EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000007398 (Gene tree)
Gene ID: -
Gene Symbol: lig4
Alias: zgc:165595
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 9881 bases
Position: chrKN805692.1:132634-142514
Accession: 105916165
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000006360	RNA_ligase	PF09414.10	3.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000005638	-	4788	XM_012850521	ENSFHEP00000006360	1006 (aa)	XP_012705975	-

Gene Model

Click here to download ENSFHEG00000007398's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000007398's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000007398	lig4	89	65.449	ENSG00000174405	LIG4	100	65.877	Homo_sapiens
ENSFHEG00000007398	lig4	91	88.145	ENSAPOG00000000866	lig4	100	88.145	Acanthochromis_polyacanthus
ENSFHEG00000007398	lig4	90	64.035	ENSAMEG00000019685	LIG4	99	64.035	Ailuropoda_melanoleuca
ENSFHEG00000007398	lig4	90	90.110	ENSACIG00000018309	lig4	99	90.110	Amphilophus_citrinellus
ENSFHEG00000007398	lig4	91	87.925	ENSAOCG00000011768	lig4	100	87.925	Amphiprion_ocellaris
ENSFHEG00000007398	lig4	91	88.145	ENSAPEG00000017815	lig4	100	88.145	Amphiprion_percula
ENSFHEG00000007398	lig4	91	87.816	ENSATEG00000005583	lig4	100	87.816	Anabas_testudineus
ENSFHEG00000007398	lig4	87	67.503	ENSAPLG00000001673	LIG4	99	67.540	Anas_platyrhynchos
ENSFHEG00000007398	lig4	90	66.851	ENSACAG00000014566	LIG4	99	66.851	Anolis_carolinensis
ENSFHEG00000007398	lig4	89	65.006	ENSANAG00000012446	LIG4	99	65.006	Aotus_nancymaae
ENSFHEG00000007398	lig4	90	88.242	ENSACLG00000027051	lig4	100	88.145	Astatotilapia_calliptera
ENSFHEG00000007398	lig4	91	79.654	ENSAMXG00000008192	lig4	96	79.654	Astyanax_mexicanus
ENSFHEG00000007398	lig4	89	65.083	ENSBTAG00000015868	LIG4	99	64.895	Bos_taurus
ENSFHEG00000007398	lig4	89	64.784	ENSCJAG00000014689	LIG4	99	64.784	Callithrix_jacchus
ENSFHEG00000007398	lig4	89	64.895	ENSCAFG00000006031	LIG4	99	64.563	Canis_familiaris
ENSFHEG00000007398	lig4	89	64.895	ENSCAFG00020021230	LIG4	99	64.563	Canis_lupus_dingo
ENSFHEG00000007398	lig4	89	64.972	ENSCHIG00000001019	LIG4	99	64.784	Capra_hircus
ENSFHEG00000007398	lig4	89	64.895	ENSCAPG00000006284	LIG4	99	64.784	Cavia_aperea
ENSFHEG00000007398	lig4	89	64.784	ENSCPOG00000014266	LIG4	99	64.673	Cavia_porcellus
ENSFHEG00000007398	lig4	89	65.227	ENSCCAG00000019971	LIG4	99	65.116	Cebus_capucinus
ENSFHEG00000007398	lig4	90	65.055	ENSCATG00000021075	LIG4	99	65.055	Cercocebus_atys
ENSFHEG00000007398	lig4	89	65.449	ENSCLAG00000003376	LIG4	99	65.449	Chinchilla_lanigera
ENSFHEG00000007398	lig4	89	65.116	ENSCSAG00000000211	LIG4	99	65.116	Chlorocebus_sabaeus
ENSFHEG00000007398	lig4	89	68.701	ENSCPBG00000023291	LIG4	100	68.162	Chrysemys_picta_bellii
ENSFHEG00000007398	lig4	62	47.551	ENSCING00000009536	-	96	47.551	Ciona_intestinalis
ENSFHEG00000007398	lig4	75	44.605	ENSCSAVG00000010336	-	98	44.605	Ciona_savignyi
ENSFHEG00000007398	lig4	89	64.784	ENSCANG00000005805	LIG4	99	64.784	Colobus_angolensis_palliatus
ENSFHEG00000007398	lig4	89	65.155	ENSCGRG00001012072	Lig4	99	65.155	Cricetulus_griseus_chok1gshd
ENSFHEG00000007398	lig4	89	65.155	ENSCGRG00000013417	Lig4	99	65.155	Cricetulus_griseus_crigri
ENSFHEG00000007398	lig4	88	85.473	ENSCSEG00000013905	lig4	96	85.473	Cynoglossus_semilaevis
ENSFHEG00000007398	lig4	91	90.899	ENSCVAG00000007896	lig4	100	90.789	Cyprinodon_variegatus
ENSFHEG00000007398	lig4	91	79.912	ENSDARG00000060620	lig4	100	79.693	Danio_rerio
ENSFHEG00000007398	lig4	89	64.934	ENSDNOG00000000513	LIG4	99	64.934	Dasypus_novemcinctus
ENSFHEG00000007398	lig4	89	65.670	ENSDORG00000027303	Lig4	99	65.449	Dipodomys_ordii
ENSFHEG00000007398	lig4	78	30.788	FBgn0030506	Lig4	85	31.407	Drosophila_melanogaster
ENSFHEG00000007398	lig4	89	63.082	ENSETEG00000015563	LIG4	100	63.193	Echinops_telfairi
ENSFHEG00000007398	lig4	92	44.593	ENSEBUG00000014243	lig4	99	44.503	Eptatretus_burgeri
ENSFHEG00000007398	lig4	89	64.784	ENSEASG00005022073	LIG4	99	64.784	Equus_asinus_asinus
ENSFHEG00000007398	lig4	89	64.895	ENSECAG00000003257	LIG4	99	64.895	Equus_caballus
ENSFHEG00000007398	lig4	90	82.656	ENSELUG00000006787	lig4	99	82.766	Esox_lucius
ENSFHEG00000007398	lig4	89	64.230	ENSFCAG00000031985	LIG4	99	64.230	Felis_catus
ENSFHEG00000007398	lig4	80	68.727	ENSFALG00000004214	LIG4	98	68.889	Ficedula_albicollis
ENSFHEG00000007398	lig4	89	64.120	ENSFDAG00000008973	LIG4	99	63.898	Fukomys_damarensis
ENSFHEG00000007398	lig4	77	78.811	ENSGMOG00000012843	lig4	99	78.811	Gadus_morhua
ENSFHEG00000007398	lig4	91	65.536	ENSGALG00000016854	LIG4	100	65.536	Gallus_gallus
ENSFHEG00000007398	lig4	91	90.810	ENSGAFG00000019779	lig4	96	91.028	Gambusia_affinis
ENSFHEG00000007398	lig4	90	84.675	ENSGACG00000014135	lig4	99	84.675	Gasterosteus_aculeatus
ENSFHEG00000007398	lig4	89	65.227	ENSGGOG00000027771	LIG4	99	65.227	Gorilla_gorilla
ENSFHEG00000007398	lig4	90	88.022	ENSHBUG00000006245	lig4	100	87.925	Haplochromis_burtoni
ENSFHEG00000007398	lig4	89	64.673	ENSHGLG00000000718	LIG4	99	64.563	Heterocephalus_glaber_female
ENSFHEG00000007398	lig4	89	64.673	ENSHGLG00100003265	LIG4	99	64.563	Heterocephalus_glaber_male
ENSFHEG00000007398	lig4	91	82.475	ENSHCOG00000012010	lig4	100	82.475	Hippocampus_comes
ENSFHEG00000007398	lig4	91	78.375	ENSIPUG00000013748	lig4	100	78.375	Ictalurus_punctatus
ENSFHEG00000007398	lig4	89	65.559	ENSSTOG00000024303	LIG4	99	65.559	Ictidomys_tridecemlineatus
ENSFHEG00000007398	lig4	90	64.758	ENSJJAG00000006750	Lig4	99	64.758	Jaculus_jaculus
ENSFHEG00000007398	lig4	91	87.596	ENSKMAG00000001149	lig4	100	87.596	Kryptolebias_marmoratus
ENSFHEG00000007398	lig4	82	86.457	ENSLBEG00000014578	lig4	100	86.457	Labrus_bergylta
ENSFHEG00000007398	lig4	91	67.873	ENSLACG00000003282	LIG4	100	67.873	Latimeria_chalumnae
ENSFHEG00000007398	lig4	92	72.264	ENSLOCG00000008901	lig4	99	72.264	Lepisosteus_oculatus
ENSFHEG00000007398	lig4	90	64.066	ENSLAFG00000031152	LIG4	99	64.066	Loxodonta_africana
ENSFHEG00000007398	lig4	89	65.338	ENSMFAG00000037235	LIG4	99	65.338	Macaca_fascicularis
ENSFHEG00000007398	lig4	89	65.116	ENSMMUG00000008874	LIG4	99	65.116	Macaca_mulatta
ENSFHEG00000007398	lig4	89	65.338	ENSMNEG00000023575	LIG4	99	65.338	Macaca_nemestrina
ENSFHEG00000007398	lig4	89	65.006	ENSMLEG00000026720	LIG4	99	65.006	Mandrillus_leucophaeus
ENSFHEG00000007398	lig4	91	88.210	ENSMAMG00000008472	lig4	100	88.210	Mastacembelus_armatus
ENSFHEG00000007398	lig4	90	88.242	ENSMZEG00005001855	lig4	99	88.242	Maylandia_zebra
ENSFHEG00000007398	lig4	91	65.646	ENSMGAG00000015532	LIG4	100	65.646	Meleagris_gallopavo
ENSFHEG00000007398	lig4	89	64.452	ENSMOCG00000019000	Lig4	99	64.452	Microtus_ochrogaster
ENSFHEG00000007398	lig4	91	86.608	ENSMMOG00000004390	lig4	100	86.608	Mola_mola
ENSFHEG00000007398	lig4	90	65.203	ENSMODG00000025064	LIG4	99	65.423	Monodelphis_domestica
ENSFHEG00000007398	lig4	91	87.486	ENSMALG00000008555	lig4	100	87.486	Monopterus_albus
ENSFHEG00000007398	lig4	90	64.066	MGP_CAROLIEiJ_G0030809	Lig4	99	64.066	Mus_caroli
ENSFHEG00000007398	lig4	90	63.626	ENSMUSG00000049717	Lig4	99	63.626	Mus_musculus
ENSFHEG00000007398	lig4	90	64.176	MGP_PahariEiJ_G0021270	Lig4	99	64.066	Mus_pahari
ENSFHEG00000007398	lig4	90	63.956	MGP_SPRETEiJ_G0031917	Lig4	99	63.956	Mus_spretus
ENSFHEG00000007398	lig4	90	64.868	ENSMPUG00000018675	LIG4	99	64.648	Mustela_putorius_furo
ENSFHEG00000007398	lig4	89	65.338	ENSMLUG00000001267	LIG4	99	65.227	Myotis_lucifugus
ENSFHEG00000007398	lig4	89	65.006	ENSNGAG00000013258	Lig4	99	65.006	Nannospalax_galili
ENSFHEG00000007398	lig4	90	88.022	ENSNBRG00000021252	lig4	100	87.925	Neolamprologus_brichardi
ENSFHEG00000007398	lig4	89	65.006	ENSNLEG00000007888	LIG4	99	64.895	Nomascus_leucogenys
ENSFHEG00000007398	lig4	89	63.898	ENSOPRG00000005765	LIG4	99	63.677	Ochotona_princeps
ENSFHEG00000007398	lig4	89	64.120	ENSODEG00000019683	LIG4	99	64.009	Octodon_degus
ENSFHEG00000007398	lig4	91	87.717	ENSONIG00000011969	lig4	99	87.717	Oreochromis_niloticus
ENSFHEG00000007398	lig4	89	64.452	ENSOCUG00000015734	LIG4	99	64.452	Oryctolagus_cuniculus
ENSFHEG00000007398	lig4	90	84.228	ENSORLG00000004041	lig4	99	84.228	Oryzias_latipes
ENSFHEG00000007398	lig4	90	84.556	ENSORLG00020019607	lig4	99	84.556	Oryzias_latipes_hni
ENSFHEG00000007398	lig4	90	84.337	ENSORLG00015017754	lig4	99	84.337	Oryzias_latipes_hsok
ENSFHEG00000007398	lig4	68	88.501	ENSOMEG00000003459	lig4	99	88.501	Oryzias_melastigma
ENSFHEG00000007398	lig4	89	65.078	ENSOGAG00000032120	LIG4	99	65.078	Otolemur_garnettii
ENSFHEG00000007398	lig4	73	68.792	ENSOARG00000005590	LIG4	97	68.792	Ovis_aries
ENSFHEG00000007398	lig4	89	65.227	ENSPPAG00000032998	LIG4	99	65.227	Pan_paniscus
ENSFHEG00000007398	lig4	89	64.563	ENSPPRG00000017804	LIG4	99	64.563	Panthera_pardus
ENSFHEG00000007398	lig4	89	64.673	ENSPTIG00000010051	LIG4	99	64.673	Panthera_tigris_altaica
ENSFHEG00000007398	lig4	89	65.338	ENSPTRG00000006025	LIG4	99	65.338	Pan_troglodytes
ENSFHEG00000007398	lig4	90	65.165	ENSPANG00000007562	LIG4	99	65.165	Papio_anubis
ENSFHEG00000007398	lig4	91	77.948	ENSPKIG00000011645	lig4	99	77.948	Paramormyrops_kingsleyae
ENSFHEG00000007398	lig4	90	68.653	ENSPSIG00000001504	LIG4	100	68.311	Pelodiscus_sinensis
ENSFHEG00000007398	lig4	89	81.006	ENSPMGG00000013486	lig4	100	80.568	Periophthalmus_magnuspinnatus
ENSFHEG00000007398	lig4	89	64.381	ENSPEMG00000000076	Lig4	99	64.381	Peromyscus_maniculatus_bairdii
ENSFHEG00000007398	lig4	90	64.686	ENSPCIG00000021882	LIG4	99	64.435	Phascolarctos_cinereus
ENSFHEG00000007398	lig4	91	91.886	ENSPFOG00000000797	lig4	100	92.434	Poecilia_formosa
ENSFHEG00000007398	lig4	91	91.776	ENSPLAG00000001196	lig4	100	92.325	Poecilia_latipinna
ENSFHEG00000007398	lig4	91	91.776	ENSPMEG00000021353	lig4	100	92.325	Poecilia_mexicana
ENSFHEG00000007398	lig4	91	91.228	ENSPREG00000007323	lig4	100	91.776	Poecilia_reticulata
ENSFHEG00000007398	lig4	89	64.895	ENSPPYG00000005540	LIG4	99	64.895	Pongo_abelii
ENSFHEG00000007398	lig4	89	64.452	ENSPVAG00000016403	LIG4	99	64.452	Pteropus_vampyrus
ENSFHEG00000007398	lig4	90	88.242	ENSPNYG00000009660	lig4	99	88.242	Pundamilia_nyererei
ENSFHEG00000007398	lig4	89	82.294	ENSPNAG00000028056	lig4	99	82.294	Pygocentrus_nattereri
ENSFHEG00000007398	lig4	89	82.294	ENSPNAG00000028069	LIG4	99	82.294	Pygocentrus_nattereri
ENSFHEG00000007398	lig4	90	63.846	ENSRNOG00000014605	Lig4	99	63.846	Rattus_norvegicus
ENSFHEG00000007398	lig4	89	64.341	ENSRBIG00000039962	LIG4	99	64.341	Rhinopithecus_bieti
ENSFHEG00000007398	lig4	89	65.006	ENSRROG00000006040	LIG4	99	65.006	Rhinopithecus_roxellana
ENSFHEG00000007398	lig4	89	64.784	ENSSBOG00000019029	LIG4	99	64.784	Saimiri_boliviensis_boliviensis
ENSFHEG00000007398	lig4	90	63.256	ENSSHAG00000009525	LIG4	99	63.337	Sarcophilus_harrisii
ENSFHEG00000007398	lig4	91	79.034	ENSSFOG00015012835	lig4	100	79.034	Scleropages_formosus
ENSFHEG00000007398	lig4	91	82.766	ENSSMAG00000011267	lig4	100	82.766	Scophthalmus_maximus
ENSFHEG00000007398	lig4	91	87.418	ENSSDUG00000010343	lig4	100	87.418	Seriola_dumerili
ENSFHEG00000007398	lig4	91	85.996	ENSSLDG00000003239	lig4	100	85.996	Seriola_lalandi_dorsalis
ENSFHEG00000007398	lig4	90	64.466	ENSSARG00000006573	LIG4	99	64.466	Sorex_araneus
ENSFHEG00000007398	lig4	83	68.690	ENSSPUG00000002444	LIG4	100	68.571	Sphenodon_punctatus
ENSFHEG00000007398	lig4	91	88.694	ENSSPAG00000001609	lig4	100	88.694	Stegastes_partitus
ENSFHEG00000007398	lig4	90	64.609	ENSSSCG00000009540	LIG4	99	64.609	Sus_scrofa
ENSFHEG00000007398	lig4	89	67.444	ENSTGUG00000010795	LIG4	99	67.444	Taeniopygia_guttata
ENSFHEG00000007398	lig4	91	86.608	ENSTRUG00000009984	lig4	100	86.608	Takifugu_rubripes
ENSFHEG00000007398	lig4	91	84.193	ENSTNIG00000010348	lig4	100	84.413	Tetraodon_nigroviridis
ENSFHEG00000007398	lig4	89	65.116	ENSTBEG00000017741	LIG4	99	64.784	Tupaia_belangeri
ENSFHEG00000007398	lig4	89	64.199	ENSTTRG00000012660	LIG4	99	64.009	Tursiops_truncatus
ENSFHEG00000007398	lig4	89	64.270	ENSUAMG00000003773	LIG4	99	63.987	Ursus_americanus
ENSFHEG00000007398	lig4	89	68.000	ENSXETG00000002654	lig4	99	68.000	Xenopus_tropicalis
ENSFHEG00000007398	lig4	91	91.228	ENSXCOG00000017401	lig4	100	91.776	Xiphophorus_couchianus
ENSFHEG00000007398	lig4	91	91.566	ENSXMAG00000015142	lig4	100	92.114	Xiphophorus_maculatus