EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000006764 (Gene tree)
Gene ID: 105920765
Gene Symbol: rbm42
Alias: mgc10433l|zgc:109907
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 3918 bases
Position: chrKN806137.1:182213-186130
Accession: 105920765
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000024893	RRM_1	PF00076.22	5.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000006597	-	2629	XM_012856398	ENSFHEP00000024893	299 (aa)	XP_012711852	-

Gene Model

Click here to download ENSFHEG00000006764's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000006764's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000006764	rbm42	91	80.000	ENSAPOG00000015109	rbm42	65	79.121	Acanthochromis_polyacanthus
ENSFHEG00000006764	rbm42	91	81.319	ENSACIG00000010771	rbm42	66	80.220	Amphilophus_citrinellus
ENSFHEG00000006764	rbm42	91	80.727	ENSAOCG00000008873	rbm42	65	79.487	Amphiprion_ocellaris
ENSFHEG00000006764	rbm42	91	80.727	ENSAPEG00000012051	rbm42	64	79.487	Amphiprion_percula
ENSFHEG00000006764	rbm42	87	79.231	ENSATEG00000000536	rbm42	65	76.923	Anabas_testudineus
ENSFHEG00000006764	rbm42	91	80.220	ENSACLG00000004988	rbm42	65	78.388	Astatotilapia_calliptera
ENSFHEG00000006764	rbm42	75	82.667	ENSAMXG00000016545	rbm42	57	82.667	Astyanax_mexicanus
ENSFHEG00000006764	rbm42	91	77.091	ENSCSEG00000010248	rbm42	68	76.812	Cynoglossus_semilaevis
ENSFHEG00000006764	rbm42	100	88.294	ENSCVAG00000015589	rbm42	73	88.294	Cyprinodon_variegatus
ENSFHEG00000006764	rbm42	78	78.298	ENSDARG00000039910	rbm42	54	80.717	Danio_rerio
ENSFHEG00000006764	rbm42	83	74.902	ENSELUG00000022403	rbm42	53	80.973	Esox_lucius
ENSFHEG00000006764	rbm42	75	81.416	ENSGMOG00000012660	rbm42	56	81.416	Gadus_morhua
ENSFHEG00000006764	rbm42	89	88.722	ENSGAFG00000009059	rbm42	86	86.940	Gambusia_affinis
ENSFHEG00000006764	rbm42	91	76.923	ENSGACG00000004170	rbm42	73	73.091	Gasterosteus_aculeatus
ENSFHEG00000006764	rbm42	91	79.853	ENSHBUG00000011141	rbm42	65	78.388	Haplochromis_burtoni
ENSFHEG00000006764	rbm42	89	76.119	ENSHCOG00000021214	rbm42	65	74.349	Hippocampus_comes
ENSFHEG00000006764	rbm42	83	76.707	ENSIPUG00000022365	rbm42	53	81.166	Ictalurus_punctatus
ENSFHEG00000006764	rbm42	78	80.258	ENSKMAG00000015287	rbm42	69	78.327	Kryptolebias_marmoratus
ENSFHEG00000006764	rbm42	91	77.656	ENSLBEG00000004578	-	73	77.903	Labrus_bergylta
ENSFHEG00000006764	rbm42	91	77.656	ENSLBEG00000017547	rbm42	65	77.903	Labrus_bergylta
ENSFHEG00000006764	rbm42	87	68.797	ENSLOCG00000003368	rbm42	52	76.126	Lepisosteus_oculatus
ENSFHEG00000006764	rbm42	91	79.487	ENSMAMG00000006708	rbm42	65	78.022	Mastacembelus_armatus
ENSFHEG00000006764	rbm42	91	80.220	ENSMZEG00005025234	rbm42	65	78.388	Maylandia_zebra
ENSFHEG00000006764	rbm42	91	79.412	ENSMALG00000015720	rbm42	72	78.388	Monopterus_albus
ENSFHEG00000006764	rbm42	91	81.319	ENSONIG00000008029	rbm42	65	79.853	Oreochromis_niloticus
ENSFHEG00000006764	rbm42	82	73.200	ENSORLG00020022507	rbm42	52	77.778	Oryzias_latipes_hni
ENSFHEG00000006764	rbm42	100	78.930	ENSORLG00015000659	rbm42	72	77.926	Oryzias_latipes_hsok
ENSFHEG00000006764	rbm42	85	79.921	ENSOMEG00000014332	rbm42	84	85.778	Oryzias_melastigma
ENSFHEG00000006764	rbm42	87	74.525	ENSPKIG00000015165	rbm42	54	80.357	Paramormyrops_kingsleyae
ENSFHEG00000006764	rbm42	91	64.664	ENSPMGG00000003569	rbm42	92	63.345	Periophthalmus_magnuspinnatus
ENSFHEG00000006764	rbm42	71	55.310	ENSPMAG00000008633	rbm42	60	56.780	Petromyzon_marinus
ENSFHEG00000006764	rbm42	89	89.474	ENSPFOG00000007701	rbm42	66	87.313	Poecilia_formosa
ENSFHEG00000006764	rbm42	89	89.474	ENSPLAG00000009405	rbm42	66	87.313	Poecilia_latipinna
ENSFHEG00000006764	rbm42	89	89.098	ENSPMEG00000010375	rbm42	66	87.313	Poecilia_mexicana
ENSFHEG00000006764	rbm42	89	89.850	ENSPREG00000018102	rbm42	70	87.687	Poecilia_reticulata
ENSFHEG00000006764	rbm42	91	79.853	ENSPNYG00000014460	rbm42	65	78.388	Pundamilia_nyererei
ENSFHEG00000006764	rbm42	80	77.406	ENSPNAG00000009961	rbm42	53	80.269	Pygocentrus_nattereri
ENSFHEG00000006764	rbm42	83	75.600	ENSSFOG00015019227	rbm42	54	78.571	Scleropages_formosus
ENSFHEG00000006764	rbm42	100	77.000	ENSSMAG00000011935	rbm42	72	75.667	Scophthalmus_maximus
ENSFHEG00000006764	rbm42	91	79.121	ENSSDUG00000004033	rbm42	72	78.261	Seriola_dumerili
ENSFHEG00000006764	rbm42	100	78.261	ENSSLDG00000009918	rbm42	78	77.592	Seriola_lalandi_dorsalis
ENSFHEG00000006764	rbm42	100	79.734	ENSSPAG00000019871	rbm42	65	79.487	Stegastes_partitus
ENSFHEG00000006764	rbm42	91	71.218	ENSTRUG00000024586	-	50	71.956	Takifugu_rubripes
ENSFHEG00000006764	rbm42	91	65.172	ENSTNIG00000011669	rbm42	63	64.583	Tetraodon_nigroviridis
ENSFHEG00000006764	rbm42	75	72.889	ENSXETG00000017599	rbm42	52	73.094	Xenopus_tropicalis
ENSFHEG00000006764	rbm42	89	89.474	ENSXMAG00000012827	rbm42	70	87.313	Xiphophorus_maculatus