EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSFHEG00000007548 (Gene tree)
Gene ID
105925958
Gene Symbol
pabpc4
Alias
cb12|sb:cb12
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Fundulus_heteroclitus
Status
putative
Strand
Minus strand
Length
13551 bases
Position
chrKN811291.1:2067277-2080827
Accession
105925958
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSFHEP00000006436PABPPF00658.185.4e-3111
ENSFHEP00000006453PABPPF00658.186.1e-3111
ENSFHEP00000006436RRM_5PF13893.61.3e-0911
ENSFHEP00000006453RRM_5PF13893.61.8e-0911
ENSFHEP00000006436RRM_1PF00076.224.9e-9114
ENSFHEP00000006436RRM_1PF00076.224.9e-9124
ENSFHEP00000006436RRM_1PF00076.224.9e-9134
ENSFHEP00000006436RRM_1PF00076.224.9e-9144
ENSFHEP00000006453RRM_1PF00076.226.6e-9114
ENSFHEP00000006453RRM_1PF00076.226.6e-9124
ENSFHEP00000006453RRM_1PF00076.226.6e-9134
ENSFHEP00000006453RRM_1PF00076.226.6e-9144
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSFHET00000005471-2977XM_012862086ENSFHEP00000006453626 (aa)XP_012717540A0A146X5Q1
ENSFHET00000005489-1782-ENSFHEP00000006436593 (aa)--
Gene Model
Click here to download ENSFHEG00000007548's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000007548's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSFHEG00000007548pabpc46130.601ENSFHEG00000014715-9730.601
ENSFHEG00000007548pabpc46032.061ENSFHEG00000018000ncl6130.723
ENSFHEG00000007548pabpc49877.070ENSFHEG00000018979pabpc1a9876.752
ENSFHEG00000007548pabpc46334.940ENSFHEG00000004530elavl48134.940
ENSFHEG00000007548pabpc46733.333ENSFHEG00000012578rbm196133.333
ENSFHEG00000007548pabpc46333.010ENSFHEG00000004787RBMS35031.068
ENSFHEG00000007548pabpc45338.636ENSFHEG00000010537-5838.636
ENSFHEG00000007548pabpc46437.975ENSFHEG00000003421rbm39b5137.349
ENSFHEG00000007548pabpc49867.195ENSFHEG00000003398pabpc1l10067.195
ENSFHEG00000007548pabpc410076.636ENSFHEG00000008186pabpc1b9976.862
ENSFHEG00000007548pabpc45237.500ENSFHEG00000012816celf5a6337.500
ENSFHEG00000007548pabpc46331.333ENSFHEG00000010307ELAVL28531.333
ENSFHEG00000007548pabpc46230.726ENSFHEG00000001267trnau1apb5431.361
ENSFHEG00000007548pabpc46131.492ENSFHEG00000002832tia1l8131.492
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSFHEG00000007548pabpc49987.123ENSG00000090621PABPC49996.396Homo_sapiens
ENSFHEG00000007548pabpc410096.805ENSAPOG00000001161pabpc49996.805Acanthochromis_polyacanthus
ENSFHEG00000007548pabpc49390.807ENSAMEG00000011535-10079.790Ailuropoda_melanoleuca
ENSFHEG00000007548pabpc49850.000ENSAMEG00000015083-9949.751Ailuropoda_melanoleuca
ENSFHEG00000007548pabpc410095.721ENSACIG00000023343pabpc49995.721Amphilophus_citrinellus
ENSFHEG00000007548pabpc410096.645ENSAOCG00000021529pabpc49996.645Amphiprion_ocellaris
ENSFHEG00000007548pabpc410096.645ENSAPEG00000019196pabpc49996.645Amphiprion_percula
ENSFHEG00000007548pabpc49995.961ENSATEG00000007402pabpc49995.534Anabas_testudineus
ENSFHEG00000007548pabpc49985.827ENSAPLG00000009729-10085.197Anas_platyrhynchos
ENSFHEG00000007548pabpc49885.284ENSACAG00000002544PABPC410084.574Anolis_carolinensis
ENSFHEG00000007548pabpc49688.571ENSANAG00000025079PABPC410083.255Aotus_nancymaae
ENSFHEG00000007548pabpc410096.486ENSACLG00000019558pabpc49996.486Astatotilapia_calliptera
ENSFHEG00000007548pabpc49986.371ENSAMXG00000018779pabpc49986.371Astyanax_mexicanus
ENSFHEG00000007548pabpc49391.031ENSBTAG00000017125PABPC410081.498Bos_taurus
ENSFHEG00000007548pabpc46184.431ENSBTAG00000048536-9384.431Bos_taurus
ENSFHEG00000007548pabpc47486.224ENSCJAG00000045953-8579.018Callithrix_jacchus
ENSFHEG00000007548pabpc49688.571ENSCJAG00000002512-10083.255Callithrix_jacchus
ENSFHEG00000007548pabpc410083.645ENSCAFG00000003081PABPC410083.568Canis_familiaris
ENSFHEG00000007548pabpc49391.031ENSCAFG00020004161PABPC410079.940Canis_lupus_dingo
ENSFHEG00000007548pabpc49390.807ENSCHIG00000019398-10079.641Capra_hircus
ENSFHEG00000007548pabpc410065.533ENSCHIG00000023385-10065.070Capra_hircus
ENSFHEG00000007548pabpc410084.038ENSTSYG00000006532PABPC410083.412Carlito_syrichta
ENSFHEG00000007548pabpc49588.720ENSCAPG00000015984PABPC410082.748Cavia_aperea
ENSFHEG00000007548pabpc49688.793ENSCPOG00000009552PABPC410083.412Cavia_porcellus
ENSFHEG00000007548pabpc49888.362ENSCCAG00000037306PABPC410083.255Cebus_capucinus
ENSFHEG00000007548pabpc49688.578ENSCATG00000042164PABPC410083.412Cercocebus_atys
ENSFHEG00000007548pabpc49689.524ENSCLAG00000011899PABPC410083.412Chinchilla_lanigera
ENSFHEG00000007548pabpc49688.578ENSCSAG00000001135PABPC410079.790Chlorocebus_sabaeus
ENSFHEG00000007548pabpc49189.474ENSCHOG00000005327PABPC47990.761Choloepus_hoffmanni
ENSFHEG00000007548pabpc49986.457ENSCPBG00000001038PABPC410085.827Chrysemys_picta_bellii
ENSFHEG00000007548pabpc49589.011ENSCANG00000034177PABPC410083.651Colobus_angolensis_palliatus
ENSFHEG00000007548pabpc49885.366ENSCGRG00001018166Pabpc410084.236Cricetulus_griseus_chok1gshd
ENSFHEG00000007548pabpc49785.644ENSCGRG00000009777Pabpc410084.491Cricetulus_griseus_crigri
ENSFHEG00000007548pabpc410095.694ENSCSEG00000000130pabpc410095.694Cynoglossus_semilaevis
ENSFHEG00000007548pabpc49999.026ENSCVAG00000019246pabpc410099.026Cyprinodon_variegatus
ENSFHEG00000007548pabpc49892.823ENSDARG00000059259pabpc410092.562Danio_rerio
ENSFHEG00000007548pabpc49982.662ENSDNOG00000018444-10082.394Dasypus_novemcinctus
ENSFHEG00000007548pabpc410082.290ENSDORG00000011581Pabpc410081.623Dipodomys_ordii
ENSFHEG00000007548pabpc48554.562ENSETEG00000009172-9952.321Echinops_telfairi
ENSFHEG00000007548pabpc410090.625ENSETEG00000018453-8490.625Echinops_telfairi
ENSFHEG00000007548pabpc49777.073ENSEBUG00000013782pabpc49976.433Eptatretus_burgeri
ENSFHEG00000007548pabpc49976.948ENSEBUG00000000992pabpc49976.630Eptatretus_burgeri
ENSFHEG00000007548pabpc49688.578ENSEASG00005014119PABPC410079.790Equus_asinus_asinus
ENSFHEG00000007548pabpc49688.578ENSECAG00000009396PABPC410079.790Equus_caballus
ENSFHEG00000007548pabpc49779.294ENSEEUG00000002962PABPC410078.144Erinaceus_europaeus
ENSFHEG00000007548pabpc49893.153ENSELUG00000003195pabpc410092.488Esox_lucius
ENSFHEG00000007548pabpc49391.031ENSFCAG00000015254-10083.568Felis_catus
ENSFHEG00000007548pabpc49986.142ENSFALG00000000543PABPC410085.512Ficedula_albicollis
ENSFHEG00000007548pabpc48952.621ENSFDAG00000010581-10050.767Fukomys_damarensis
ENSFHEG00000007548pabpc49688.578ENSFDAG00000020016-10079.641Fukomys_damarensis
ENSFHEG00000007548pabpc410091.209ENSGMOG00000019025pabpc49991.209Gadus_morhua
ENSFHEG00000007548pabpc49986.614ENSGALG00000003800PABPC410085.984Gallus_gallus
ENSFHEG00000007548pabpc49999.043ENSGAFG00000018195pabpc410099.043Gambusia_affinis
ENSFHEG00000007548pabpc410093.770ENSGACG00000007179pabpc49993.770Gasterosteus_aculeatus
ENSFHEG00000007548pabpc49986.614ENSGAGG00000001888PABPC410085.984Gopherus_agassizii
ENSFHEG00000007548pabpc49688.571ENSGGOG00000004002PABPC410083.255Gorilla_gorilla
ENSFHEG00000007548pabpc410096.326ENSHBUG00000020206pabpc49996.326Haplochromis_burtoni
ENSFHEG00000007548pabpc49688.578ENSHGLG00000011162PABPC410083.255Heterocephalus_glaber_female
ENSFHEG00000007548pabpc410083.385ENSHGLG00100001580PABPC410083.255Heterocephalus_glaber_male
ENSFHEG00000007548pabpc410094.409ENSHCOG00000012694pabpc49995.367Hippocampus_comes
ENSFHEG00000007548pabpc49791.935ENSIPUG00000016620pabpc410091.009Ictalurus_punctatus
ENSFHEG00000007548pabpc410085.167ENSSTOG00000010416PABPC410084.530Ictidomys_tridecemlineatus
ENSFHEG00000007548pabpc49389.524ENSJJAG00000007781Pabpc410080.398Jaculus_jaculus
ENSFHEG00000007548pabpc410095.694ENSKMAG00000013597pabpc410095.694Kryptolebias_marmoratus
ENSFHEG00000007548pabpc410094.921ENSLBEG00000013654pabpc410094.921Labrus_bergylta
ENSFHEG00000007548pabpc49986.950ENSLACG00000011907PABPC410086.478Latimeria_chalumnae
ENSFHEG00000007548pabpc49991.811ENSLOCG00000001877pabpc410091.811Lepisosteus_oculatus
ENSFHEG00000007548pabpc410085.327ENSLAFG00000000151PABPC410084.689Loxodonta_africana
ENSFHEG00000007548pabpc49688.578ENSMFAG00000041481PABPC410083.412Macaca_fascicularis
ENSFHEG00000007548pabpc49688.578ENSMMUG00000007497PABPC410079.790Macaca_mulatta
ENSFHEG00000007548pabpc49688.578ENSMNEG00000043054PABPC410083.412Macaca_nemestrina
ENSFHEG00000007548pabpc49688.578ENSMLEG00000040716PABPC410083.412Mandrillus_leucophaeus
ENSFHEG00000007548pabpc49996.764ENSMAMG00000010025pabpc49996.006Mastacembelus_armatus
ENSFHEG00000007548pabpc410096.326ENSMZEG00005006141pabpc49996.326Maylandia_zebra
ENSFHEG00000007548pabpc49883.277ENSMGAG00000005408PABPC410082.601Meleagris_gallopavo
ENSFHEG00000007548pabpc46180.117ENSMAUG00000004089-9280.117Mesocricetus_auratus
ENSFHEG00000007548pabpc47382.199ENSMAUG00000001295-9778.571Mesocricetus_auratus
ENSFHEG00000007548pabpc49874.233ENSMAUG00000019763-10074.233Mesocricetus_auratus
ENSFHEG00000007548pabpc48393.939ENSMICG00000016633-10084.505Microcebus_murinus
ENSFHEG00000007548pabpc49977.989ENSMICG00000036729-10077.376Microcebus_murinus
ENSFHEG00000007548pabpc49192.632ENSMOCG00000006763Pabpc49982.942Microtus_ochrogaster
ENSFHEG00000007548pabpc410092.013ENSMMOG00000002363pabpc49991.693Mola_mola
ENSFHEG00000007548pabpc46371.733ENSMODG00000018051-9671.733Monodelphis_domestica
ENSFHEG00000007548pabpc45080.392ENSMODG00000019847-6783.673Monodelphis_domestica
ENSFHEG00000007548pabpc49783.821ENSMODG00000017657-10082.451Monodelphis_domestica
ENSFHEG00000007548pabpc410095.860ENSMALG00000011017pabpc49995.860Monopterus_albus
ENSFHEG00000007548pabpc49689.524MGP_CAROLIEiJ_G0026435-10096.454Mus_caroli
ENSFHEG00000007548pabpc49973.380MGP_CAROLIEiJ_G0024864-10074.028Mus_caroli
ENSFHEG00000007548pabpc49689.524ENSMUSG00000011257Pabpc410094.643Mus_musculus
ENSFHEG00000007548pabpc49488.571MGP_PahariEiJ_G0028765Pabpc410097.163Mus_pahari
ENSFHEG00000007548pabpc49289.524MGP_SPRETEiJ_G0027415Pabpc410097.163Mus_spretus
ENSFHEG00000007548pabpc49546.040ENSMPUG00000006836-10045.545Mustela_putorius_furo
ENSFHEG00000007548pabpc49391.031ENSMPUG00000014414-10079.940Mustela_putorius_furo
ENSFHEG00000007548pabpc410085.008ENSMLUG00000012068PABPC410084.370Myotis_lucifugus
ENSFHEG00000007548pabpc410085.327ENSNGAG00000018292Pabpc410084.689Nannospalax_galili
ENSFHEG00000007548pabpc46998.795ENSNBRG00000010047-7298.795Neolamprologus_brichardi
ENSFHEG00000007548pabpc46398.558ENSNBRG00000009708pabpc49898.558Neolamprologus_brichardi
ENSFHEG00000007548pabpc49391.031ENSNLEG00000011928PABPC410083.412Nomascus_leucogenys
ENSFHEG00000007548pabpc48693.651ENSOPRG00000011984PABPC48693.651Ochotona_princeps
ENSFHEG00000007548pabpc49390.807ENSODEG00000006592-10082.942Octodon_degus
ENSFHEG00000007548pabpc45682.857ENSODEG00000013457-10082.857Octodon_degus
ENSFHEG00000007548pabpc49287.850ENSODEG00000017434-10073.237Octodon_degus
ENSFHEG00000007548pabpc410096.326ENSONIG00000008176pabpc49996.326Oreochromis_niloticus
ENSFHEG00000007548pabpc49986.299ENSOANG00000010001PABPC410085.669Ornithorhynchus_anatinus
ENSFHEG00000007548pabpc48893.421ENSOCUG00000000562PABPC48880.063Oryctolagus_cuniculus
ENSFHEG00000007548pabpc49997.840ENSORLG00000017479pabpc49997.840Oryzias_latipes
ENSFHEG00000007548pabpc49997.840ENSORLG00020018644pabpc49997.840Oryzias_latipes_hni
ENSFHEG00000007548pabpc49997.840ENSORLG00015015042pabpc49997.840Oryzias_latipes_hsok
ENSFHEG00000007548pabpc49996.764ENSOMEG00000014410pabpc49996.006Oryzias_melastigma
ENSFHEG00000007548pabpc410081.832ENSOGAG00000004067PABPC410081.402Otolemur_garnettii
ENSFHEG00000007548pabpc49390.807ENSOARG00000020060PABPC410079.641Ovis_aries
ENSFHEG00000007548pabpc49688.571ENSPPAG00000043625PABPC410083.255Pan_paniscus
ENSFHEG00000007548pabpc49391.031ENSPPRG00000024727PABPC410083.568Panthera_pardus
ENSFHEG00000007548pabpc49391.031ENSPTIG00000005829PABPC410083.568Panthera_tigris_altaica
ENSFHEG00000007548pabpc49688.571ENSPTRG00000000573PABPC410083.255Pan_troglodytes
ENSFHEG00000007548pabpc49391.031ENSPANG00000009484PABPC410083.412Papio_anubis
ENSFHEG00000007548pabpc49990.709ENSPKIG00000025356pabpc49990.984Paramormyrops_kingsleyae
ENSFHEG00000007548pabpc49986.929ENSPSIG00000016892PABPC410086.299Pelodiscus_sinensis
ENSFHEG00000007548pabpc410090.895ENSPMGG00000009073pabpc49990.096Periophthalmus_magnuspinnatus
ENSFHEG00000007548pabpc410080.401ENSPEMG00000024193-10080.093Peromyscus_maniculatus_bairdii
ENSFHEG00000007548pabpc49390.583ENSPEMG00000023569-10083.099Peromyscus_maniculatus_bairdii
ENSFHEG00000007548pabpc48875.436ENSPMAG00000002836pabpc410076.307Petromyzon_marinus
ENSFHEG00000007548pabpc49675.210ENSPMAG00000007885pabpc410073.931Petromyzon_marinus
ENSFHEG00000007548pabpc49787.801ENSPCIG00000020674PABPC410095.388Phascolarctos_cinereus
ENSFHEG00000007548pabpc410098.722ENSPFOG00000002682pabpc410098.722Poecilia_formosa
ENSFHEG00000007548pabpc410098.882ENSPLAG00000010112pabpc410098.882Poecilia_latipinna
ENSFHEG00000007548pabpc410098.722ENSPMEG00000019739pabpc410098.722Poecilia_mexicana
ENSFHEG00000007548pabpc410098.882ENSPREG00000001589pabpc410098.882Poecilia_reticulata
ENSFHEG00000007548pabpc49688.571ENSPPYG00000001506PABPC410079.641Pongo_abelii
ENSFHEG00000007548pabpc49388.571ENSPCAG00000003341PABPC410075.000Procavia_capensis
ENSFHEG00000007548pabpc49969.444ENSPCOG00000025882-9969.444Propithecus_coquereli
ENSFHEG00000007548pabpc49688.578ENSPCOG00000023725-10083.281Propithecus_coquereli
ENSFHEG00000007548pabpc49888.221ENSPVAG00000002187PABPC410078.607Pteropus_vampyrus
ENSFHEG00000007548pabpc410096.486ENSPNYG00000006134pabpc49996.486Pundamilia_nyererei
ENSFHEG00000007548pabpc49993.502ENSPNAG00000024355pabpc410093.502Pygocentrus_nattereri
ENSFHEG00000007548pabpc410080.000ENSRNOG00000028592AABR07035074.110079.326Rattus_norvegicus
ENSFHEG00000007548pabpc410082.137ENSRNOG00000015642Pabpc410081.470Rattus_norvegicus
ENSFHEG00000007548pabpc49688.578ENSRBIG00000039761PABPC410083.412Rhinopithecus_bieti
ENSFHEG00000007548pabpc49688.578ENSRROG00000033355PABPC410083.412Rhinopithecus_roxellana
ENSFHEG00000007548pabpc49590.807ENSSBOG00000026193PABPC410083.255Saimiri_boliviensis_boliviensis
ENSFHEG00000007548pabpc49787.640ENSSHAG00000018139PABPC410086.142Sarcophilus_harrisii
ENSFHEG00000007548pabpc49990.523ENSSFOG00015023514pabpc410090.523Scleropages_formosus
ENSFHEG00000007548pabpc410095.694ENSSMAG00000009007pabpc410095.694Scophthalmus_maximus
ENSFHEG00000007548pabpc49996.602ENSSDUG00000012683pabpc49996.006Seriola_dumerili
ENSFHEG00000007548pabpc49996.602ENSSLDG00000013025pabpc49996.006Seriola_lalandi_dorsalis
ENSFHEG00000007548pabpc49387.619ENSSARG00000000310PABPC410073.503Sorex_araneus
ENSFHEG00000007548pabpc49987.122ENSSPUG00000003204PABPC410086.486Sphenodon_punctatus
ENSFHEG00000007548pabpc49996.764ENSSPAG00000009252pabpc49996.326Stegastes_partitus
ENSFHEG00000007548pabpc49391.031ENSSSCG00000003660-10083.412Sus_scrofa
ENSFHEG00000007548pabpc48845.996ENSSSCG00000036170-9645.996Sus_scrofa
ENSFHEG00000007548pabpc49981.682ENSTGUG00000001266PABPC410081.955Taeniopygia_guttata
ENSFHEG00000007548pabpc410094.249ENSTRUG00000005907pabpc49994.249Takifugu_rubripes
ENSFHEG00000007548pabpc410087.220ENSTNIG00000016902pabpc49986.901Tetraodon_nigroviridis
ENSFHEG00000007548pabpc49586.916ENSTBEG00000009035PABPC48486.916Tupaia_belangeri
ENSFHEG00000007548pabpc49286.916ENSTTRG00000014340PABPC48388.571Tursiops_truncatus
ENSFHEG00000007548pabpc49391.031ENSUAMG00000000303PABPC410083.568Ursus_americanus
ENSFHEG00000007548pabpc410089.569ENSUMAG00000019585PABPC49991.807Ursus_maritimus
ENSFHEG00000007548pabpc47870.501ENSVPAG00000010041PABPC47370.501Vicugna_pacos
ENSFHEG00000007548pabpc49391.031ENSVVUG00000005215PABPC410083.568Vulpes_vulpes
ENSFHEG00000007548pabpc46896.429ENSXETG00000027221-10096.429Xenopus_tropicalis
ENSFHEG00000007548pabpc49982.835ENSXETG00000010946pabpc410082.205Xenopus_tropicalis
ENSFHEG00000007548pabpc49995.431ENSXCOG00000013190pabpc49698.113Xiphophorus_couchianus
ENSFHEG00000007548pabpc410098.882ENSXMAG00000019007pabpc410098.882Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us