EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSFHEG00000007215 (Gene tree)
Gene ID
105918322
Gene Symbol
pabpn1
Alias
fb19c03|wu:fb17e03|wu:fb18c06|wu:fb19c03|zgc:85979|zgc:92452
Full Name
poly(A) binding protein nuclear 1
Gene Type
protein_coding
Species
Fundulus_heteroclitus
Status
putative
Strand
Plus strand
Length
14046 bases
Position
chrKN805831.1:91082-105127
Accession
105918322
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSFHEP00000025167RRM_1PF00076.222.6e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSFHET00000005914-3499XM_012853383ENSFHEP00000025167231 (aa)XP_012708837A0A146NUQ0
Gene Model
Click here to download ENSFHEG00000007215's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000007215's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSFHEG00000007215pabpn16459.868ENSFHEG00000018295PABPN1L6558.101
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSFHEG00000007215pabpn19970.386ENSG00000258643BCL2L2-PABPN17067.811Homo_sapiens
ENSFHEG00000007215pabpn18680.097ENSG00000100836PABPN19475.595Homo_sapiens
ENSFHEG00000007215pabpn110095.259ENSAPOG00000016425pabpn110095.259Acanthochromis_polyacanthus
ENSFHEG00000007215pabpn18181.579ENSAMEG00000007048BCL2L2-PABPN110078.421Ailuropoda_melanoleuca
ENSFHEG00000007215pabpn19494.570ENSACIG00000021744pabpn19494.545Amphilophus_citrinellus
ENSFHEG00000007215pabpn110095.259ENSAOCG00000015805pabpn110095.259Amphiprion_ocellaris
ENSFHEG00000007215pabpn110095.259ENSAPEG00000009623pabpn110095.259Amphiprion_percula
ENSFHEG00000007215pabpn110095.690ENSATEG00000020531pabpn110095.690Anabas_testudineus
ENSFHEG00000007215pabpn18183.158ENSACAG00000006185-8170.833Anolis_carolinensis
ENSFHEG00000007215pabpn19966.667ENSANAG00000024513-8471.074Aotus_nancymaae
ENSFHEG00000007215pabpn19494.144ENSACLG00000016374pabpn17593.953Astatotilapia_calliptera
ENSFHEG00000007215pabpn110094.850ENSAMXG00000000452pabpn110094.850Astyanax_mexicanus
ENSFHEG00000007215pabpn18475.000ENSBTAG00000050594-7474.038Bos_taurus
ENSFHEG00000007215pabpn18481.313ENSBTAG00000006884PABPN18665.152Bos_taurus
ENSFHEG00000007215pabpn18180.729ENSBTAG00000053753-7177.604Bos_taurus
ENSFHEG00000007215pabpn16258.219WBGene00003904pabp-28455.233Caenorhabditis_elegans
ENSFHEG00000007215pabpn19973.820ENSCJAG00000007960-8471.674Callithrix_jacchus
ENSFHEG00000007215pabpn17177.381ENSCJAG00000004407-8473.810Callithrix_jacchus
ENSFHEG00000007215pabpn18680.097ENSCAFG00000011482PABPN18666.667Canis_familiaris
ENSFHEG00000007215pabpn18680.097ENSCAFG00020007298-8666.288Canis_lupus_dingo
ENSFHEG00000007215pabpn18680.097ENSCAFG00020006651-8666.288Canis_lupus_dingo
ENSFHEG00000007215pabpn18680.097ENSCHIG00000012184PABPN18666.288Capra_hircus
ENSFHEG00000007215pabpn19970.386ENSTSYG00000033996BCL2L2-PABPN19475.595Carlito_syrichta
ENSFHEG00000007215pabpn15979.856ENSCAPG00000009461-9182.812Cavia_aperea
ENSFHEG00000007215pabpn18679.612ENSCPOG00000025574PABPN16876.555Cavia_porcellus
ENSFHEG00000007215pabpn19973.820ENSCCAG00000033954BCL2L2-PABPN18471.674Cebus_capucinus
ENSFHEG00000007215pabpn19973.820ENSCATG00000038536BCL2L2-PABPN18471.674Cercocebus_atys
ENSFHEG00000007215pabpn18756.710ENSCLAG00000012423PABPN15675.333Chinchilla_lanigera
ENSFHEG00000007215pabpn18678.641ENSCSAG00000016036PABPN18665.152Chlorocebus_sabaeus
ENSFHEG00000007215pabpn18970.476ENSCHOG00000004798BCL2L2-PABPN19265.909Choloepus_hoffmanni
ENSFHEG00000007215pabpn17180.952ENSCPBG00000026060-9477.381Chrysemys_picta_bellii
ENSFHEG00000007215pabpn19060.952ENSCING00000012468-8961.905Ciona_intestinalis
ENSFHEG00000007215pabpn17662.147ENSCSAVG00000002001-9362.048Ciona_savignyi
ENSFHEG00000007215pabpn18569.192ENSCANG00000030980-8760.504Colobus_angolensis_palliatus
ENSFHEG00000007215pabpn19970.386ENSCANG00000009750BCL2L2-PABPN19475.595Colobus_angolensis_palliatus
ENSFHEG00000007215pabpn18679.612ENSCGRG00001019696Pabpn19475.000Cricetulus_griseus_chok1gshd
ENSFHEG00000007215pabpn16389.116ENSCGRG00000011102Pabpn19189.116Cricetulus_griseus_crigri
ENSFHEG00000007215pabpn110093.966ENSCSEG00000008774pabpn110093.966Cynoglossus_semilaevis
ENSFHEG00000007215pabpn110091.880ENSCVAG00000003152pabpn110094.872Cyprinodon_variegatus
ENSFHEG00000007215pabpn110093.966ENSDARG00000045373pabpn110093.966Danio_rerio
ENSFHEG00000007215pabpn18153.763ENSDARG00000087996pabpn1l8660.714Danio_rerio
ENSFHEG00000007215pabpn18680.097ENSDNOG00000023682PABPN18666.288Dasypus_novemcinctus
ENSFHEG00000007215pabpn15781.203ENSDORG00000023928-8580.328Dipodomys_ordii
ENSFHEG00000007215pabpn18679.126ENSDORG00000028966-8665.530Dipodomys_ordii
ENSFHEG00000007215pabpn19758.442FBgn0005648Pabp210055.844Drosophila_melanogaster
ENSFHEG00000007215pabpn19971.552ENSEBUG00000002322pabpn19971.552Eptatretus_burgeri
ENSFHEG00000007215pabpn18680.097ENSEASG00005011716PABPN18666.288Equus_asinus_asinus
ENSFHEG00000007215pabpn18579.412ENSECAG00000011652PABPN18169.421Equus_caballus
ENSFHEG00000007215pabpn18677.670ENSEEUG00000012973-7173.684Erinaceus_europaeus
ENSFHEG00000007215pabpn110091.561ENSELUG00000022654pabpn110091.561Esox_lucius
ENSFHEG00000007215pabpn18680.097ENSFCAG00000031922PABPN18666.288Felis_catus
ENSFHEG00000007215pabpn17179.167ENSFDAG00000018381BCL2L2-PABPN19479.167Fukomys_damarensis
ENSFHEG00000007215pabpn19590.950ENSGMOG00000003922pabpn17592.488Gadus_morhua
ENSFHEG00000007215pabpn18381.313ENSGALG00000052930-6179.621Gallus_gallus
ENSFHEG00000007215pabpn110096.154ENSGAFG00000017099pabpn110096.154Gambusia_affinis
ENSFHEG00000007215pabpn110088.664ENSGACG00000002167pabpn110088.664Gasterosteus_aculeatus
ENSFHEG00000007215pabpn19973.820ENSGGOG00000022683-8471.674Gorilla_gorilla
ENSFHEG00000007215pabpn19463.675ENSGGOG00000025919-9862.416Gorilla_gorilla
ENSFHEG00000007215pabpn18968.269ENSGGOG00000039675-9162.917Gorilla_gorilla
ENSFHEG00000007215pabpn110095.690ENSHBUG00000019523pabpn110095.690Haplochromis_burtoni
ENSFHEG00000007215pabpn18679.612ENSHGLG00000002927-9289.116Heterocephalus_glaber_female
ENSFHEG00000007215pabpn17160.843ENSHGLG00000009842-9360.843Heterocephalus_glaber_female
ENSFHEG00000007215pabpn18767.961ENSHGLG00000018588-7072.727Heterocephalus_glaber_female
ENSFHEG00000007215pabpn17167.456ENSHGLG00100018935-9469.412Heterocephalus_glaber_male
ENSFHEG00000007215pabpn18767.961ENSHGLG00100015565-8764.035Heterocephalus_glaber_male
ENSFHEG00000007215pabpn19469.820ENSHGLG00100006673-9289.116Heterocephalus_glaber_male
ENSFHEG00000007215pabpn110094.828ENSHCOG00000004655pabpn110094.828Hippocampus_comes
ENSFHEG00000007215pabpn110085.776ENSIPUG00000000180-9985.776Ictalurus_punctatus
ENSFHEG00000007215pabpn110093.534ENSIPUG00000008085PABPN110093.534Ictalurus_punctatus
ENSFHEG00000007215pabpn17179.167ENSSTOG00000029847BCL2L2-PABPN19475.595Ictidomys_tridecemlineatus
ENSFHEG00000007215pabpn17179.167ENSJJAG00000023507Gm205219475.595Jaculus_jaculus
ENSFHEG00000007215pabpn110095.708ENSKMAG00000018748pabpn110095.708Kryptolebias_marmoratus
ENSFHEG00000007215pabpn110095.690ENSLBEG00000027266pabpn110095.690Labrus_bergylta
ENSFHEG00000007215pabpn17682.022ENSLACG00000000646pabpn19175.355Latimeria_chalumnae
ENSFHEG00000007215pabpn19593.182ENSLOCG00000000796pabpn17792.925Lepisosteus_oculatus
ENSFHEG00000007215pabpn19065.094ENSLOCG00000004694pabpn1l9965.094Lepisosteus_oculatus
ENSFHEG00000007215pabpn16480.000ENSLAFG00000031227-9976.000Loxodonta_africana
ENSFHEG00000007215pabpn16171.329ENSMFAG00000031355-9968.310Macaca_fascicularis
ENSFHEG00000007215pabpn19970.386ENSMFAG00000032183BCL2L2-PABPN19475.595Macaca_fascicularis
ENSFHEG00000007215pabpn19970.386ENSMMUG00000014747BCL2L2-PABPN110075.510Macaca_mulatta
ENSFHEG00000007215pabpn18666.341ENSMMUG00000048382-6964.286Macaca_mulatta
ENSFHEG00000007215pabpn19973.820ENSMNEG00000045065BCL2L2-PABPN18471.674Macaca_nemestrina
ENSFHEG00000007215pabpn17966.845ENSMNEG00000035750-9968.310Macaca_nemestrina
ENSFHEG00000007215pabpn19970.386ENSMLEG00000043862BCL2L2-PABPN19475.595Mandrillus_leucophaeus
ENSFHEG00000007215pabpn17163.636ENSMLEG00000034623-9967.143Mandrillus_leucophaeus
ENSFHEG00000007215pabpn19994.323ENSMAMG00000007979pabpn17994.323Mastacembelus_armatus
ENSFHEG00000007215pabpn19596.364ENSMZEG00005011904pabpn17796.364Maylandia_zebra
ENSFHEG00000007215pabpn19970.386ENSMAUG00000007383Gm205218766.412Mesocricetus_auratus
ENSFHEG00000007215pabpn19974.249ENSMICG00000010002BCL2L2-PABPN18472.458Microcebus_murinus
ENSFHEG00000007215pabpn19969.957ENSMOCG00000018557Gm205219089.116Microtus_ochrogaster
ENSFHEG00000007215pabpn110096.121ENSMMOG00000005405pabpn110096.121Mola_mola
ENSFHEG00000007215pabpn18578.325ENSMODG00000004535-7969.008Monodelphis_domestica
ENSFHEG00000007215pabpn19994.760ENSMALG00000019612pabpn17796.364Monopterus_albus
ENSFHEG00000007215pabpn18679.126MGP_CAROLIEiJ_G0019277Pabpn18989.726Mus_caroli
ENSFHEG00000007215pabpn19969.957MGP_CAROLIEiJ_G0019276Gm205217067.382Mus_caroli
ENSFHEG00000007215pabpn18679.612ENSMUSG00000022194Pabpn18989.726Mus_musculus
ENSFHEG00000007215pabpn19970.386ENSMUSG00000092232Gm205217067.811Mus_musculus
ENSFHEG00000007215pabpn18679.612MGP_PahariEiJ_G0030295Pabpn110095.238Mus_pahari
ENSFHEG00000007215pabpn19970.386MGP_PahariEiJ_G0030294Gm205217067.811Mus_pahari
ENSFHEG00000007215pabpn18679.612MGP_SPRETEiJ_G0020166Pabpn18989.726Mus_spretus
ENSFHEG00000007215pabpn19970.386MGP_SPRETEiJ_G0020165Gm205217067.811Mus_spretus
ENSFHEG00000007215pabpn16679.618ENSMPUG00000006775-8782.192Mustela_putorius_furo
ENSFHEG00000007215pabpn18777.143ENSMLUG00000012452-6977.143Myotis_lucifugus
ENSFHEG00000007215pabpn18180.526ENSMLUG00000003800-10077.368Myotis_lucifugus
ENSFHEG00000007215pabpn18478.788ENSMLUG00000028677-8568.644Myotis_lucifugus
ENSFHEG00000007215pabpn19970.815ENSNGAG00000019529Gm205217068.240Nannospalax_galili
ENSFHEG00000007215pabpn19596.364ENSNBRG00000023955pabpn19494.545Neolamprologus_brichardi
ENSFHEG00000007215pabpn19970.386ENSNLEG00000015007-7477.033Nomascus_leucogenys
ENSFHEG00000007215pabpn18667.327ENSNLEG00000030598-7766.829Nomascus_leucogenys
ENSFHEG00000007215pabpn16458.108ENSNLEG00000035292-9958.108Nomascus_leucogenys
ENSFHEG00000007215pabpn18672.277ENSODEG00000003739-8862.257Octodon_degus
ENSFHEG00000007215pabpn17669.832ENSODEG00000011555-8966.071Octodon_degus
ENSFHEG00000007215pabpn19969.957ENSODEG00000002083BCL2L2-PABPN16876.555Octodon_degus
ENSFHEG00000007215pabpn19596.364ENSONIG00000008112pabpn17796.364Oreochromis_niloticus
ENSFHEG00000007215pabpn16381.633ENSOANG00000009218-10077.551Ornithorhynchus_anatinus
ENSFHEG00000007215pabpn18679.612ENSOCUG00000016174PABPN19566.160Oryctolagus_cuniculus
ENSFHEG00000007215pabpn19995.633ENSORLG00000027900pabpn19096.698Oryzias_latipes
ENSFHEG00000007215pabpn19995.633ENSORLG00020004681pabpn17895.633Oryzias_latipes_hni
ENSFHEG00000007215pabpn110096.121ENSORLG00015000018pabpn110096.121Oryzias_latipes_hsok
ENSFHEG00000007215pabpn19596.364ENSOMEG00000016618pabpn18296.347Oryzias_melastigma
ENSFHEG00000007215pabpn18680.097ENSOGAG00000008710PABPN18666.288Otolemur_garnettii
ENSFHEG00000007215pabpn19970.386ENSOARG00000019336BCL2L2-PABPN16467.811Ovis_aries
ENSFHEG00000007215pabpn17165.663ENSPPAG00000039421-9363.253Pan_paniscus
ENSFHEG00000007215pabpn19970.386ENSPPAG00000028984BCL2L2-PABPN18782.192Pan_paniscus
ENSFHEG00000007215pabpn18680.097ENSPPRG00000010567PABPN18666.288Panthera_pardus
ENSFHEG00000007215pabpn17179.167ENSPTIG00000001063BCL2L2-PABPN19475.595Panthera_tigris_altaica
ENSFHEG00000007215pabpn19973.820ENSPTRG00000006167BCL2L28471.674Pan_troglodytes
ENSFHEG00000007215pabpn110061.966ENSPTRG00000047273-9357.937Pan_troglodytes
ENSFHEG00000007215pabpn19973.820ENSPANG00000021100BCL2L2-PABPN18471.674Papio_anubis
ENSFHEG00000007215pabpn18467.677ENSPANG00000023326-9969.014Papio_anubis
ENSFHEG00000007215pabpn18457.561ENSPKIG00000008340pabpn1l9261.856Paramormyrops_kingsleyae
ENSFHEG00000007215pabpn19991.703ENSPKIG00000008144-7891.703Paramormyrops_kingsleyae
ENSFHEG00000007215pabpn110089.700ENSPKIG00000018052pabpn110091.416Paramormyrops_kingsleyae
ENSFHEG00000007215pabpn19595.909ENSPMGG00000022027pabpn18195.909Periophthalmus_magnuspinnatus
ENSFHEG00000007215pabpn19970.386ENSPEMG00000008332Gm205218989.116Peromyscus_maniculatus_bairdii
ENSFHEG00000007215pabpn17974.194ENSPMAG00000006212pabpn19968.313Petromyzon_marinus
ENSFHEG00000007215pabpn18679.126ENSPCIG00000027751-8665.909Phascolarctos_cinereus
ENSFHEG00000007215pabpn110095.726ENSPFOG00000010351pabpn19995.726Poecilia_formosa
ENSFHEG00000007215pabpn19996.104ENSPLAG00000022696pabpn17897.297Poecilia_latipinna
ENSFHEG00000007215pabpn110095.726ENSPMEG00000020856pabpn110095.726Poecilia_mexicana
ENSFHEG00000007215pabpn110096.154ENSPREG00000011278pabpn110096.154Poecilia_reticulata
ENSFHEG00000007215pabpn18180.513ENSPPYG00000005663PABPN18669.421Pongo_abelii
ENSFHEG00000007215pabpn17968.229ENSPCAG00000005902PABPN18258.607Procavia_capensis
ENSFHEG00000007215pabpn19974.249ENSPCOG00000028047BCL2L2-PABPN18472.458Propithecus_coquereli
ENSFHEG00000007215pabpn18778.469ENSPVAG00000005270PABPN18666.160Pteropus_vampyrus
ENSFHEG00000007215pabpn110095.690ENSPNYG00000013182pabpn110095.690Pundamilia_nyererei
ENSFHEG00000007215pabpn110094.828ENSPNAG00000023526pabpn110094.828Pygocentrus_nattereri
ENSFHEG00000007215pabpn18860.194ENSPNAG00000021666pabpn1l8669.540Pygocentrus_nattereri
ENSFHEG00000007215pabpn18679.612ENSRNOG00000042195Pabpn18566.412Rattus_norvegicus
ENSFHEG00000007215pabpn18770.335ENSRBIG00000042811-9565.639Rhinopithecus_bieti
ENSFHEG00000007215pabpn18969.811ENSRBIG00000039547-8262.054Rhinopithecus_bieti
ENSFHEG00000007215pabpn19470.270ENSRBIG00000040762BCL2L2-PABPN16571.905Rhinopithecus_bieti
ENSFHEG00000007215pabpn19464.732ENSRROG00000040409-8262.500Rhinopithecus_roxellana
ENSFHEG00000007215pabpn19470.270ENSRROG00000045535BCL2L2-PABPN19475.595Rhinopithecus_roxellana
ENSFHEG00000007215pabpn18765.877ENSRROG00000036409-7062.882Rhinopithecus_roxellana
ENSFHEG00000007215pabpn19966.667ENSSBOG00000026930BCL2L2-PABPN18782.192Saimiri_boliviensis_boliviensis
ENSFHEG00000007215pabpn19960.084ENSSHAG00000007707-9957.983Sarcophilus_harrisii
ENSFHEG00000007215pabpn18180.526ENSSHAG00000014841-8777.895Sarcophilus_harrisii
ENSFHEG00000007215pabpn110093.534ENSSFOG00015014718pabpn110093.534Scleropages_formosus
ENSFHEG00000007215pabpn18362.304ENSSFOG00015015833pabpn1l7868.235Scleropages_formosus
ENSFHEG00000007215pabpn110086.266ENSSFOG00015012565pabpn110086.266Scleropages_formosus
ENSFHEG00000007215pabpn110095.259ENSSMAG00000020157pabpn110095.259Scophthalmus_maximus
ENSFHEG00000007215pabpn19995.197ENSSDUG00000020582pabpn17796.364Seriola_dumerili
ENSFHEG00000007215pabpn110095.690ENSSLDG00000007118pabpn110095.690Seriola_lalandi_dorsalis
ENSFHEG00000007215pabpn17181.548ENSSPUG00000018308-9477.381Sphenodon_punctatus
ENSFHEG00000007215pabpn110094.850ENSSPAG00000021658pabpn110094.850Stegastes_partitus
ENSFHEG00000007215pabpn19261.395ENSSSCG00000034805-7957.416Sus_scrofa
ENSFHEG00000007215pabpn19970.386ENSSSCG00000002023PABPN18666.288Sus_scrofa
ENSFHEG00000007215pabpn110093.966ENSTRUG00000023664pabpn110093.966Takifugu_rubripes
ENSFHEG00000007215pabpn19289.767ENSTNIG00000005369pabpn19094.330Tetraodon_nigroviridis
ENSFHEG00000007215pabpn18680.097ENSUAMG00000024460PABPN16877.033Ursus_americanus
ENSFHEG00000007215pabpn19970.386ENSUMAG00000014288BCL2L2-PABPN17067.811Ursus_maritimus
ENSFHEG00000007215pabpn19970.386ENSVVUG00000019912BCL2L2-PABPN17677.320Vulpes_vulpes
ENSFHEG00000007215pabpn18479.487ENSXETG00000014597pabpn17376.389Xenopus_tropicalis
ENSFHEG00000007215pabpn17380.233ENSXCOG00000005158pabpn18994.040Xiphophorus_couchianus
ENSFHEG00000007215pabpn110095.726ENSXMAG00000006196pabpn110095.726Xiphophorus_maculatus

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