EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000006625 (Gene tree)
Gene ID: 105917807
Gene Symbol: polr2j
Alias: rpb11|zgc:110005
Full Name: RNA polymerase II subunit J
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 2694 bases
Position: chrKN805796.1:257669-260362
Accession: 105917807
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000005651	RNA_pol_L_2	PF13656.6	4e-29	1	1
ENSFHEP00000005651	RNA_pol_L	PF01193.24	1.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000006817	-	1475	XM_012852715	ENSFHEP00000005651	117 (aa)	XP_012708169	UPI0000E3E8A7

Gene Model

Click here to download ENSFHEG00000006625's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000006625's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000006625	polr2j	89	32.710	ENSFHEG00000015410	polr1d	93	32.710

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000006625	polr2j	91	92.523	ENSG00000228049	POLR2J2	94	89.908	Homo_sapiens
ENSFHEG00000006625	polr2j	100	94.872	ENSG00000005075	POLR2J	100	94.872	Homo_sapiens
ENSFHEG00000006625	polr2j	100	100.000	ENSAPOG00000019538	polr2j	100	100.000	Acanthochromis_polyacanthus
ENSFHEG00000006625	polr2j	100	87.402	ENSAMEG00000015480	-	100	87.402	Ailuropoda_melanoleuca
ENSFHEG00000006625	polr2j	93	77.273	ENSACIG00000014549	POLR2J2	91	77.273	Amphilophus_citrinellus
ENSFHEG00000006625	polr2j	100	99.145	ENSAOCG00000006937	polr2j	100	99.145	Amphiprion_ocellaris
ENSFHEG00000006625	polr2j	100	100.000	ENSAPEG00000021761	polr2j	100	100.000	Amphiprion_percula
ENSFHEG00000006625	polr2j	100	100.000	ENSATEG00000013312	-	100	100.000	Anabas_testudineus
ENSFHEG00000006625	polr2j	100	100.000	ENSATEG00000009731	polr2j	100	100.000	Anabas_testudineus
ENSFHEG00000006625	polr2j	86	92.079	ENSAPLG00000003744	-	100	92.079	Anas_platyrhynchos
ENSFHEG00000006625	polr2j	100	87.179	ENSACAG00000000251	POLR2J	100	87.179	Anolis_carolinensis
ENSFHEG00000006625	polr2j	100	100.000	ENSACLG00000014564	polr2j	100	100.000	Astatotilapia_calliptera
ENSFHEG00000006625	polr2j	100	97.436	ENSAMXG00000007517	polr2j	100	97.436	Astyanax_mexicanus
ENSFHEG00000006625	polr2j	62	63.014	ENSBTAG00000048046	-	61	63.014	Bos_taurus
ENSFHEG00000006625	polr2j	94	68.182	WBGene00012187	rpb-11	89	68.182	Caenorhabditis_elegans
ENSFHEG00000006625	polr2j	100	94.872	ENSCJAG00000016203	-	100	94.872	Callithrix_jacchus
ENSFHEG00000006625	polr2j	100	94.872	ENSCAFG00000013683	-	100	94.872	Canis_familiaris
ENSFHEG00000006625	polr2j	85	93.939	ENSTSYG00000029243	-	85	93.939	Carlito_syrichta
ENSFHEG00000006625	polr2j	100	94.872	ENSCPOG00000001401	-	100	94.872	Cavia_porcellus
ENSFHEG00000006625	polr2j	100	73.504	ENSCATG00000016595	-	97	85.870	Cercocebus_atys
ENSFHEG00000006625	polr2j	100	94.872	ENSCLAG00000005238	-	100	94.872	Chinchilla_lanigera
ENSFHEG00000006625	polr2j	100	94.872	ENSCSAG00000018092	-	100	94.872	Chlorocebus_sabaeus
ENSFHEG00000006625	polr2j	100	82.051	ENSCING00000020531	-	100	82.051	Ciona_intestinalis
ENSFHEG00000006625	polr2j	100	80.342	ENSCSAVG00000006948	-	100	80.342	Ciona_savignyi
ENSFHEG00000006625	polr2j	100	94.872	ENSCGRG00001012814	Polr2j	100	94.872	Cricetulus_griseus_chok1gshd
ENSFHEG00000006625	polr2j	100	80.342	ENSCGRG00000008433	Polr2j	100	80.342	Cricetulus_griseus_crigri
ENSFHEG00000006625	polr2j	100	97.436	ENSCSEG00000020352	polr2j	100	97.436	Cynoglossus_semilaevis
ENSFHEG00000006625	polr2j	100	99.145	ENSCVAG00000014267	polr2j	100	99.145	Cyprinodon_variegatus
ENSFHEG00000006625	polr2j	100	96.581	ENSDARG00000035146	polr2j	100	96.581	Danio_rerio
ENSFHEG00000006625	polr2j	100	94.872	ENSDORG00000005934	Polr2j	100	94.872	Dipodomys_ordii
ENSFHEG00000006625	polr2j	98	79.130	FBgn0032634	Rpb11	98	79.130	Drosophila_melanogaster
ENSFHEG00000006625	polr2j	100	64.957	ENSEBUG00000016100	polr2j	100	64.957	Eptatretus_burgeri
ENSFHEG00000006625	polr2j	100	94.872	ENSEASG00005016864	-	100	94.872	Equus_asinus_asinus
ENSFHEG00000006625	polr2j	100	97.436	ENSELUG00000012822	polr2j	100	97.436	Esox_lucius
ENSFHEG00000006625	polr2j	100	94.872	ENSFCAG00000000377	-	100	94.872	Felis_catus
ENSFHEG00000006625	polr2j	100	94.872	ENSFALG00000009523	POLR2J	100	94.872	Ficedula_albicollis
ENSFHEG00000006625	polr2j	100	94.872	ENSFDAG00000010507	-	100	94.872	Fukomys_damarensis
ENSFHEG00000006625	polr2j	100	97.436	ENSGMOG00000018207	polr2j	100	97.436	Gadus_morhua
ENSFHEG00000006625	polr2j	100	94.872	ENSGALG00000030808	-	100	94.872	Gallus_gallus
ENSFHEG00000006625	polr2j	100	100.000	ENSGAFG00000019555	polr2j	100	100.000	Gambusia_affinis
ENSFHEG00000006625	polr2j	100	100.000	ENSGACG00000003310	polr2j	100	100.000	Gasterosteus_aculeatus
ENSFHEG00000006625	polr2j	97	84.956	ENSGAGG00000018304	-	96	84.956	Gopherus_agassizii
ENSFHEG00000006625	polr2j	85	89.000	ENSGGOG00000004519	-	80	89.000	Gorilla_gorilla
ENSFHEG00000006625	polr2j	100	100.000	ENSHBUG00000008467	polr2j	100	100.000	Haplochromis_burtoni
ENSFHEG00000006625	polr2j	100	94.872	ENSHGLG00000013598	POLR2J	100	94.872	Heterocephalus_glaber_female
ENSFHEG00000006625	polr2j	100	94.872	ENSHGLG00100011242	POLR2J	100	94.872	Heterocephalus_glaber_male
ENSFHEG00000006625	polr2j	100	97.436	ENSHCOG00000014827	polr2j	68	97.436	Hippocampus_comes
ENSFHEG00000006625	polr2j	100	97.436	ENSIPUG00000023960	polr2j	100	97.436	Ictalurus_punctatus
ENSFHEG00000006625	polr2j	100	94.872	ENSSTOG00000006377	POLR2J	100	94.872	Ictidomys_tridecemlineatus
ENSFHEG00000006625	polr2j	100	94.872	ENSJJAG00000013854	-	100	94.872	Jaculus_jaculus
ENSFHEG00000006625	polr2j	100	89.744	ENSJJAG00000018834	-	100	89.744	Jaculus_jaculus
ENSFHEG00000006625	polr2j	100	100.000	ENSKMAG00000014581	polr2j	79	100.000	Kryptolebias_marmoratus
ENSFHEG00000006625	polr2j	100	99.145	ENSLBEG00000005885	polr2j	100	99.145	Labrus_bergylta
ENSFHEG00000006625	polr2j	100	97.436	ENSLOCG00000001885	polr2j	89	97.436	Lepisosteus_oculatus
ENSFHEG00000006625	polr2j	100	94.872	ENSLAFG00000021507	-	100	94.872	Loxodonta_africana
ENSFHEG00000006625	polr2j	100	85.385	ENSMMUG00000012019	POLR2J	100	85.385	Macaca_mulatta
ENSFHEG00000006625	polr2j	100	99.145	ENSMAMG00000009374	polr2j	100	99.145	Mastacembelus_armatus
ENSFHEG00000006625	polr2j	100	100.000	ENSMZEG00005011932	polr2j	100	100.000	Maylandia_zebra
ENSFHEG00000006625	polr2j	100	94.872	ENSMGAG00000003534	POLR2J	100	94.872	Meleagris_gallopavo
ENSFHEG00000006625	polr2j	100	94.872	ENSMAUG00000013049	Polr2j	100	94.872	Mesocricetus_auratus
ENSFHEG00000006625	polr2j	80	89.362	ENSMICG00000026811	-	94	89.362	Microcebus_murinus
ENSFHEG00000006625	polr2j	100	94.872	ENSMOCG00000001294	Polr2j	100	94.872	Microtus_ochrogaster
ENSFHEG00000006625	polr2j	100	98.291	ENSMMOG00000013265	polr2j	100	98.291	Mola_mola
ENSFHEG00000006625	polr2j	100	86.719	ENSMODG00000013617	-	100	86.719	Monodelphis_domestica
ENSFHEG00000006625	polr2j	100	99.145	ENSMALG00000020749	polr2j	100	99.145	Monopterus_albus
ENSFHEG00000006625	polr2j	100	94.872	MGP_CAROLIEiJ_G0027851	Polr2j	100	94.872	Mus_caroli
ENSFHEG00000006625	polr2j	100	94.872	ENSMUSG00000039771	Polr2j	100	94.872	Mus_musculus
ENSFHEG00000006625	polr2j	100	94.872	MGP_PahariEiJ_G0024434	Polr2j	100	94.872	Mus_pahari
ENSFHEG00000006625	polr2j	100	94.872	MGP_SPRETEiJ_G0028853	Polr2j	100	94.872	Mus_spretus
ENSFHEG00000006625	polr2j	100	94.872	ENSMLUG00000010467	POLR2J	100	94.872	Myotis_lucifugus
ENSFHEG00000006625	polr2j	100	94.872	ENSNGAG00000023412	Polr2j	100	94.872	Nannospalax_galili
ENSFHEG00000006625	polr2j	66	97.403	ENSNBRG00000006580	polr2j	59	97.403	Neolamprologus_brichardi
ENSFHEG00000006625	polr2j	100	73.504	ENSODEG00000008559	-	100	73.504	Octodon_degus
ENSFHEG00000006625	polr2j	100	94.872	ENSODEG00000015648	-	100	94.872	Octodon_degus
ENSFHEG00000006625	polr2j	100	100.000	ENSONIG00000000259	polr2j	100	100.000	Oreochromis_niloticus
ENSFHEG00000006625	polr2j	100	92.308	ENSOANG00000020912	POLR2J	100	92.308	Ornithorhynchus_anatinus
ENSFHEG00000006625	polr2j	100	87.402	ENSOCUG00000023609	POLR2J	100	87.402	Oryctolagus_cuniculus
ENSFHEG00000006625	polr2j	100	100.000	ENSORLG00000029046	polr2j	83	100.000	Oryzias_latipes
ENSFHEG00000006625	polr2j	100	100.000	ENSORLG00020007625	polr2j	83	100.000	Oryzias_latipes_hni
ENSFHEG00000006625	polr2j	100	100.000	ENSORLG00015003457	polr2j	83	100.000	Oryzias_latipes_hsok
ENSFHEG00000006625	polr2j	100	99.145	ENSOMEG00000002097	polr2j	100	99.145	Oryzias_melastigma
ENSFHEG00000006625	polr2j	100	71.875	ENSOGAG00000008250	-	100	71.875	Otolemur_garnettii
ENSFHEG00000006625	polr2j	100	94.872	ENSOARG00000014204	-	98	94.872	Ovis_aries
ENSFHEG00000006625	polr2j	100	94.872	ENSPPRG00000012439	-	100	94.872	Panthera_pardus
ENSFHEG00000006625	polr2j	97	85.965	ENSPTIG00000018714	-	100	91.262	Panthera_tigris_altaica
ENSFHEG00000006625	polr2j	85	93.000	ENSPSIG00000010173	-	100	93.000	Pelodiscus_sinensis
ENSFHEG00000006625	polr2j	100	100.000	ENSPMGG00000021256	polr2j	100	100.000	Periophthalmus_magnuspinnatus
ENSFHEG00000006625	polr2j	100	94.872	ENSPEMG00000015733	Polr2j	100	94.872	Peromyscus_maniculatus_bairdii
ENSFHEG00000006625	polr2j	100	94.872	ENSPCIG00000009026	-	100	94.872	Phascolarctos_cinereus
ENSFHEG00000006625	polr2j	100	100.000	ENSPFOG00000012001	polr2j	99	100.000	Poecilia_formosa
ENSFHEG00000006625	polr2j	100	100.000	ENSPLAG00000014075	polr2j	100	100.000	Poecilia_latipinna
ENSFHEG00000006625	polr2j	100	100.000	ENSPMEG00000020585	polr2j	100	100.000	Poecilia_mexicana
ENSFHEG00000006625	polr2j	100	100.000	ENSPREG00000015255	polr2j	100	100.000	Poecilia_reticulata
ENSFHEG00000006625	polr2j	100	94.872	ENSPCOG00000024573	-	100	94.872	Propithecus_coquereli
ENSFHEG00000006625	polr2j	99	88.793	ENSPVAG00000017770	-	66	88.793	Pteropus_vampyrus
ENSFHEG00000006625	polr2j	100	100.000	ENSPNYG00000014832	polr2j	100	100.000	Pundamilia_nyererei
ENSFHEG00000006625	polr2j	100	94.872	ENSPNAG00000016595	polr2j	100	94.872	Pygocentrus_nattereri
ENSFHEG00000006625	polr2j	100	94.872	ENSRNOG00000001430	Polr2j	100	94.872	Rattus_norvegicus
ENSFHEG00000006625	polr2j	100	94.872	ENSSBOG00000025579	-	100	94.872	Saimiri_boliviensis_boliviensis
ENSFHEG00000006625	polr2j	59	98.551	ENSSHAG00000010443	-	81	98.551	Sarcophilus_harrisii
ENSFHEG00000006625	polr2j	93	95.413	ENSSFOG00015003371	polr2j	83	95.413	Scleropages_formosus
ENSFHEG00000006625	polr2j	100	100.000	ENSSMAG00000006729	polr2j	100	100.000	Scophthalmus_maximus
ENSFHEG00000006625	polr2j	100	100.000	ENSSDUG00000018490	polr2j	100	100.000	Seriola_dumerili
ENSFHEG00000006625	polr2j	100	100.000	ENSSLDG00000022354	polr2j	100	100.000	Seriola_lalandi_dorsalis
ENSFHEG00000006625	polr2j	100	94.872	ENSSPUG00000010802	-	100	94.872	Sphenodon_punctatus
ENSFHEG00000006625	polr2j	100	100.000	ENSSPAG00000021953	polr2j	100	100.000	Stegastes_partitus
ENSFHEG00000006625	polr2j	100	94.872	ENSSSCG00000007688	-	100	94.872	Sus_scrofa
ENSFHEG00000006625	polr2j	100	78.632	ENSSSCG00000003703	-	83	78.632	Sus_scrofa
ENSFHEG00000006625	polr2j	59	98.551	ENSTGUG00000004510	-	100	98.551	Taeniopygia_guttata
ENSFHEG00000006625	polr2j	85	93.000	ENSTGUG00000004501	-	100	93.000	Taeniopygia_guttata
ENSFHEG00000006625	polr2j	100	99.145	ENSTRUG00000020842	polr2j	100	99.145	Takifugu_rubripes
ENSFHEG00000006625	polr2j	100	98.291	ENSTNIG00000002994	polr2j	100	98.291	Tetraodon_nigroviridis
ENSFHEG00000006625	polr2j	91	79.439	ENSTBEG00000005797	-	70	79.439	Tupaia_belangeri
ENSFHEG00000006625	polr2j	100	94.872	ENSUAMG00000011310	-	100	94.872	Ursus_americanus
ENSFHEG00000006625	polr2j	100	94.872	ENSUMAG00000012594	-	100	94.872	Ursus_maritimus
ENSFHEG00000006625	polr2j	100	94.017	ENSXETG00000001108	polr2j	100	94.017	Xenopus_tropicalis
ENSFHEG00000006625	polr2j	100	100.000	ENSXMAG00000012422	polr2j	100	100.000	Xiphophorus_maculatus