EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000006237 (Gene tree)
Gene ID: 105926041
Gene Symbol: lsm14b
Alias: zRAP55|zgc:55673
Full Name: LSM family member 14B
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 5044 bases
Position: chrKN811292.1:428553-433596
Accession: 105926041
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000024575	FDF	PF09532.10	4.1e-08	1	1
ENSFHEP00000024575	SM-ATX	PF14438.6	1.7e-08	1	1
ENSFHEP00000024575	LSM14	PF12701.7	5.3e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000007437	-	3420	XM_012862204	ENSFHEP00000024575	367 (aa)	XP_012717658	UPI00064516EE

Gene Model

Click here to download ENSFHEG00000006237's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000006237's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000006237	lsm14b	90	41.085	ENSFHEG00000019482	lsm14aa	85	41.237
ENSFHEG00000006237	lsm14b	77	45.574	ENSFHEG00000003362	LSM14B	75	45.574
ENSFHEG00000006237	lsm14b	93	39.806	ENSFHEG00000021882	lsm14ab	85	42.553

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000006237	lsm14b	100	50.123	ENSG00000149657	LSM14B	100	49.136	Homo_sapiens
ENSFHEG00000006237	lsm14b	100	76.819	ENSAPOG00000001780	lsm14b	100	76.819	Acanthochromis_polyacanthus
ENSFHEG00000006237	lsm14b	99	44.419	ENSAMEG00000013430	LSM14B	99	44.191	Ailuropoda_melanoleuca
ENSFHEG00000006237	lsm14b	99	68.750	ENSACIG00000012266	lsm14b	99	67.663	Amphilophus_citrinellus
ENSFHEG00000006237	lsm14b	61	37.860	ENSACIG00000003147	LSM14B	88	37.500	Amphilophus_citrinellus
ENSFHEG00000006237	lsm14b	98	46.632	ENSAOCG00000006667	LSM14B	90	46.742	Amphiprion_ocellaris
ENSFHEG00000006237	lsm14b	100	76.757	ENSAOCG00000012380	lsm14b	100	76.757	Amphiprion_ocellaris
ENSFHEG00000006237	lsm14b	100	70.109	ENSAPEG00000023633	lsm14b	100	68.022	Amphiprion_percula
ENSFHEG00000006237	lsm14b	65	37.589	ENSATEG00000015895	LSM14B	89	35.333	Anabas_testudineus
ENSFHEG00000006237	lsm14b	100	68.085	ENSATEG00000016603	lsm14b	100	71.011	Anabas_testudineus
ENSFHEG00000006237	lsm14b	81	43.478	ENSAPLG00000013203	LSM14B	90	42.663	Anas_platyrhynchos
ENSFHEG00000006237	lsm14b	91	50.549	ENSACAG00000016195	LSM14B	91	50.275	Anolis_carolinensis
ENSFHEG00000006237	lsm14b	100	49.751	ENSANAG00000037915	LSM14B	100	49.373	Aotus_nancymaae
ENSFHEG00000006237	lsm14b	100	72.581	ENSACLG00000019663	lsm14b	100	72.581	Astatotilapia_calliptera
ENSFHEG00000006237	lsm14b	52	38.278	ENSACLG00000019624	-	68	38.350	Astatotilapia_calliptera
ENSFHEG00000006237	lsm14b	53	36.916	ENSACLG00000011955	-	67	36.893	Astatotilapia_calliptera
ENSFHEG00000006237	lsm14b	90	51.882	ENSAMXG00000002865	lsm14b	91	57.341	Astyanax_mexicanus
ENSFHEG00000006237	lsm14b	100	44.820	ENSBTAG00000021558	LSM14B	100	45.824	Bos_taurus
ENSFHEG00000006237	lsm14b	100	50.251	ENSCJAG00000014434	LSM14B	100	49.123	Callithrix_jacchus
ENSFHEG00000006237	lsm14b	89	41.604	ENSCAFG00000012518	LSM14B	98	41.895	Canis_familiaris
ENSFHEG00000006237	lsm14b	100	49.749	ENSCAFG00020022150	LSM14B	100	49.254	Canis_lupus_dingo
ENSFHEG00000006237	lsm14b	100	49.383	ENSCHIG00000010284	-	100	49.624	Capra_hircus
ENSFHEG00000006237	lsm14b	99	41.013	ENSCHIG00000022681	-	91	41.989	Capra_hircus
ENSFHEG00000006237	lsm14b	88	46.133	ENSTSYG00000031914	LSM14B	89	45.304	Carlito_syrichta
ENSFHEG00000006237	lsm14b	81	47.130	ENSCAPG00000013059	LSM14B	100	47.175	Cavia_aperea
ENSFHEG00000006237	lsm14b	80	47.273	ENSCPOG00000038080	LSM14B	100	47.309	Cavia_porcellus
ENSFHEG00000006237	lsm14b	100	49.751	ENSCCAG00000021267	LSM14B	100	49.373	Cebus_capucinus
ENSFHEG00000006237	lsm14b	92	35.833	ENSCCAG00000024900	-	84	35.309	Cebus_capucinus
ENSFHEG00000006237	lsm14b	100	50.000	ENSCATG00000036006	LSM14B	100	48.768	Cercocebus_atys
ENSFHEG00000006237	lsm14b	80	48.297	ENSCLAG00000003186	LSM14B	100	47.309	Chinchilla_lanigera
ENSFHEG00000006237	lsm14b	100	47.430	ENSCSAG00000015729	LSM14B	100	46.495	Chlorocebus_sabaeus
ENSFHEG00000006237	lsm14b	68	33.808	ENSCHOG00000006997	-	100	33.808	Choloepus_hoffmanni
ENSFHEG00000006237	lsm14b	91	46.135	ENSCPBG00000027065	LSM14B	92	45.387	Chrysemys_picta_bellii
ENSFHEG00000006237	lsm14b	88	46.133	ENSCANG00000036986	LSM14B	100	45.580	Colobus_angolensis_palliatus
ENSFHEG00000006237	lsm14b	100	48.642	ENSCGRG00001018399	Lsm14b	100	49.383	Cricetulus_griseus_chok1gshd
ENSFHEG00000006237	lsm14b	60	35.959	ENSCGRG00000006111	-	92	36.986	Cricetulus_griseus_crigri
ENSFHEG00000006237	lsm14b	60	40.000	ENSCGRG00000002484	-	95	38.750	Cricetulus_griseus_crigri
ENSFHEG00000006237	lsm14b	95	45.187	ENSCSEG00000020669	LSM14B	91	45.892	Cynoglossus_semilaevis
ENSFHEG00000006237	lsm14b	100	67.819	ENSCSEG00000004722	lsm14b	100	67.819	Cynoglossus_semilaevis
ENSFHEG00000006237	lsm14b	64	35.484	ENSCVAG00000012433	-	88	34.322	Cyprinodon_variegatus
ENSFHEG00000006237	lsm14b	99	54.359	ENSDARG00000025386	lsm14b	91	55.000	Danio_rerio
ENSFHEG00000006237	lsm14b	60	37.671	ENSDNOG00000025246	LSM14B	100	37.346	Dasypus_novemcinctus
ENSFHEG00000006237	lsm14b	81	47.147	ENSDORG00000016683	Lsm14b	100	37.778	Dipodomys_ordii
ENSFHEG00000006237	lsm14b	92	41.389	ENSETEG00000001869	-	90	41.525	Echinops_telfairi
ENSFHEG00000006237	lsm14b	57	37.118	ENSETEG00000011188	-	94	37.555	Echinops_telfairi
ENSFHEG00000006237	lsm14b	68	41.026	ENSEASG00005023218	LSM14B	100	41.026	Equus_asinus_asinus
ENSFHEG00000006237	lsm14b	100	50.000	ENSECAG00000010659	LSM14B	100	50.000	Equus_caballus
ENSFHEG00000006237	lsm14b	90	50.000	ENSELUG00000016299	LSM14B	91	50.559	Esox_lucius
ENSFHEG00000006237	lsm14b	98	57.292	ENSELUG00000005780	lsm14b	91	57.507	Esox_lucius
ENSFHEG00000006237	lsm14b	100	49.502	ENSFCAG00000003248	LSM14B	100	51.005	Felis_catus
ENSFHEG00000006237	lsm14b	81	43.324	ENSFALG00000010618	LSM14B	92	42.507	Ficedula_albicollis
ENSFHEG00000006237	lsm14b	88	46.409	ENSFDAG00000002214	LSM14B	100	45.304	Fukomys_damarensis
ENSFHEG00000006237	lsm14b	100	60.322	ENSGMOG00000017115	lsm14b	99	59.786	Gadus_morhua
ENSFHEG00000006237	lsm14b	91	50.678	ENSGALG00000005125	LSM14B	91	52.055	Gallus_gallus
ENSFHEG00000006237	lsm14b	64	39.600	ENSGAFG00000013723	LSM14B	87	38.627	Gambusia_affinis
ENSFHEG00000006237	lsm14b	100	73.118	ENSGAFG00000020318	lsm14b	100	73.118	Gambusia_affinis
ENSFHEG00000006237	lsm14b	99	68.280	ENSGACG00000009973	lsm14b	99	68.280	Gasterosteus_aculeatus
ENSFHEG00000006237	lsm14b	52	38.785	ENSGAGG00000004106	LSM14B	78	38.785	Gopherus_agassizii
ENSFHEG00000006237	lsm14b	90	46.196	ENSGGOG00000005630	LSM14B	95	45.109	Gorilla_gorilla
ENSFHEG00000006237	lsm14b	100	49.624	ENSHGLG00000015055	LSM14B	100	49.622	Heterocephalus_glaber_female
ENSFHEG00000006237	lsm14b	88	45.609	ENSHGLG00100015273	LSM14B	100	45.584	Heterocephalus_glaber_male
ENSFHEG00000006237	lsm14b	68	51.562	ENSHCOG00000004867	lsm14b	100	50.584	Hippocampus_comes
ENSFHEG00000006237	lsm14b	94	44.865	ENSHCOG00000018747	LSM14B	91	44.350	Hippocampus_comes
ENSFHEG00000006237	lsm14b	90	53.482	ENSIPUG00000014946	lsm14b	86	57.183	Ictalurus_punctatus
ENSFHEG00000006237	lsm14b	88	46.742	ENSSTOG00000020482	LSM14B	100	46.742	Ictidomys_tridecemlineatus
ENSFHEG00000006237	lsm14b	99	50.500	ENSJJAG00000012728	Lsm14b	99	50.500	Jaculus_jaculus
ENSFHEG00000006237	lsm14b	51	35.211	ENSKMAG00000012834	-	88	38.679	Kryptolebias_marmoratus
ENSFHEG00000006237	lsm14b	100	71.429	ENSKMAG00000017524	lsm14b	100	72.237	Kryptolebias_marmoratus
ENSFHEG00000006237	lsm14b	68	35.926	ENSLBEG00000007951	LSM14B	86	34.728	Labrus_bergylta
ENSFHEG00000006237	lsm14b	89	73.944	ENSLACG00000003849	LSM14B	93	46.535	Latimeria_chalumnae
ENSFHEG00000006237	lsm14b	99	52.685	ENSLOCG00000003746	lsm14b	99	55.499	Lepisosteus_oculatus
ENSFHEG00000006237	lsm14b	89	46.518	ENSLAFG00000007492	LSM14B	100	46.240	Loxodonta_africana
ENSFHEG00000006237	lsm14b	100	49.877	ENSMFAG00000041479	LSM14B	100	48.889	Macaca_fascicularis
ENSFHEG00000006237	lsm14b	100	49.877	ENSMMUG00000014084	LSM14B	100	48.889	Macaca_mulatta
ENSFHEG00000006237	lsm14b	100	49.877	ENSMNEG00000045573	LSM14B	100	48.889	Macaca_nemestrina
ENSFHEG00000006237	lsm14b	88	46.281	ENSMLEG00000040895	LSM14B	100	45.179	Mandrillus_leucophaeus
ENSFHEG00000006237	lsm14b	100	71.658	ENSMAMG00000020539	lsm14b	100	71.658	Mastacembelus_armatus
ENSFHEG00000006237	lsm14b	94	49.307	ENSMAMG00000024124	LSM14B	90	48.011	Mastacembelus_armatus
ENSFHEG00000006237	lsm14b	90	45.580	ENSMZEG00005026001	LSM14B	94	47.368	Maylandia_zebra
ENSFHEG00000006237	lsm14b	100	72.849	ENSMZEG00005000987	lsm14b	100	72.849	Maylandia_zebra
ENSFHEG00000006237	lsm14b	82	46.041	ENSMGAG00000005300	LSM14B	90	45.748	Meleagris_gallopavo
ENSFHEG00000006237	lsm14b	100	50.126	ENSMAUG00000020700	Lsm14b	100	49.874	Mesocricetus_auratus
ENSFHEG00000006237	lsm14b	100	50.249	ENSMICG00000014675	LSM14B	100	50.750	Microcebus_murinus
ENSFHEG00000006237	lsm14b	100	50.123	ENSMOCG00000020600	Lsm14b	100	49.877	Microtus_ochrogaster
ENSFHEG00000006237	lsm14b	52	39.906	ENSMOCG00000005119	-	93	37.405	Microtus_ochrogaster
ENSFHEG00000006237	lsm14b	89	63.611	ENSMMOG00000020042	lsm14b	94	63.836	Mola_mola
ENSFHEG00000006237	lsm14b	90	49.855	ENSMMOG00000017321	LSM14B	90	49.133	Mola_mola
ENSFHEG00000006237	lsm14b	60	38.947	ENSMODG00000016690	LSM14B	89	37.324	Monodelphis_domestica
ENSFHEG00000006237	lsm14b	90	46.240	ENSMALG00000022251	LSM14B	91	45.730	Monopterus_albus
ENSFHEG00000006237	lsm14b	100	71.200	ENSMALG00000004783	lsm14b	97	71.733	Monopterus_albus
ENSFHEG00000006237	lsm14b	100	50.123	MGP_CAROLIEiJ_G0024770	Lsm14b	100	51.010	Mus_caroli
ENSFHEG00000006237	lsm14b	100	50.123	ENSMUSG00000039108	Lsm14b	100	51.010	Mus_musculus
ENSFHEG00000006237	lsm14b	100	50.123	MGP_PahariEiJ_G0026214	Lsm14b	100	51.010	Mus_pahari
ENSFHEG00000006237	lsm14b	100	50.123	MGP_SPRETEiJ_G0025693	Lsm14b	100	51.010	Mus_spretus
ENSFHEG00000006237	lsm14b	94	41.330	ENSMPUG00000007584	LSM14B	100	41.687	Mustela_putorius_furo
ENSFHEG00000006237	lsm14b	91	51.648	ENSMLUG00000000304	LSM14B	100	50.877	Myotis_lucifugus
ENSFHEG00000006237	lsm14b	59	37.751	ENSNGAG00000016550	Lsm14b	100	39.357	Nannospalax_galili
ENSFHEG00000006237	lsm14b	80	47.273	ENSNLEG00000015757	LSM14B	100	45.028	Nomascus_leucogenys
ENSFHEG00000006237	lsm14b	66	70.629	ENSMEUG00000008267	-	66	70.629	Notamacropus_eugenii
ENSFHEG00000006237	lsm14b	100	50.251	ENSODEG00000004099	LSM14B	100	50.505	Octodon_degus
ENSFHEG00000006237	lsm14b	100	73.925	ENSONIG00000020318	lsm14b	100	73.925	Oreochromis_niloticus
ENSFHEG00000006237	lsm14b	74	52.158	ENSOANG00000003370	LSM14B	96	51.799	Ornithorhynchus_anatinus
ENSFHEG00000006237	lsm14b	81	47.561	ENSOCUG00000006279	LSM14B	100	46.111	Oryctolagus_cuniculus
ENSFHEG00000006237	lsm14b	100	74.457	ENSORLG00000013525	lsm14b	100	74.457	Oryzias_latipes
ENSFHEG00000006237	lsm14b	92	43.143	ENSORLG00000028353	LSM14B	90	42.816	Oryzias_latipes
ENSFHEG00000006237	lsm14b	100	74.457	ENSORLG00020020553	lsm14b	100	74.457	Oryzias_latipes_hni
ENSFHEG00000006237	lsm14b	62	32.171	ENSORLG00020018191	-	85	33.200	Oryzias_latipes_hni
ENSFHEG00000006237	lsm14b	100	74.457	ENSORLG00015016862	lsm14b	100	74.457	Oryzias_latipes_hsok
ENSFHEG00000006237	lsm14b	92	43.429	ENSORLG00015013157	LSM14B	90	43.103	Oryzias_latipes_hsok
ENSFHEG00000006237	lsm14b	100	74.797	ENSOMEG00000023917	lsm14b	100	74.797	Oryzias_melastigma
ENSFHEG00000006237	lsm14b	64	36.032	ENSOMEG00000000171	-	85	35.931	Oryzias_melastigma
ENSFHEG00000006237	lsm14b	100	46.495	ENSOGAG00000003915	LSM14B	100	46.171	Otolemur_garnettii
ENSFHEG00000006237	lsm14b	90	40.342	ENSOARG00000014706	LSM14B	98	43.216	Ovis_aries
ENSFHEG00000006237	lsm14b	90	46.196	ENSPPAG00000035799	LSM14B	95	45.109	Pan_paniscus
ENSFHEG00000006237	lsm14b	100	49.502	ENSPPRG00000009197	LSM14B	100	51.005	Panthera_pardus
ENSFHEG00000006237	lsm14b	60	41.494	ENSPTIG00000021518	LSM14B	92	38.246	Panthera_tigris_altaica
ENSFHEG00000006237	lsm14b	100	50.123	ENSPTRG00000013696	LSM14B	100	49.136	Pan_troglodytes
ENSFHEG00000006237	lsm14b	100	49.507	ENSPANG00000011747	LSM14B	100	48.529	Papio_anubis
ENSFHEG00000006237	lsm14b	91	57.507	ENSPKIG00000003275	lsm14b	85	83.696	Paramormyrops_kingsleyae
ENSFHEG00000006237	lsm14b	81	46.847	ENSPSIG00000014762	LSM14B	91	46.364	Pelodiscus_sinensis
ENSFHEG00000006237	lsm14b	99	50.000	ENSPEMG00000017688	Lsm14b	99	49.750	Peromyscus_maniculatus_bairdii
ENSFHEG00000006237	lsm14b	92	51.507	ENSPCIG00000013405	LSM14B	92	50.959	Phascolarctos_cinereus
ENSFHEG00000006237	lsm14b	100	80.270	ENSPFOG00000005631	lsm14b	100	80.270	Poecilia_formosa
ENSFHEG00000006237	lsm14b	100	79.459	ENSPLAG00000002449	lsm14b	100	79.459	Poecilia_latipinna
ENSFHEG00000006237	lsm14b	89	47.941	ENSPLAG00000005793	LSM14B	90	46.667	Poecilia_latipinna
ENSFHEG00000006237	lsm14b	88	48.387	ENSPMEG00000022953	LSM14B	90	47.126	Poecilia_mexicana
ENSFHEG00000006237	lsm14b	100	80.541	ENSPMEG00000000745	lsm14b	100	80.541	Poecilia_mexicana
ENSFHEG00000006237	lsm14b	61	37.354	ENSPREG00000007828	LSM14B	87	36.328	Poecilia_reticulata
ENSFHEG00000006237	lsm14b	100	47.901	ENSPPYG00000011194	LSM14B	100	47.901	Pongo_abelii
ENSFHEG00000006237	lsm14b	100	50.370	ENSPCOG00000013625	LSM14B	100	49.383	Propithecus_coquereli
ENSFHEG00000006237	lsm14b	70	40.070	ENSPVAG00000017918	LSM14B	100	42.462	Pteropus_vampyrus
ENSFHEG00000006237	lsm14b	90	54.023	ENSPNAG00000012777	lsm14b	91	56.497	Pygocentrus_nattereri
ENSFHEG00000006237	lsm14b	100	46.396	ENSRNOG00000054557	Lsm14b	100	46.171	Rattus_norvegicus
ENSFHEG00000006237	lsm14b	89	46.006	ENSRBIG00000033461	LSM14B	99	44.904	Rhinopithecus_bieti
ENSFHEG00000006237	lsm14b	90	47.154	ENSRROG00000042949	LSM14B	100	37.338	Rhinopithecus_roxellana
ENSFHEG00000006237	lsm14b	88	46.240	ENSSBOG00000032820	LSM14B	100	45.787	Saimiri_boliviensis_boliviensis
ENSFHEG00000006237	lsm14b	81	48.773	ENSSHAG00000015528	LSM14B	87	48.160	Sarcophilus_harrisii
ENSFHEG00000006237	lsm14b	90	56.686	ENSSFOG00015004627	lsm14b	92	55.556	Scleropages_formosus
ENSFHEG00000006237	lsm14b	94	47.090	ENSSMAG00000000135	LSM14B	90	45.628	Scophthalmus_maximus
ENSFHEG00000006237	lsm14b	100	72.606	ENSSMAG00000012725	lsm14b	100	72.606	Scophthalmus_maximus
ENSFHEG00000006237	lsm14b	90	50.000	ENSSDUG00000022770	LSM14B	91	49.857	Seriola_dumerili
ENSFHEG00000006237	lsm14b	100	75.668	ENSSDUG00000020977	lsm14b	100	75.668	Seriola_dumerili
ENSFHEG00000006237	lsm14b	61	42.578	ENSSLDG00000011354	-	89	40.927	Seriola_lalandi_dorsalis
ENSFHEG00000006237	lsm14b	50	36.150	ENSSARG00000007749	-	96	36.620	Sorex_araneus
ENSFHEG00000006237	lsm14b	99	46.682	ENSSPUG00000014360	LSM14B	99	47.018	Sphenodon_punctatus
ENSFHEG00000006237	lsm14b	65	35.165	ENSSPAG00000018854	-	88	34.646	Stegastes_partitus
ENSFHEG00000006237	lsm14b	100	73.784	ENSSPAG00000020915	lsm14b	100	72.973	Stegastes_partitus
ENSFHEG00000006237	lsm14b	92	50.273	ENSSSCG00000026052	LSM14B	100	36.593	Sus_scrofa
ENSFHEG00000006237	lsm14b	81	48.780	ENSTGUG00000007884	LSM14B	91	47.866	Taeniopygia_guttata
ENSFHEG00000006237	lsm14b	91	47.922	ENSTRUG00000001529	LSM14B	91	49.575	Takifugu_rubripes
ENSFHEG00000006237	lsm14b	100	68.194	ENSTRUG00000011354	lsm14b	100	68.194	Takifugu_rubripes
ENSFHEG00000006237	lsm14b	100	63.706	ENSTNIG00000002445	lsm14b	100	61.616	Tetraodon_nigroviridis
ENSFHEG00000006237	lsm14b	83	78.571	ENSTTRG00000011043	LSM14B	82	78.571	Tursiops_truncatus
ENSFHEG00000006237	lsm14b	97	43.909	ENSUAMG00000025298	LSM14B	99	43.401	Ursus_americanus
ENSFHEG00000006237	lsm14b	97	43.909	ENSUMAG00000000480	LSM14B	99	43.401	Ursus_maritimus
ENSFHEG00000006237	lsm14b	89	46.369	ENSVVUG00000015920	LSM14B	98	45.856	Vulpes_vulpes
ENSFHEG00000006237	lsm14b	85	50.877	ENSXETG00000001997	lsm14b	99	51.613	Xenopus_tropicalis
ENSFHEG00000006237	lsm14b	100	78.437	ENSXMAG00000010013	lsm14b	100	78.437	Xiphophorus_maculatus