EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000006539 (Gene tree)
Gene ID: 105938024
Gene Symbol: -
Alias: -
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 30424 bases
Position: chrKN811531.1:907992-938415
Accession: 105938024
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000005543	KH_1	PF00013.29	1.5e-48	1	3
ENSFHEP00000005543	KH_1	PF00013.29	1.5e-48	2	3
ENSFHEP00000005543	KH_1	PF00013.29	1.5e-48	3	3
ENSFHEP00000005543	KH_2	PF07650.17	1.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000006985	-	960	XM_021307091	ENSFHEP00000005543	319 (aa)	XP_021162766	-

Gene Model

Click here to download ENSFHEG00000006539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000006539's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000006539	-	88	40.845	ENSFHEG00000004626	nova1	53	40.845
ENSFHEG00000006539	-	92	34.028	ENSFHEG00000008263	igf2bp2a	70	36.923
ENSFHEG00000006539	-	80	71.134	ENSFHEG00000016024	PCBP2	94	71.134
ENSFHEG00000006539	-	94	65.559	ENSFHEG00000018838	-	90	73.980
ENSFHEG00000006539	-	99	75.000	ENSFHEG00000009608	pcbp2	99	75.000
ENSFHEG00000006539	-	66	37.333	ENSFHEG00000005230	fubp1	57	30.070
ENSFHEG00000006539	-	87	39.062	ENSFHEG00000003957	fubp3	71	38.462
ENSFHEG00000006539	-	97	94.855	ENSFHEG00000016615	pcbp3	96	94.855
ENSFHEG00000006539	-	87	46.809	ENSFHEG00000002769	-	69	46.809
ENSFHEG00000006539	-	73	52.055	ENSFHEG00000022225	hnrnpk	52	52.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000006539	-	99	93.671	ENSAPOG00000020003	pcbp3	89	93.671	Acanthochromis_polyacanthus
ENSFHEG00000006539	-	100	96.296	ENSAPOG00000016582	-	100	96.296	Acanthochromis_polyacanthus
ENSFHEG00000006539	-	99	89.318	ENSAMEG00000001697	-	99	85.227	Ailuropoda_melanoleuca
ENSFHEG00000006539	-	99	87.097	ENSACIG00000010933	pcbp3	98	87.097	Amphilophus_citrinellus
ENSFHEG00000006539	-	100	95.399	ENSACIG00000002739	-	100	95.399	Amphilophus_citrinellus
ENSFHEG00000006539	-	97	94.839	ENSAOCG00000008592	-	98	94.839	Amphiprion_ocellaris
ENSFHEG00000006539	-	88	95.222	ENSAOCG00000007806	-	100	95.222	Amphiprion_ocellaris
ENSFHEG00000006539	-	97	87.500	ENSAPEG00000008011	pcbp3	95	87.500	Amphiprion_percula
ENSFHEG00000006539	-	100	97.806	ENSAPEG00000005209	-	100	97.806	Amphiprion_percula
ENSFHEG00000006539	-	97	88.822	ENSATEG00000015787	-	100	88.822	Anabas_testudineus
ENSFHEG00000006539	-	100	97.806	ENSATEG00000009833	-	100	97.806	Anabas_testudineus
ENSFHEG00000006539	-	95	75.568	ENSAPLG00000008951	-	79	75.568	Anas_platyrhynchos
ENSFHEG00000006539	-	99	90.663	ENSAPLG00000002975	-	99	90.663	Anas_platyrhynchos
ENSFHEG00000006539	-	99	80.758	ENSACAG00000009819	-	99	80.758	Anolis_carolinensis
ENSFHEG00000006539	-	99	83.657	ENSACAG00000004607	-	99	83.657	Anolis_carolinensis
ENSFHEG00000006539	-	75	97.059	ENSANAG00000030702	-	100	97.059	Aotus_nancymaae
ENSFHEG00000006539	-	99	85.797	ENSACLG00000011835	pcbp3	98	85.797	Astatotilapia_calliptera
ENSFHEG00000006539	-	100	96.865	ENSACLG00000003801	-	100	96.865	Astatotilapia_calliptera
ENSFHEG00000006539	-	95	69.207	ENSAMXG00000001760	zgc:110045	72	69.207	Astyanax_mexicanus
ENSFHEG00000006539	-	97	89.222	ENSAMXG00000003440	pcbp3	95	89.222	Astyanax_mexicanus
ENSFHEG00000006539	-	97	92.857	ENSAMXG00000013588	-	100	92.857	Astyanax_mexicanus
ENSFHEG00000006539	-	92	93.562	ENSCAFG00020019472	-	83	93.562	Canis_lupus_dingo
ENSFHEG00000006539	-	99	94.969	ENSCSAG00000007440	-	90	94.969	Chlorocebus_sabaeus
ENSFHEG00000006539	-	96	95.130	ENSCPBG00000012151	-	99	89.349	Chrysemys_picta_bellii
ENSFHEG00000006539	-	97	80.480	ENSCPBG00000000733	-	74	79.525	Chrysemys_picta_bellii
ENSFHEG00000006539	-	100	79.420	ENSCSEG00000016984	-	100	79.420	Cynoglossus_semilaevis
ENSFHEG00000006539	-	97	94.156	ENSCSEG00000000822	pcbp3	99	94.156	Cynoglossus_semilaevis
ENSFHEG00000006539	-	100	99.373	ENSCVAG00000005262	-	100	99.373	Cyprinodon_variegatus
ENSFHEG00000006539	-	97	87.202	ENSCVAG00000014482	pcbp3	95	87.202	Cyprinodon_variegatus
ENSFHEG00000006539	-	100	90.407	ENSDARG00000054378	pcbp3	100	90.407	Danio_rerio
ENSFHEG00000006539	-	99	83.962	ENSETEG00000015988	-	99	83.962	Echinops_telfairi
ENSFHEG00000006539	-	92	67.206	ENSEBUG00000005495	pcbp3	74	67.206	Eptatretus_burgeri
ENSFHEG00000006539	-	97	78.864	ENSEBUG00000007485	-	94	77.093	Eptatretus_burgeri
ENSFHEG00000006539	-	87	73.571	ENSEBUG00000016192	pcbp3	99	73.978	Eptatretus_burgeri
ENSFHEG00000006539	-	98	89.241	ENSELUG00000003521	pcbp3	98	89.241	Esox_lucius
ENSFHEG00000006539	-	97	95.498	ENSELUG00000001560	-	99	84.746	Esox_lucius
ENSFHEG00000006539	-	99	94.025	ENSFALG00000003949	-	99	94.025	Ficedula_albicollis
ENSFHEG00000006539	-	95	75.852	ENSFALG00000004411	-	74	75.852	Ficedula_albicollis
ENSFHEG00000006539	-	97	78.507	ENSGMOG00000011992	pcbp3	97	78.507	Gadus_morhua
ENSFHEG00000006539	-	96	70.909	ENSGMOG00000008611	-	99	70.909	Gadus_morhua
ENSFHEG00000006539	-	99	83.844	ENSGALG00000004394	-	98	89.674	Gallus_gallus
ENSFHEG00000006539	-	97	81.024	ENSGALG00000013155	-	99	81.024	Gallus_gallus
ENSFHEG00000006539	-	100	85.088	ENSGAFG00000011430	pcbp3	99	85.088	Gambusia_affinis
ENSFHEG00000006539	-	97	96.463	ENSGAFG00000010274	-	95	96.463	Gambusia_affinis
ENSFHEG00000006539	-	100	77.473	ENSGACG00000014955	-	100	77.473	Gasterosteus_aculeatus
ENSFHEG00000006539	-	100	89.474	ENSGACG00000002266	-	100	89.474	Gasterosteus_aculeatus
ENSFHEG00000006539	-	84	89.513	ENSGAGG00000000271	-	100	89.513	Gopherus_agassizii
ENSFHEG00000006539	-	79	89.062	ENSGAGG00000006956	-	78	89.062	Gopherus_agassizii
ENSFHEG00000006539	-	97	94.855	ENSHBUG00000010697	pcbp3	98	94.855	Haplochromis_burtoni
ENSFHEG00000006539	-	100	96.865	ENSHBUG00000021782	-	100	96.865	Haplochromis_burtoni
ENSFHEG00000006539	-	97	87.463	ENSHCOG00000017868	pcbp3	95	87.463	Hippocampus_comes
ENSFHEG00000006539	-	100	91.277	ENSHCOG00000006067	-	100	91.277	Hippocampus_comes
ENSFHEG00000006539	-	100	96.865	ENSIPUG00000006238	pcbp3	100	96.865	Ictalurus_punctatus
ENSFHEG00000006539	-	97	95.177	ENSKMAG00000018530	-	100	90.214	Kryptolebias_marmoratus
ENSFHEG00000006539	-	97	87.500	ENSKMAG00000003046	pcbp3	95	87.500	Kryptolebias_marmoratus
ENSFHEG00000006539	-	99	93.671	ENSLBEG00000006201	pcbp3	98	93.671	Labrus_bergylta
ENSFHEG00000006539	-	100	83.333	ENSLBEG00000006542	-	100	83.333	Labrus_bergylta
ENSFHEG00000006539	-	96	81.638	ENSLACG00000010386	pcbp3	74	81.638	Latimeria_chalumnae
ENSFHEG00000006539	-	97	74.930	ENSLACG00000010804	zgc:110045	75	74.930	Latimeria_chalumnae
ENSFHEG00000006539	-	99	89.645	ENSLOCG00000009369	pcbp3	99	89.645	Lepisosteus_oculatus
ENSFHEG00000006539	-	95	80.734	ENSLOCG00000005058	zgc:110045	80	80.734	Lepisosteus_oculatus
ENSFHEG00000006539	-	100	96.552	ENSMAMG00000011620	-	100	96.552	Mastacembelus_armatus
ENSFHEG00000006539	-	97	95.130	ENSMAMG00000022336	pcbp3	93	95.130	Mastacembelus_armatus
ENSFHEG00000006539	-	97	88.750	ENSMZEG00005014882	-	100	85.345	Maylandia_zebra
ENSFHEG00000006539	-	99	86.919	ENSMZEG00005008993	pcbp3	98	87.761	Maylandia_zebra
ENSFHEG00000006539	-	96	79.083	ENSMGAG00000001883	-	96	79.370	Meleagris_gallopavo
ENSFHEG00000006539	-	97	75.419	ENSMGAG00000006794	-	75	75.419	Meleagris_gallopavo
ENSFHEG00000006539	-	97	92.308	ENSMMOG00000000730	pcbp3	88	92.308	Mola_mola
ENSFHEG00000006539	-	100	96.552	ENSMMOG00000005216	-	100	96.552	Mola_mola
ENSFHEG00000006539	-	71	78.037	ENSMODG00000027884	-	93	78.037	Monodelphis_domestica
ENSFHEG00000006539	-	96	88.520	ENSMALG00000000691	pcbp3	98	85.852	Monopterus_albus
ENSFHEG00000006539	-	99	86.310	ENSMPUG00000001779	-	91	86.310	Mustela_putorius_furo
ENSFHEG00000006539	-	99	86.510	ENSNBRG00000016409	-	98	86.510	Neolamprologus_brichardi
ENSFHEG00000006539	-	98	88.754	ENSNBRG00000016714	-	99	88.754	Neolamprologus_brichardi
ENSFHEG00000006539	-	94	83.090	ENSOPRG00000003431	-	99	83.090	Ochotona_princeps
ENSFHEG00000006539	-	97	82.720	ENSONIG00000012122	-	98	82.720	Oreochromis_niloticus
ENSFHEG00000006539	-	100	96.262	ENSONIG00000004611	-	100	96.262	Oreochromis_niloticus
ENSFHEG00000006539	-	99	94.025	ENSOCUG00000002696	-	90	94.025	Oryctolagus_cuniculus
ENSFHEG00000006539	-	100	96.573	ENSORLG00000022739	-	100	96.573	Oryzias_latipes
ENSFHEG00000006539	-	97	94.839	ENSORLG00000000059	pcbp3	100	94.839	Oryzias_latipes
ENSFHEG00000006539	-	100	96.865	ENSORLG00020006124	-	100	96.865	Oryzias_latipes_hni
ENSFHEG00000006539	-	99	93.417	ENSORLG00020012671	pcbp3	99	93.417	Oryzias_latipes_hni
ENSFHEG00000006539	-	99	94.688	ENSORLG00015008051	-	98	94.688	Oryzias_latipes_hsok
ENSFHEG00000006539	-	99	93.417	ENSORLG00015000429	pcbp3	99	93.417	Oryzias_latipes_hsok
ENSFHEG00000006539	-	90	95.486	ENSOMEG00000020811	pcbp3	99	95.486	Oryzias_melastigma
ENSFHEG00000006539	-	100	96.552	ENSOMEG00000020162	-	100	96.552	Oryzias_melastigma
ENSFHEG00000006539	-	99	81.868	ENSOGAG00000008044	-	99	81.868	Otolemur_garnettii
ENSFHEG00000006539	-	78	85.106	ENSPKIG00000020913	-	82	85.106	Paramormyrops_kingsleyae
ENSFHEG00000006539	-	100	95.925	ENSPKIG00000019329	pcbp3	100	95.925	Paramormyrops_kingsleyae
ENSFHEG00000006539	-	70	81.301	ENSPSIG00000008350	-	68	81.301	Pelodiscus_sinensis
ENSFHEG00000006539	-	99	81.250	ENSPSIG00000014970	-	99	81.845	Pelodiscus_sinensis
ENSFHEG00000006539	-	96	87.952	ENSPMGG00000022383	pcbp3	95	87.952	Periophthalmus_magnuspinnatus
ENSFHEG00000006539	-	77	84.574	ENSPMAG00000004637	-	97	84.574	Petromyzon_marinus
ENSFHEG00000006539	-	97	71.384	ENSPMAG00000004551	pcbp3	91	71.384	Petromyzon_marinus
ENSFHEG00000006539	-	99	88.270	ENSPCIG00000028092	-	99	88.270	Phascolarctos_cinereus
ENSFHEG00000006539	-	99	93.293	ENSPLAG00000004074	-	92	93.293	Poecilia_latipinna
ENSFHEG00000006539	-	100	80.278	ENSPLAG00000011449	pcbp3	91	80.278	Poecilia_latipinna
ENSFHEG00000006539	-	100	84.012	ENSPMEG00000021239	pcbp3	95	87.202	Poecilia_mexicana
ENSFHEG00000006539	-	99	90.058	ENSPMEG00000006653	-	99	90.058	Poecilia_mexicana
ENSFHEG00000006539	-	100	97.179	ENSPREG00000020585	-	100	97.179	Poecilia_reticulata
ENSFHEG00000006539	-	97	93.182	ENSPREG00000015736	pcbp3	99	93.182	Poecilia_reticulata
ENSFHEG00000006539	-	100	96.865	ENSPNYG00000013205	-	100	96.865	Pundamilia_nyererei
ENSFHEG00000006539	-	97	95.177	ENSPNYG00000012326	pcbp3	95	95.177	Pundamilia_nyererei
ENSFHEG00000006539	-	100	96.573	ENSPNAG00000015104	pcbp3	100	96.573	Pygocentrus_nattereri
ENSFHEG00000006539	-	96	93.464	ENSPNAG00000008541	-	98	93.464	Pygocentrus_nattereri
ENSFHEG00000006539	-	99	94.654	ENSRNOG00000001245	Pcbp3	99	94.654	Rattus_norvegicus
ENSFHEG00000006539	-	99	85.455	ENSRBIG00000028177	-	91	85.455	Rhinopithecus_bieti
ENSFHEG00000006539	-	99	88.757	ENSSHAG00000007890	-	99	88.757	Sarcophilus_harrisii
ENSFHEG00000006539	-	97	87.425	ENSSFOG00015014706	pcbp3	95	87.425	Scleropages_formosus
ENSFHEG00000006539	-	97	84.295	ENSSFOG00015007118	-	95	84.295	Scleropages_formosus
ENSFHEG00000006539	-	97	95.498	ENSSFOG00015010205	pcbp3	95	95.498	Scleropages_formosus
ENSFHEG00000006539	-	97	95.455	ENSSMAG00000011929	pcbp3	97	95.455	Scophthalmus_maximus
ENSFHEG00000006539	-	100	96.865	ENSSMAG00000003135	-	100	96.865	Scophthalmus_maximus
ENSFHEG00000006539	-	97	87.988	ENSSDUG00000011608	pcbp3	99	87.988	Seriola_dumerili
ENSFHEG00000006539	-	97	92.628	ENSSDUG00000008502	-	95	92.628	Seriola_dumerili
ENSFHEG00000006539	-	97	87.988	ENSSLDG00000008518	pcbp3	99	87.988	Seriola_lalandi_dorsalis
ENSFHEG00000006539	-	97	96.463	ENSSLDG00000020161	-	95	96.463	Seriola_lalandi_dorsalis
ENSFHEG00000006539	-	97	76.420	ENSSPUG00000013214	-	92	83.415	Sphenodon_punctatus
ENSFHEG00000006539	-	88	95.563	ENSSPAG00000004190	-	100	95.563	Stegastes_partitus
ENSFHEG00000006539	-	97	77.410	ENSSPAG00000023341	-	95	77.410	Stegastes_partitus
ENSFHEG00000006539	-	98	87.580	ENSTGUG00000008158	-	99	87.580	Taeniopygia_guttata
ENSFHEG00000006539	-	99	85.423	ENSTGUG00000003316	-	99	85.423	Taeniopygia_guttata
ENSFHEG00000006539	-	99	92.744	ENSTRUG00000006280	-	99	92.744	Takifugu_rubripes
ENSFHEG00000006539	-	97	91.950	ENSTRUG00000013604	pcbp3	95	91.950	Takifugu_rubripes
ENSFHEG00000006539	-	99	82.271	ENSTTRG00000015075	-	99	82.271	Tursiops_truncatus
ENSFHEG00000006539	-	90	74.556	ENSXETG00000010491	pcbp2	74	74.556	Xenopus_tropicalis
ENSFHEG00000006539	-	98	87.425	ENSXETG00000011483	pcbp1	99	87.425	Xenopus_tropicalis
ENSFHEG00000006539	-	96	87.202	ENSXCOG00000020481	pcbp3	95	87.202	Xiphophorus_couchianus
ENSFHEG00000006539	-	97	96.785	ENSXMAG00000028711	-	95	96.785	Xiphophorus_maculatus
ENSFHEG00000006539	-	97	87.500	ENSXMAG00000008175	pcbp3	95	87.500	Xiphophorus_maculatus