EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000007278 (Gene tree)
Gene ID: 105917156
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein C-like
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 17573 bases
Position: chrKN805751.1:370673-388245
Accession: 105917156
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000006251	RRM_1	PF00076.22	5.4e-13	1	1
ENSFHEP00000025212	RRM_1	PF00076.22	5.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000005808	-	1654	XM_012851873	ENSFHEP00000025212	337 (aa)	XP_012707327	UPI000644E7F8
ENSFHET00000005817	-	1618	XM_012851874	ENSFHEP00000006251	325 (aa)	XP_012707328	-

Gene Model

Click here to download ENSFHEG00000007278's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000007278's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000007278	-	79	45.349	ENSFHEG00000018618	raly	84	45.417
ENSFHEG00000007278	-	90	70.100	ENSFHEG00000003605	-	84	71.795

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000007278	-	69	53.478	ENSG00000184672	RALYL	93	77.215	Homo_sapiens
ENSFHEG00000007278	-	93	73.616	ENSAPOG00000006963	hnrnpc	83	80.074	Acanthochromis_polyacanthus
ENSFHEG00000007278	-	100	81.098	ENSACIG00000016568	-	100	82.317	Amphilophus_citrinellus
ENSFHEG00000007278	-	94	70.096	ENSACIG00000000270	-	83	82.979	Amphilophus_citrinellus
ENSFHEG00000007278	-	99	78.328	ENSAOCG00000021616	-	97	79.205	Amphiprion_ocellaris
ENSFHEG00000007278	-	93	73.941	ENSAOCG00000003896	-	83	80.443	Amphiprion_ocellaris
ENSFHEG00000007278	-	93	73.941	ENSAPEG00000001489	-	83	80.443	Amphiprion_percula
ENSFHEG00000007278	-	82	85.926	ENSAPEG00000019962	-	82	86.667	Amphiprion_percula
ENSFHEG00000007278	-	82	86.347	ENSATEG00000018006	-	80	88.412	Anabas_testudineus
ENSFHEG00000007278	-	94	71.521	ENSATEG00000011734	-	85	79.336	Anabas_testudineus
ENSFHEG00000007278	-	69	51.667	ENSAPLG00000015574	RALYL	76	51.883	Anas_platyrhynchos
ENSFHEG00000007278	-	69	51.667	ENSACAG00000028464	RALYL	75	52.301	Anolis_carolinensis
ENSFHEG00000007278	-	69	53.509	ENSANAG00000023383	RALYL	74	53.540	Aotus_nancymaae
ENSFHEG00000007278	-	98	66.563	ENSACLG00000000995	-	83	78.151	Astatotilapia_calliptera
ENSFHEG00000007278	-	98	66.254	ENSACLG00000013636	-	85	76.471	Astatotilapia_calliptera
ENSFHEG00000007278	-	82	85.448	ENSACLG00000005707	-	86	85.448	Astatotilapia_calliptera
ENSFHEG00000007278	-	84	70.652	ENSAMXG00000034915	zgc:55733	90	69.065	Astyanax_mexicanus
ENSFHEG00000007278	-	69	72.889	ENSAMXG00000042946	hnrnpc	97	74.396	Astyanax_mexicanus
ENSFHEG00000007278	-	69	53.509	ENSCJAG00000000402	RALYL	75	52.609	Callithrix_jacchus
ENSFHEG00000007278	-	69	51.899	ENSCPOG00000012314	RALYL	74	51.883	Cavia_porcellus
ENSFHEG00000007278	-	69	53.509	ENSCCAG00000025003	RALYL	81	74.699	Cebus_capucinus
ENSFHEG00000007278	-	69	53.478	ENSCATG00000042145	RALYL	74	53.540	Cercocebus_atys
ENSFHEG00000007278	-	69	51.464	ENSCLAG00000005228	RALYL	75	51.452	Chinchilla_lanigera
ENSFHEG00000007278	-	69	50.417	ENSCHOG00000013228	RALYL	75	49.791	Choloepus_hoffmanni
ENSFHEG00000007278	-	69	53.478	ENSCANG00000039144	RALYL	74	53.540	Colobus_angolensis_palliatus
ENSFHEG00000007278	-	69	52.083	ENSCGRG00001009241	Ralyl	75	51.883	Cricetulus_griseus_chok1gshd
ENSFHEG00000007278	-	72	71.130	ENSCSEG00000019769	-	75	71.967	Cynoglossus_semilaevis
ENSFHEG00000007278	-	82	81.041	ENSCSEG00000021349	-	79	81.550	Cynoglossus_semilaevis
ENSFHEG00000007278	-	99	59.574	ENSCVAG00000002797	-	86	62.271	Cyprinodon_variegatus
ENSFHEG00000007278	-	99	88.000	ENSCVAG00000016981	-	97	90.881	Cyprinodon_variegatus
ENSFHEG00000007278	-	92	69.900	ENSDARG00000103845	zgc:55733	91	72.119	Danio_rerio
ENSFHEG00000007278	-	77	76.892	ENSDARG00000053810	hnrnpc	80	76.296	Danio_rerio
ENSFHEG00000007278	-	69	52.083	ENSDORG00000003721	Ralyl	75	52.720	Dipodomys_ordii
ENSFHEG00000007278	-	54	52.660	ENSETEG00000014028	RALYL	82	55.114	Echinops_telfairi
ENSFHEG00000007278	-	69	45.887	ENSEBUG00000006049	RALYL	74	45.374	Eptatretus_burgeri
ENSFHEG00000007278	-	87	40.000	ENSEBUG00000012363	hnrnpc	67	43.478	Eptatretus_burgeri
ENSFHEG00000007278	-	69	52.500	ENSEEUG00000007202	RALYL	76	52.743	Erinaceus_europaeus
ENSFHEG00000007278	-	82	74.170	ENSELUG00000004132	-	88	74.729	Esox_lucius
ENSFHEG00000007278	-	78	73.978	ENSELUG00000007714	-	90	69.643	Esox_lucius
ENSFHEG00000007278	-	69	53.913	ENSFALG00000008647	RALYL	97	53.017	Ficedula_albicollis
ENSFHEG00000007278	-	69	53.947	ENSGALG00000036938	RALYL	75	51.883	Gallus_gallus
ENSFHEG00000007278	-	90	69.435	ENSGAFG00000020486	-	82	75.847	Gambusia_affinis
ENSFHEG00000007278	-	100	85.846	ENSGAFG00000020992	-	100	85.846	Gambusia_affinis
ENSFHEG00000007278	-	71	68.201	ENSGACG00000018932	-	87	68.201	Gasterosteus_aculeatus
ENSFHEG00000007278	-	83	83.824	ENSGACG00000017772	-	97	84.586	Gasterosteus_aculeatus
ENSFHEG00000007278	-	69	53.478	ENSGGOG00000000841	RALYL	74	53.540	Gorilla_gorilla
ENSFHEG00000007278	-	98	66.873	ENSHBUG00000018342	-	99	62.535	Haplochromis_burtoni
ENSFHEG00000007278	-	100	80.909	ENSHBUG00000010527	-	97	80.909	Haplochromis_burtoni
ENSFHEG00000007278	-	69	51.046	ENSHGLG00000004866	RALYL	75	51.899	Heterocephalus_glaber_female
ENSFHEG00000007278	-	69	51.046	ENSHGLG00100017480	RALYL	75	51.899	Heterocephalus_glaber_male
ENSFHEG00000007278	-	81	78.700	ENSHCOG00000012333	hnrnpc	87	78.723	Hippocampus_comes
ENSFHEG00000007278	-	99	68.210	ENSIPUG00000011271	hnrnpc	99	77.551	Ictalurus_punctatus
ENSFHEG00000007278	-	82	73.606	ENSIPUG00000008666	zgc:55733	95	75.107	Ictalurus_punctatus
ENSFHEG00000007278	-	69	51.667	ENSSTOG00000012583	RALYL	76	52.301	Ictidomys_tridecemlineatus
ENSFHEG00000007278	-	90	71.959	ENSKMAG00000011170	-	83	77.860	Kryptolebias_marmoratus
ENSFHEG00000007278	-	99	80.061	ENSKMAG00000018265	-	80	85.926	Kryptolebias_marmoratus
ENSFHEG00000007278	-	90	69.697	ENSLBEG00000006979	-	85	72.348	Labrus_bergylta
ENSFHEG00000007278	-	100	77.744	ENSLBEG00000006193	-	97	80.793	Labrus_bergylta
ENSFHEG00000007278	-	99	67.062	ENSLBEG00000024418	-	86	71.841	Labrus_bergylta
ENSFHEG00000007278	-	84	68.231	ENSLOCG00000002560	hnrnpc	89	68.148	Lepisosteus_oculatus
ENSFHEG00000007278	-	69	53.478	ENSMNEG00000033288	RALYL	74	53.540	Macaca_nemestrina
ENSFHEG00000007278	-	69	53.478	ENSMLEG00000038284	RALYL	74	53.540	Mandrillus_leucophaeus
ENSFHEG00000007278	-	94	72.903	ENSMAMG00000012236	-	82	80.812	Mastacembelus_armatus
ENSFHEG00000007278	-	100	77.607	ENSMAMG00000008033	-	86	86.641	Mastacembelus_armatus
ENSFHEG00000007278	-	98	66.563	ENSMZEG00005020460	-	88	72.628	Maylandia_zebra
ENSFHEG00000007278	-	100	80.909	ENSMZEG00005024249	-	97	80.909	Maylandia_zebra
ENSFHEG00000007278	-	69	52.083	ENSMAUG00000015149	Ralyl	75	51.883	Mesocricetus_auratus
ENSFHEG00000007278	-	69	52.838	ENSMICG00000005558	RALYL	82	76.543	Microcebus_murinus
ENSFHEG00000007278	-	69	52.083	ENSMOCG00000017371	Ralyl	75	51.883	Microtus_ochrogaster
ENSFHEG00000007278	-	94	79.612	ENSMMOG00000019520	-	83	87.013	Mola_mola
ENSFHEG00000007278	-	88	75.347	ENSMMOG00000021465	-	89	78.309	Mola_mola
ENSFHEG00000007278	-	98	61.491	ENSMALG00000007520	-	85	72.963	Monopterus_albus
ENSFHEG00000007278	-	82	80.741	ENSMALG00000014623	-	81	81.481	Monopterus_albus
ENSFHEG00000007278	-	69	52.083	ENSMUSG00000039717	Ralyl	93	75.949	Mus_musculus
ENSFHEG00000007278	-	69	52.500	ENSMPUG00000010724	RALYL	75	51.883	Mustela_putorius_furo
ENSFHEG00000007278	-	69	52.083	ENSNGAG00000013375	Ralyl	75	51.883	Nannospalax_galili
ENSFHEG00000007278	-	100	79.758	ENSNBRG00000015676	-	97	81.269	Neolamprologus_brichardi
ENSFHEG00000007278	-	94	69.256	ENSNBRG00000004912	-	93	76.446	Neolamprologus_brichardi
ENSFHEG00000007278	-	69	53.478	ENSNLEG00000002702	RALYL	71	53.540	Nomascus_leucogenys
ENSFHEG00000007278	-	59	46.860	ENSOPRG00000013650	-	98	45.894	Ochotona_princeps
ENSFHEG00000007278	-	69	52.083	ENSODEG00000001012	RALYL	75	51.037	Octodon_degus
ENSFHEG00000007278	-	100	81.212	ENSONIG00000018350	-	97	81.212	Oreochromis_niloticus
ENSFHEG00000007278	-	93	69.381	ENSONIG00000007859	-	91	76.173	Oreochromis_niloticus
ENSFHEG00000007278	-	99	80.967	ENSORLG00000003144	-	79	88.519	Oryzias_latipes
ENSFHEG00000007278	-	98	63.804	ENSORLG00000009999	-	83	69.231	Oryzias_latipes
ENSFHEG00000007278	-	98	63.497	ENSORLG00020018228	hnrnpc	83	68.864	Oryzias_latipes_hni
ENSFHEG00000007278	-	98	63.804	ENSORLG00015019755	-	83	69.231	Oryzias_latipes_hsok
ENSFHEG00000007278	-	99	81.682	ENSORLG00015009460	-	79	88.519	Oryzias_latipes_hsok
ENSFHEG00000007278	-	99	81.957	ENSOMEG00000022665	-	80	87.778	Oryzias_melastigma
ENSFHEG00000007278	-	93	63.430	ENSOMEG00000020488	-	83	70.330	Oryzias_melastigma
ENSFHEG00000007278	-	69	53.478	ENSPPAG00000038705	RALYL	74	53.540	Pan_paniscus
ENSFHEG00000007278	-	69	55.263	ENSPPRG00000018612	RALYL	74	54.148	Panthera_pardus
ENSFHEG00000007278	-	69	55.263	ENSPTIG00000020331	RALYL	74	54.148	Panthera_tigris_altaica
ENSFHEG00000007278	-	69	53.478	ENSPTRG00000020381	RALYL	74	53.540	Pan_troglodytes
ENSFHEG00000007278	-	69	53.478	ENSPANG00000029305	RALYL	74	53.540	Papio_anubis
ENSFHEG00000007278	-	82	72.563	ENSPKIG00000008592	-	82	74.820	Paramormyrops_kingsleyae
ENSFHEG00000007278	-	74	77.642	ENSPKIG00000022837	-	73	80.162	Paramormyrops_kingsleyae
ENSFHEG00000007278	-	69	51.667	ENSPSIG00000011135	RALYL	75	51.883	Pelodiscus_sinensis
ENSFHEG00000007278	-	72	83.051	ENSPMGG00000013144	-	83	82.203	Periophthalmus_magnuspinnatus
ENSFHEG00000007278	-	98	58.934	ENSPMGG00000017774	-	94	63.563	Periophthalmus_magnuspinnatus
ENSFHEG00000007278	-	69	52.083	ENSPEMG00000016447	Ralyl	75	51.883	Peromyscus_maniculatus_bairdii
ENSFHEG00000007278	-	69	51.852	ENSPMAG00000002407	RALYL	97	50.617	Petromyzon_marinus
ENSFHEG00000007278	-	99	86.604	ENSPFOG00000002643	-	97	86.769	Poecilia_formosa
ENSFHEG00000007278	-	90	70.333	ENSPFOG00000001583	-	83	75.458	Poecilia_formosa
ENSFHEG00000007278	-	90	68.896	ENSPLAG00000015305	-	83	74.725	Poecilia_latipinna
ENSFHEG00000007278	-	99	87.654	ENSPLAG00000000061	-	97	88.415	Poecilia_latipinna
ENSFHEG00000007278	-	99	85.981	ENSPMEG00000016524	-	97	86.154	Poecilia_mexicana
ENSFHEG00000007278	-	90	72.093	ENSPMEG00000004802	-	83	75.458	Poecilia_mexicana
ENSFHEG00000007278	-	84	69.534	ENSPREG00000007928	-	83	72.894	Poecilia_reticulata
ENSFHEG00000007278	-	81	91.288	ENSPREG00000001852	-	85	91.418	Poecilia_reticulata
ENSFHEG00000007278	-	69	44.444	ENSPPYG00000018710	-	50	60.800	Pongo_abelii
ENSFHEG00000007278	-	87	44.516	ENSPVAG00000010821	RALYL	90	44.333	Pteropus_vampyrus
ENSFHEG00000007278	-	99	69.419	ENSPNYG00000003747	-	86	84.559	Pundamilia_nyererei
ENSFHEG00000007278	-	90	71.096	ENSPNYG00000020293	-	87	76.838	Pundamilia_nyererei
ENSFHEG00000007278	-	94	63.666	ENSPNAG00000019200	zgc:55733	76	72.653	Pygocentrus_nattereri
ENSFHEG00000007278	-	77	75.794	ENSPNAG00000015686	hnrnpc	86	77.778	Pygocentrus_nattereri
ENSFHEG00000007278	-	69	53.478	ENSRROG00000023925	RALYL	90	74.157	Rhinopithecus_roxellana
ENSFHEG00000007278	-	82	71.014	ENSSFOG00015012015	-	82	77.826	Scleropages_formosus
ENSFHEG00000007278	-	82	73.646	ENSSFOG00015012924	-	97	80.769	Scleropages_formosus
ENSFHEG00000007278	-	99	66.769	ENSSMAG00000011147	-	81	85.232	Scophthalmus_maximus
ENSFHEG00000007278	-	92	71.382	ENSSMAG00000013592	-	81	78.277	Scophthalmus_maximus
ENSFHEG00000007278	-	90	74.582	ENSSDUG00000001723	-	83	80.074	Seriola_dumerili
ENSFHEG00000007278	-	100	80.793	ENSSDUG00000006730	-	81	86.667	Seriola_dumerili
ENSFHEG00000007278	-	88	75.601	ENSSLDG00000007454	-	83	80.443	Seriola_lalandi_dorsalis
ENSFHEG00000007278	-	82	82.222	ENSSLDG00000007474	-	88	84.815	Seriola_lalandi_dorsalis
ENSFHEG00000007278	-	100	81.288	ENSSPAG00000013996	-	97	83.742	Stegastes_partitus
ENSFHEG00000007278	-	93	74.675	ENSSPAG00000023204	-	83	81.181	Stegastes_partitus
ENSFHEG00000007278	-	72	50.602	ENSTGUG00000011689	RALYL	80	50.806	Taeniopygia_guttata
ENSFHEG00000007278	-	94	72.964	ENSTRUG00000020158	-	84	77.037	Takifugu_rubripes
ENSFHEG00000007278	-	82	74.453	ENSTNIG00000007427	-	84	74.453	Tetraodon_nigroviridis
ENSFHEG00000007278	-	82	75.373	ENSTNIG00000000334	-	94	75.636	Tetraodon_nigroviridis
ENSFHEG00000007278	-	50	77.215	ENSTBEG00000005551	RALYL	87	49.115	Tupaia_belangeri
ENSFHEG00000007278	-	69	51.515	ENSTTRG00000015762	RALYL	74	51.739	Tursiops_truncatus
ENSFHEG00000007278	-	69	50.655	ENSVPAG00000008501	RALYL	74	50.661	Vicugna_pacos
ENSFHEG00000007278	-	52	85.311	ENSXCOG00000019434	-	93	77.021	Xiphophorus_couchianus
ENSFHEG00000007278	-	89	66.102	ENSXCOG00000006552	-	82	68.148	Xiphophorus_couchianus
ENSFHEG00000007278	-	90	71.096	ENSXMAG00000009333	-	83	72.894	Xiphophorus_maculatus
ENSFHEG00000007278	-	81	91.288	ENSXMAG00000022849	-	83	91.418	Xiphophorus_maculatus