EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000007472 (Gene tree)
Gene ID: 105918881
Gene Symbol: srsf4
Alias: sfrs4|wu:fb37e02|wu:fj35e06|zgc:152957|zgc:55809
Full Name: serine/arginine-rich splicing factor 4-like
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 7679 bases
Position: chrKN805895.1:20199-27877
Accession: 105918881
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000006273	RRM_1	PF00076.22	6.1e-32	1	2
ENSFHEP00000006273	RRM_1	PF00076.22	6.1e-32	2	2
ENSFHEP00000025198	RRM_1	PF00076.22	3.7e-17	1	1
ENSFHEP00000025195	RRM_1	PF00076.22	4.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000005838	-	282	-	ENSFHEP00000025198	93 (aa)	-	-
ENSFHET00000005757	-	1089	XM_012854050	ENSFHEP00000006273	362 (aa)	XP_012709504	-
ENSFHET00000005840	-	303	-	ENSFHEP00000025195	100 (aa)	-	-

Gene Model

Click here to download ENSFHEG00000007472's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000007472's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000007472	srsf4	73	34.211	ENSFHEG00000002580	cirbpa	54	37.079
ENSFHEG00000007472	srsf4	80	42.857	ENSFHEG00000014610	-	62	42.308
ENSFHEG00000007472	srsf4	74	44.595	ENSFHEG00000017425	-	89	45.402
ENSFHEG00000007472	srsf4	69	36.923	ENSFHEG00000000223	-	66	36.923
ENSFHEG00000007472	srsf4	85	42.857	ENSFHEG00000020851	srsf9	74	41.489
ENSFHEG00000007472	srsf4	82	81.579	ENSFHEG00000023065	srsf6a	54	74.194
ENSFHEG00000007472	srsf4	98	61.538	ENSFHEG00000003955	srsf5a	96	60.140
ENSFHEG00000007472	srsf4	80	44.156	ENSFHEG00000005368	srsf3b	62	44.156
ENSFHEG00000007472	srsf4	71	49.296	ENSFHEG00000003174	srsf1a	70	44.509
ENSFHEG00000007472	srsf4	97	60.194	ENSFHEG00000009476	srsf5b	59	63.587

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000007472	srsf4	90	86.905	ENSG00000116350	SRSF4	69	77.419	Homo_sapiens
ENSFHEG00000007472	srsf4	90	76.190	ENSAPOG00000023399	-	60	76.404	Acanthochromis_polyacanthus
ENSFHEG00000007472	srsf4	88	98.780	ENSAPOG00000020244	srsf4	87	79.630	Acanthochromis_polyacanthus
ENSFHEG00000007472	srsf4	88	97.561	ENSACIG00000018649	srsf4	90	94.167	Amphilophus_citrinellus
ENSFHEG00000007472	srsf4	90	98.810	ENSAOCG00000005997	srsf4	92	95.031	Amphiprion_ocellaris
ENSFHEG00000007472	srsf4	91	97.647	ENSAPEG00000020870	-	65	98.810	Amphiprion_percula
ENSFHEG00000007472	srsf4	60	71.837	ENSAPEG00000020826	srsf4	77	71.193	Amphiprion_percula
ENSFHEG00000007472	srsf4	94	93.103	ENSATEG00000005680	srsf4	60	92.265	Anabas_testudineus
ENSFHEG00000007472	srsf4	88	97.561	ENSACLG00000003395	srsf4	68	97.561	Astatotilapia_calliptera
ENSFHEG00000007472	srsf4	82	81.579	ENSACLG00000021269	-	51	74.731	Astatotilapia_calliptera
ENSFHEG00000007472	srsf4	98	82.418	ENSAMXG00000034811	srsf4	81	89.157	Astyanax_mexicanus
ENSFHEG00000007472	srsf4	90	86.905	ENSBTAG00000013309	SRSF4	52	71.206	Bos_taurus
ENSFHEG00000007472	srsf4	75	68.571	WBGene00004698	rsp-1	97	50.694	Caenorhabditis_elegans
ENSFHEG00000007472	srsf4	81	65.333	ENSCING00000024718	-	56	55.959	Ciona_intestinalis
ENSFHEG00000007472	srsf4	83	71.429	ENSCING00000011362	-	65	56.757	Ciona_intestinalis
ENSFHEG00000007472	srsf4	87	69.512	ENSCING00000020631	-	79	62.176	Ciona_intestinalis
ENSFHEG00000007472	srsf4	83	73.077	ENSCING00000012370	-	68	60.804	Ciona_intestinalis
ENSFHEG00000007472	srsf4	74	75.362	ENSCSAVG00000002581	-	70	63.043	Ciona_savignyi
ENSFHEG00000007472	srsf4	90	86.905	ENSCGRG00001021115	Srsf4	52	68.110	Cricetulus_griseus_chok1gshd
ENSFHEG00000007472	srsf4	88	98.780	ENSCSEG00000010058	srsf4	98	95.588	Cynoglossus_semilaevis
ENSFHEG00000007472	srsf4	76	66.524	ENSCVAG00000004342	srsf4	80	72.103	Cyprinodon_variegatus
ENSFHEG00000007472	srsf4	98	82.418	ENSDARG00000105293	srsf4	86	82.418	Danio_rerio
ENSFHEG00000007472	srsf4	80	67.568	FBgn0004587	B52	97	58.779	Drosophila_melanogaster
ENSFHEG00000007472	srsf4	56	64.286	ENSEBUG00000003129	srsf4	69	60.000	Eptatretus_burgeri
ENSFHEG00000007472	srsf4	91	67.059	ENSEBUG00000001681	srsf4	67	59.777	Eptatretus_burgeri
ENSFHEG00000007472	srsf4	82	81.579	ENSELUG00000017551	srsf4	93	75.385	Esox_lucius
ENSFHEG00000007472	srsf4	90	86.905	ENSFCAG00000027821	SRSF4	52	71.206	Felis_catus
ENSFHEG00000007472	srsf4	84	96.154	ENSGMOG00000012906	srsf4	57	89.888	Gadus_morhua
ENSFHEG00000007472	srsf4	91	98.824	ENSGAFG00000018496	srsf4	98	95.588	Gambusia_affinis
ENSFHEG00000007472	srsf4	84	100.000	ENSGACG00000002389	srsf4	56	92.778	Gasterosteus_aculeatus
ENSFHEG00000007472	srsf4	82	81.579	ENSHBUG00000011326	-	73	53.558	Haplochromis_burtoni
ENSFHEG00000007472	srsf4	88	97.561	ENSHBUG00000016897	-	91	82.000	Haplochromis_burtoni
ENSFHEG00000007472	srsf4	88	98.780	ENSHCOG00000012540	srsf4	84	98.485	Hippocampus_comes
ENSFHEG00000007472	srsf4	91	97.647	ENSKMAG00000013631	srsf4	88	81.994	Kryptolebias_marmoratus
ENSFHEG00000007472	srsf4	88	98.780	ENSLBEG00000017163	-	76	98.780	Labrus_bergylta
ENSFHEG00000007472	srsf4	78	82.192	ENSLOCG00000001442	-	50	75.410	Lepisosteus_oculatus
ENSFHEG00000007472	srsf4	95	95.455	ENSMAMG00000004888	srsf4	87	82.166	Mastacembelus_armatus
ENSFHEG00000007472	srsf4	88	97.561	ENSMZEG00005026275	srsf4	68	97.561	Maylandia_zebra
ENSFHEG00000007472	srsf4	88	97.561	ENSMZEG00005025078	-	74	97.561	Maylandia_zebra
ENSFHEG00000007472	srsf4	90	86.905	ENSMOCG00000013319	Srsf4	53	67.557	Microtus_ochrogaster
ENSFHEG00000007472	srsf4	80	100.000	ENSMMOG00000013653	srsf4	82	79.798	Mola_mola
ENSFHEG00000007472	srsf4	90	86.905	ENSMODG00000011052	SRSF4	55	87.640	Monodelphis_domestica
ENSFHEG00000007472	srsf4	97	67.778	ENSMALG00000010062	-	97	67.778	Monopterus_albus
ENSFHEG00000007472	srsf4	87	100.000	ENSMALG00000013392	srsf4	83	95.588	Monopterus_albus
ENSFHEG00000007472	srsf4	90	86.905	MGP_CAROLIEiJ_G0026555	Srsf4	52	68.110	Mus_caroli
ENSFHEG00000007472	srsf4	90	86.905	ENSMUSG00000028911	Srsf4	52	68.110	Mus_musculus
ENSFHEG00000007472	srsf4	90	86.905	MGP_SPRETEiJ_G0027535	Srsf4	52	68.110	Mus_spretus
ENSFHEG00000007472	srsf4	88	97.561	ENSNBRG00000014840	-	77	97.561	Neolamprologus_brichardi
ENSFHEG00000007472	srsf4	87	69.512	ENSNLEG00000030787	-	62	70.225	Nomascus_leucogenys
ENSFHEG00000007472	srsf4	90	85.714	ENSOPRG00000010098	SRSF4	51	69.880	Ochotona_princeps
ENSFHEG00000007472	srsf4	88	97.561	ENSONIG00000013730	srsf4	83	77.370	Oreochromis_niloticus
ENSFHEG00000007472	srsf4	88	98.780	ENSORLG00000028783	-	75	98.780	Oryzias_latipes
ENSFHEG00000007472	srsf4	88	98.780	ENSORLG00020016052	srsf4	66	95.506	Oryzias_latipes_hni
ENSFHEG00000007472	srsf4	88	98.780	ENSORLG00015007566	srsf4	86	95.588	Oryzias_latipes_hsok
ENSFHEG00000007472	srsf4	88	98.780	ENSOMEG00000005541	srsf4	89	82.166	Oryzias_melastigma
ENSFHEG00000007472	srsf4	56	78.846	ENSOARG00000002451	SRSF4	50	81.579	Ovis_aries
ENSFHEG00000007472	srsf4	90	86.905	ENSPPRG00000016248	SRSF4	52	71.206	Panthera_pardus
ENSFHEG00000007472	srsf4	88	96.341	ENSPMGG00000013436	srsf4	95	85.827	Periophthalmus_magnuspinnatus
ENSFHEG00000007472	srsf4	82	71.053	ENSPMAG00000009397	srsf4	68	64.674	Petromyzon_marinus
ENSFHEG00000007472	srsf4	90	98.810	ENSPFOG00000001306	srsf4	99	82.645	Poecilia_formosa
ENSFHEG00000007472	srsf4	91	98.824	ENSPLAG00000008812	srsf4	89	90.032	Poecilia_latipinna
ENSFHEG00000007472	srsf4	91	98.824	ENSPMEG00000023638	srsf4	86	95.652	Poecilia_mexicana
ENSFHEG00000007472	srsf4	90	98.810	ENSPREG00000009639	srsf4	85	95.652	Poecilia_reticulata
ENSFHEG00000007472	srsf4	88	97.561	ENSPNYG00000003796	srsf4	56	93.370	Pundamilia_nyererei
ENSFHEG00000007472	srsf4	86	96.250	ENSPNAG00000023844	srsf4	53	89.385	Pygocentrus_nattereri
ENSFHEG00000007472	srsf4	90	86.905	ENSRNOG00000010007	Srsf4	52	68.110	Rattus_norvegicus
ENSFHEG00000007472	srsf4	57	79.245	ENSSHAG00000012407	SRSF4	51	85.034	Sarcophilus_harrisii
ENSFHEG00000007472	srsf4	90	94.048	ENSSFOG00015020292	srsf4	82	90.265	Scleropages_formosus
ENSFHEG00000007472	srsf4	90	98.810	ENSSDUG00000007387	srsf4	86	74.098	Seriola_dumerili
ENSFHEG00000007472	srsf4	51	100.000	ENSSLDG00000009745	srsf4	92	58.131	Seriola_lalandi_dorsalis
ENSFHEG00000007472	srsf4	92	79.310	ENSSPUG00000019124	-	98	79.310	Sphenodon_punctatus
ENSFHEG00000007472	srsf4	87	100.000	ENSSPAG00000014538	srsf4	83	94.167	Stegastes_partitus
ENSFHEG00000007472	srsf4	89	97.590	ENSTRUG00000011891	srsf4	87	76.471	Takifugu_rubripes
ENSFHEG00000007472	srsf4	87	98.765	ENSTNIG00000005573	srsf4	89	73.529	Tetraodon_nigroviridis
ENSFHEG00000007472	srsf4	90	86.905	ENSTTRG00000002572	SRSF4	52	69.615	Tursiops_truncatus
ENSFHEG00000007472	srsf4	91	98.824	ENSXCOG00000018826	srsf4	95	87.786	Xiphophorus_couchianus
ENSFHEG00000007472	srsf4	82	78.947	ENSXCOG00000003212	-	55	70.745	Xiphophorus_couchianus
ENSFHEG00000007472	srsf4	65	75.000	ENSXMAG00000005545	srsf4	70	70.507	Xiphophorus_maculatus
ENSFHEG00000007472	srsf4	97	92.222	ENSXMAG00000021549	-	70	98.795	Xiphophorus_maculatus