96	69.549	Sarcophilus_harrisii
ENSFHEG00000006172	kars	98	64.912	ENSSHAG00000002050	-	87	67.103	Sarcophilus_harrisii
ENSFHEG00000006172	kars	97	74.332	ENSSHAG00000001359	-	98	74.510	Sarcophilus_harrisii
ENSFHEG00000006172	kars	97	87.455	ENSSFOG00015014837	kars	97	87.941	Scleropages_formosus
ENSFHEG00000006172	kars	100	89.273	ENSSMAG00000021441	kars	100	89.273	Scophthalmus_maximus
ENSFHEG00000006172	kars	100	90.311	ENSSDUG00000001202	kars	100	90.311	Seriola_dumerili
ENSFHEG00000006172	kars	98	89.894	ENSSLDG00000021220	kars	98	90.071	Seriola_lalandi_dorsalis
ENSFHEG00000006172	kars	76	84.821	ENSSARG00000011493	KARS	73	84.821	Sorex_araneus
ENSFHEG00000006172	kars	67	64.583	ENSSPUG00000000449	-	86	65.323	Sphenodon_punctatus
ENSFHEG00000006172	kars	99	78.803	ENSSPUG00000004974	KARS	98	78.803	Sphenodon_punctatus
ENSFHEG00000006172	kars	100	89.508	ENSSPAG00000020365	kars	97	90.231	Stegastes_partitus
ENSFHEG00000006172	kars	99	77.931	ENSSSCG00000002704	KARS	98	77.891	Sus_scrofa
ENSFHEG00000006172	kars	97	79.107	ENSTGUG00000008400	KARS	94	81.025	Taeniopygia_guttata
ENSFHEG00000006172	kars	100	82.759	ENSTRUG00000017551	kars	100	82.266	Takifugu_rubripes
ENSFHEG00000006172	kars	91	89.101	ENSTNIG00000009351	kars	97	84.629	Tetraodon_nigroviridis
ENSFHEG00000006172	kars	97	60.954	ENSTBEG00000004610	KARS	93	61.308	Tupaia_belangeri
ENSFHEG00000006172	kars	97	78.230	ENSTTRG00000001221	KARS	90	78.584	Tursiops_truncatus
ENSFHEG00000006172	kars	98	78.459	ENSUAMG00000017557	KARS	96	78.634	Ursus_americanus
ENSFHEG00000006172	kars	99	76.884	ENSUMAG00000014559	KARS	93	77.055	Ursus_maritimus
ENSFHEG00000006172	kars	99	75.556	ENSVPAG00000003716	KARS	94	75.726	Vicugna_pacos
ENSFHEG00000006172	kars	98	79.159	ENSVVUG00000024338	KARS	96	79.888	Vulpes_vulpes
ENSFHEG00000006172	kars	98	80.319	ENSXETG00000003569	kars	99	77.645	Xenopus_tropicalis
ENSFHEG00000006172	kars	97	93.739	ENSXCOG00000011313	kars	100	93.739	Xiphophorus_couchianus
ENSFHEG00000006172	kars	100	93.414	ENSXMAG00000003191	kars	100	93.414	Xiphophorus_maculatus