EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000007565 (Gene tree)
Gene ID: 105923291
Gene Symbol: si:dkey-85a20.4
Alias: -
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 14353 bases
Position: chrKN807334.1:934488-948840
Accession: 105923291
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000006267	SpoU_methylase	PF00588.19	3.9e-21	1	1
ENSFHEP00000025253	SpoU_methylase	PF00588.19	4.3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000005778	-	4026	-	ENSFHEP00000006267	1341 (aa)	-	-
ENSFHET00000005695	-	4446	XM_021314713	ENSFHEP00000025253	1481 (aa)	XP_021170388	-

Gene Model

Click here to download ENSFHEG00000007565's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000007565's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000007565	si:dkey-85a20.4	93	54.596	ENSG00000059588	TARBP1	81	54.596	Homo_sapiens
ENSFHEG00000007565	si:dkey-85a20.4	95	80.769	ENSAPOG00000016419	si:dkey-85a20.4	99	62.786	Acanthochromis_polyacanthus
ENSFHEG00000007565	si:dkey-85a20.4	84	52.707	ENSAMEG00000003359	TARBP1	95	52.707	Ailuropoda_melanoleuca
ENSFHEG00000007565	si:dkey-85a20.4	97	76.712	ENSATEG00000020266	si:dkey-85a20.4	99	61.439	Anabas_testudineus
ENSFHEG00000007565	si:dkey-85a20.4	81	53.846	ENSAPLG00000007666	TARBP1	92	53.846	Anas_platyrhynchos
ENSFHEG00000007565	si:dkey-85a20.4	96	48.148	ENSACAG00000001142	TARBP1	91	48.148	Anolis_carolinensis
ENSFHEG00000007565	si:dkey-85a20.4	83	52.747	ENSANAG00000022031	TARBP1	81	54.213	Aotus_nancymaae
ENSFHEG00000007565	si:dkey-85a20.4	93	54.875	ENSBTAG00000004517	TARBP1	98	51.414	Bos_taurus
ENSFHEG00000007565	si:dkey-85a20.4	94	53.261	ENSCJAG00000018155	TARBP1	99	36.248	Callithrix_jacchus
ENSFHEG00000007565	si:dkey-85a20.4	85	53.561	ENSCAFG00000011533	TARBP1	94	53.561	Canis_familiaris
ENSFHEG00000007565	si:dkey-85a20.4	85	53.561	ENSCAFG00020027141	TARBP1	98	50.259	Canis_lupus_dingo
ENSFHEG00000007565	si:dkey-85a20.4	85	50.513	ENSCHIG00000011437	TARBP1	98	50.513	Capra_hircus
ENSFHEG00000007565	si:dkey-85a20.4	80	51.549	ENSTSYG00000010382	TARBP1	93	51.549	Carlito_syrichta
ENSFHEG00000007565	si:dkey-85a20.4	71	50.140	ENSCAPG00000010831	TARBP1	99	36.019	Cavia_aperea
ENSFHEG00000007565	si:dkey-85a20.4	80	53.678	ENSCPOG00000013995	TARBP1	99	36.000	Cavia_porcellus
ENSFHEG00000007565	si:dkey-85a20.4	79	54.596	ENSCCAG00000037278	TARBP1	81	54.596	Cebus_capucinus
ENSFHEG00000007565	si:dkey-85a20.4	85	53.803	ENSCATG00000011754	TARBP1	92	53.803	Cercocebus_atys
ENSFHEG00000007565	si:dkey-85a20.4	70	53.388	ENSCLAG00000003655	TARBP1	96	38.547	Chinchilla_lanigera
ENSFHEG00000007565	si:dkey-85a20.4	75	53.803	ENSCSAG00000010100	TARBP1	91	53.803	Chlorocebus_sabaeus
ENSFHEG00000007565	si:dkey-85a20.4	92	48.450	ENSCPBG00000005587	TARBP1	96	44.147	Chrysemys_picta_bellii
ENSFHEG00000007565	si:dkey-85a20.4	81	53.022	ENSCANG00000034343	TARBP1	91	53.022	Colobus_angolensis_palliatus
ENSFHEG00000007565	si:dkey-85a20.4	97	53.333	ENSCGRG00001016690	Tarbp1	99	37.131	Cricetulus_griseus_chok1gshd
ENSFHEG00000007565	si:dkey-85a20.4	80	53.333	ENSCGRG00000016893	Tarbp1	94	39.347	Cricetulus_griseus_crigri
ENSFHEG00000007565	si:dkey-85a20.4	99	58.264	ENSCSEG00000005255	si:dkey-85a20.4	100	58.137	Cynoglossus_semilaevis
ENSFHEG00000007565	si:dkey-85a20.4	99	63.228	ENSDARG00000079055	si:dkey-85a20.4	97	63.228	Danio_rerio
ENSFHEG00000007565	si:dkey-85a20.4	94	55.125	ENSDNOG00000008637	TARBP1	96	51.813	Dasypus_novemcinctus
ENSFHEG00000007565	si:dkey-85a20.4	79	50.392	ENSDORG00000007984	Tarbp1	95	51.042	Dipodomys_ordii
ENSFHEG00000007565	si:dkey-85a20.4	95	53.482	ENSEASG00005000252	TARBP1	99	37.171	Equus_asinus_asinus
ENSFHEG00000007565	si:dkey-85a20.4	93	53.482	ENSECAG00000023673	TARBP1	99	38.546	Equus_caballus
ENSFHEG00000007565	si:dkey-85a20.4	94	69.067	ENSELUG00000012193	si:dkey-85a20.4	99	53.565	Esox_lucius
ENSFHEG00000007565	si:dkey-85a20.4	79	52.958	ENSFCAG00000014183	TARBP1	99	34.814	Felis_catus
ENSFHEG00000007565	si:dkey-85a20.4	70	54.108	ENSFALG00000013565	TARBP1	99	38.583	Ficedula_albicollis
ENSFHEG00000007565	si:dkey-85a20.4	69	50.649	ENSFDAG00000001308	TARBP1	99	37.007	Fukomys_damarensis
ENSFHEG00000007565	si:dkey-85a20.4	85	65.842	ENSGMOG00000004549	si:dkey-85a20.4	95	65.842	Gadus_morhua
ENSFHEG00000007565	si:dkey-85a20.4	75	52.958	ENSGALG00000011000	TARBP1	99	37.053	Gallus_gallus
ENSFHEG00000007565	si:dkey-85a20.4	98	80.488	ENSGAFG00000007387	si:dkey-85a20.4	95	77.519	Gambusia_affinis
ENSFHEG00000007565	si:dkey-85a20.4	80	76.596	ENSGACG00000005865	si:dkey-85a20.4	82	76.596	Gasterosteus_aculeatus
ENSFHEG00000007565	si:dkey-85a20.4	84	51.531	ENSGAGG00000012102	TARBP1	88	51.531	Gopherus_agassizii
ENSFHEG00000007565	si:dkey-85a20.4	76	49.865	ENSGGOG00000022879	TARBP1	99	37.958	Gorilla_gorilla
ENSFHEG00000007565	si:dkey-85a20.4	97	77.202	ENSHBUG00000008877	si:dkey-85a20.4	100	62.838	Haplochromis_burtoni
ENSFHEG00000007565	si:dkey-85a20.4	77	53.933	ENSHGLG00000011592	TARBP1	99	35.693	Heterocephalus_glaber_female
ENSFHEG00000007565	si:dkey-85a20.4	80	54.902	ENSHGLG00100015169	TARBP1	98	37.952	Heterocephalus_glaber_male
ENSFHEG00000007565	si:dkey-85a20.4	97	62.198	ENSIPUG00000005249	si:dkey-85a20.4	92	62.198	Ictalurus_punctatus
ENSFHEG00000007565	si:dkey-85a20.4	73	53.611	ENSSTOG00000032291	TARBP1	96	39.560	Ictidomys_tridecemlineatus
ENSFHEG00000007565	si:dkey-85a20.4	87	49.616	ENSJJAG00000017840	Tarbp1	96	49.616	Jaculus_jaculus
ENSFHEG00000007565	si:dkey-85a20.4	98	81.894	ENSKMAG00000017546	si:dkey-85a20.4	86	81.894	Kryptolebias_marmoratus
ENSFHEG00000007565	si:dkey-85a20.4	95	71.429	ENSLBEG00000012132	si:dkey-85a20.4	94	71.429	Labrus_bergylta
ENSFHEG00000007565	si:dkey-85a20.4	95	55.337	ENSLACG00000004337	TARBP1	81	55.337	Latimeria_chalumnae
ENSFHEG00000007565	si:dkey-85a20.4	99	61.680	ENSLOCG00000016214	si:dkey-85a20.4	96	61.680	Lepisosteus_oculatus
ENSFHEG00000007565	si:dkey-85a20.4	77	55.307	ENSLAFG00000011394	TARBP1	98	51.948	Loxodonta_africana
ENSFHEG00000007565	si:dkey-85a20.4	79	54.596	ENSMFAG00000041068	TARBP1	80	54.596	Macaca_fascicularis
ENSFHEG00000007565	si:dkey-85a20.4	79	54.596	ENSMMUG00000021703	TARBP1	81	54.596	Macaca_mulatta
ENSFHEG00000007565	si:dkey-85a20.4	79	54.596	ENSMNEG00000045002	TARBP1	81	54.596	Macaca_nemestrina
ENSFHEG00000007565	si:dkey-85a20.4	80	53.803	ENSMLEG00000044182	TARBP1	91	53.803	Mandrillus_leucophaeus
ENSFHEG00000007565	si:dkey-85a20.4	95	76.986	ENSMAMG00000021760	si:dkey-85a20.4	81	76.986	Mastacembelus_armatus
ENSFHEG00000007565	si:dkey-85a20.4	97	76.943	ENSMZEG00005005751	si:dkey-85a20.4	100	62.776	Maylandia_zebra
ENSFHEG00000007565	si:dkey-85a20.4	97	53.889	ENSMAUG00000020968	Tarbp1	99	37.477	Mesocricetus_auratus
ENSFHEG00000007565	si:dkey-85a20.4	89	45.042	ENSMICG00000015280	TARBP1	96	45.299	Microcebus_murinus
ENSFHEG00000007565	si:dkey-85a20.4	77	55.000	ENSMOCG00000004128	Tarbp1	99	36.632	Microtus_ochrogaster
ENSFHEG00000007565	si:dkey-85a20.4	98	74.339	ENSMMOG00000007795	si:dkey-85a20.4	95	74.339	Mola_mola
ENSFHEG00000007565	si:dkey-85a20.4	93	55.775	ENSMODG00000008504	TARBP1	94	55.271	Monodelphis_domestica
ENSFHEG00000007565	si:dkey-85a20.4	94	76.554	ENSMALG00000002916	si:dkey-85a20.4	99	58.880	Monopterus_albus
ENSFHEG00000007565	si:dkey-85a20.4	95	54.167	MGP_CAROLIEiJ_G0031729	Tarbp1	92	49.518	Mus_caroli
ENSFHEG00000007565	si:dkey-85a20.4	78	54.444	ENSMUSG00000090290	Tarbp1	99	37.012	Mus_musculus
ENSFHEG00000007565	si:dkey-85a20.4	94	55.000	MGP_PahariEiJ_G0023326	Tarbp1	99	37.616	Mus_pahari
ENSFHEG00000007565	si:dkey-85a20.4	78	54.167	MGP_SPRETEiJ_G0032846	Tarbp1	99	37.074	Mus_spretus
ENSFHEG00000007565	si:dkey-85a20.4	76	53.409	ENSMPUG00000002802	TARBP1	95	53.409	Mustela_putorius_furo
ENSFHEG00000007565	si:dkey-85a20.4	83	48.187	ENSMLUG00000002414	TARBP1	97	48.187	Myotis_lucifugus
ENSFHEG00000007565	si:dkey-85a20.4	76	54.596	ENSNLEG00000002518	TARBP1	81	54.875	Nomascus_leucogenys
ENSFHEG00000007565	si:dkey-85a20.4	61	54.596	ENSMEUG00000011370	-	58	54.416	Notamacropus_eugenii
ENSFHEG00000007565	si:dkey-85a20.4	68	50.000	ENSOPRG00000013822	TARBP1	67	50.000	Ochotona_princeps
ENSFHEG00000007565	si:dkey-85a20.4	77	55.402	ENSODEG00000005238	TARBP1	90	37.994	Octodon_degus
ENSFHEG00000007565	si:dkey-85a20.4	80	78.684	ENSONIG00000009789	si:dkey-85a20.4	99	63.203	Oreochromis_niloticus
ENSFHEG00000007565	si:dkey-85a20.4	80	50.811	ENSOCUG00000017418	TARBP1	99	35.615	Oryctolagus_cuniculus
ENSFHEG00000007565	si:dkey-85a20.4	95	74.255	ENSORLG00000010529	si:dkey-85a20.4	99	60.356	Oryzias_latipes
ENSFHEG00000007565	si:dkey-85a20.4	95	74.255	ENSORLG00020019264	si:dkey-85a20.4	99	60.604	Oryzias_latipes_hni
ENSFHEG00000007565	si:dkey-85a20.4	99	71.247	ENSORLG00015003276	si:dkey-85a20.4	96	71.247	Oryzias_latipes_hsok
ENSFHEG00000007565	si:dkey-85a20.4	83	47.619	ENSOGAG00000002379	TARBP1	96	47.619	Otolemur_garnettii
ENSFHEG00000007565	si:dkey-85a20.4	85	54.494	ENSOARG00000003434	TARBP1	89	54.494	Ovis_aries
ENSFHEG00000007565	si:dkey-85a20.4	75	54.076	ENSPPAG00000028097	TARBP1	99	38.761	Pan_paniscus
ENSFHEG00000007565	si:dkey-85a20.4	71	52.958	ENSPPRG00000013561	TARBP1	88	38.612	Panthera_pardus
ENSFHEG00000007565	si:dkey-85a20.4	76	52.958	ENSPTIG00000009281	TARBP1	99	37.482	Panthera_tigris_altaica
ENSFHEG00000007565	si:dkey-85a20.4	76	54.875	ENSPTRG00000002124	TARBP1	81	54.875	Pan_troglodytes
ENSFHEG00000007565	si:dkey-85a20.4	76	54.318	ENSPANG00000021933	TARBP1	81	54.318	Papio_anubis
ENSFHEG00000007565	si:dkey-85a20.4	99	63.846	ENSPKIG00000016716	si:dkey-85a20.4	95	63.846	Paramormyrops_kingsleyae
ENSFHEG00000007565	si:dkey-85a20.4	77	55.840	ENSPSIG00000010699	TARBP1	92	55.840	Pelodiscus_sinensis
ENSFHEG00000007565	si:dkey-85a20.4	77	54.444	ENSPEMG00000006888	Tarbp1	92	39.334	Peromyscus_maniculatus_bairdii
ENSFHEG00000007565	si:dkey-85a20.4	83	60.680	ENSPCIG00000029710	TARBP1	91	63.077	Phascolarctos_cinereus
ENSFHEG00000007565	si:dkey-85a20.4	80	81.183	ENSPFOG00000013020	si:dkey-85a20.4	99	69.565	Poecilia_formosa
ENSFHEG00000007565	si:dkey-85a20.4	99	80.533	ENSPLAG00000006044	si:dkey-85a20.4	100	69.840	Poecilia_latipinna
ENSFHEG00000007565	si:dkey-85a20.4	99	81.067	ENSPMEG00000017857	si:dkey-85a20.4	100	69.779	Poecilia_mexicana
ENSFHEG00000007565	si:dkey-85a20.4	99	79.625	ENSPREG00000022753	si:dkey-85a20.4	99	69.576	Poecilia_reticulata
ENSFHEG00000007565	si:dkey-85a20.4	67	54.521	ENSPPYG00000000102	TARBP1	99	36.183	Pongo_abelii
ENSFHEG00000007565	si:dkey-85a20.4	68	73.485	ENSPCAG00000004808	TARBP1	70	73.485	Procavia_capensis
ENSFHEG00000007565	si:dkey-85a20.4	77	53.740	ENSPCOG00000005666	TARBP1	85	53.740	Propithecus_coquereli
ENSFHEG00000007565	si:dkey-85a20.4	82	53.287	ENSPVAG00000014798	TARBP1	94	51.438	Pteropus_vampyrus
ENSFHEG00000007565	si:dkey-85a20.4	97	77.807	ENSPNYG00000019135	si:dkey-85a20.4	86	77.807	Pundamilia_nyererei
ENSFHEG00000007565	si:dkey-85a20.4	95	53.994	ENSRNOG00000053574	Tarbp1	99	36.620	Rattus_norvegicus
ENSFHEG00000007565	si:dkey-85a20.4	77	53.804	ENSRBIG00000043362	TARBP1	95	35.794	Rhinopithecus_bieti
ENSFHEG00000007565	si:dkey-85a20.4	77	53.804	ENSRROG00000029527	TARBP1	90	37.744	Rhinopithecus_roxellana
ENSFHEG00000007565	si:dkey-85a20.4	81	53.521	ENSSBOG00000034503	TARBP1	89	53.803	Saimiri_boliviensis_boliviensis
ENSFHEG00000007565	si:dkey-85a20.4	83	51.515	ENSSHAG00000000013	TARBP1	95	51.515	Sarcophilus_harrisii
ENSFHEG00000007565	si:dkey-85a20.4	95	67.380	ENSSFOG00015002660	si:dkey-85a20.4	91	65.087	Scleropages_formosus
ENSFHEG00000007565	si:dkey-85a20.4	98	78.919	ENSSMAG00000007081	si:dkey-85a20.4	84	79.189	Scophthalmus_maximus
ENSFHEG00000007565	si:dkey-85a20.4	99	65.938	ENSSDUG00000023566	si:dkey-85a20.4	99	66.131	Seriola_dumerili
ENSFHEG00000007565	si:dkey-85a20.4	97	79.224	ENSSLDG00000020200	si:dkey-85a20.4	100	63.592	Seriola_lalandi_dorsalis
ENSFHEG00000007565	si:dkey-85a20.4	74	54.520	ENSSARG00000012207	TARBP1	71	54.520	Sorex_araneus
ENSFHEG00000007565	si:dkey-85a20.4	98	53.846	ENSSPUG00000015364	TARBP1	93	53.846	Sphenodon_punctatus
ENSFHEG00000007565	si:dkey-85a20.4	97	80.769	ENSSPAG00000007213	si:dkey-85a20.4	84	80.769	Stegastes_partitus
ENSFHEG00000007565	si:dkey-85a20.4	99	54.144	ENSSSCG00000010160	TARBP1	97	54.144	Sus_scrofa
ENSFHEG00000007565	si:dkey-85a20.4	70	53.782	ENSTGUG00000010214	TARBP1	100	39.364	Taeniopygia_guttata
ENSFHEG00000007565	si:dkey-85a20.4	92	73.913	ENSTNIG00000016586	si:dkey-85a20.4	91	73.913	Tetraodon_nigroviridis
ENSFHEG00000007565	si:dkey-85a20.4	79	44.728	ENSTTRG00000008707	TARBP1	82	44.728	Tursiops_truncatus
ENSFHEG00000007565	si:dkey-85a20.4	81	53.125	ENSUMAG00000006730	TARBP1	94	53.125	Ursus_maritimus
ENSFHEG00000007565	si:dkey-85a20.4	65	74.468	ENSVPAG00000007665	TARBP1	71	74.468	Vicugna_pacos
ENSFHEG00000007565	si:dkey-85a20.4	84	53.561	ENSVVUG00000007460	TARBP1	95	53.561	Vulpes_vulpes
ENSFHEG00000007565	si:dkey-85a20.4	81	51.124	ENSXETG00000016224	tarbp1	92	51.124	Xenopus_tropicalis
ENSFHEG00000007565	si:dkey-85a20.4	84	80.453	ENSXCOG00000011779	si:dkey-85a20.4	84	80.453	Xiphophorus_couchianus
ENSFHEG00000007565	si:dkey-85a20.4	62	76.807	ENSXMAG00000009600	si:dkey-85a20.4	100	64.252	Xiphophorus_maculatus