EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000007634 (Gene tree)
Gene ID: 105937992
Gene Symbol: scaf4b
Alias: im:6900467|si:ch211-245g11.2
Full Name: splicing factor%2C arginine/serine-rich 15-like
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 44388 bases
Position: chrKN811530.1:627776-672163
Accession: 105937992
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000025432	RRM_1	PF00076.22	1.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000005241	-	3179	XM_012879582	ENSFHEP00000025432	752 (aa)	XP_012735036	UPI0006451182

Gene Model

Click here to download ENSFHEG00000007634's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000007634's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000007634	scaf4b	55	71.519	ENSG00000156304	SCAF4	59	58.696	Homo_sapiens
ENSFHEG00000007634	scaf4b	100	71.711	ENSAPOG00000019615	scaf4b	100	73.553	Acanthochromis_polyacanthus
ENSFHEG00000007634	scaf4b	100	74.538	ENSAOCG00000010433	scaf4b	100	74.538	Amphiprion_ocellaris
ENSFHEG00000007634	scaf4b	100	74.406	ENSAPEG00000010913	scaf4b	100	74.406	Amphiprion_percula
ENSFHEG00000007634	scaf4b	98	68.267	ENSATEG00000011758	scaf4b	100	68.400	Anabas_testudineus
ENSFHEG00000007634	scaf4b	100	71.070	ENSACLG00000024833	scaf4b	100	71.598	Astatotilapia_calliptera
ENSFHEG00000007634	scaf4b	55	71.519	ENSCJAG00000008993	SCAF4	67	58.696	Callithrix_jacchus
ENSFHEG00000007634	scaf4b	53	72.152	ENSCAFG00020026019	SCAF4	69	56.089	Canis_lupus_dingo
ENSFHEG00000007634	scaf4b	53	71.519	ENSTSYG00000011344	SCAF4	53	56.981	Carlito_syrichta
ENSFHEG00000007634	scaf4b	55	72.152	ENSCPOG00000012443	SCAF4	58	59.636	Cavia_porcellus
ENSFHEG00000007634	scaf4b	55	71.519	ENSCCAG00000033727	SCAF4	50	57.519	Cebus_capucinus
ENSFHEG00000007634	scaf4b	100	59.869	ENSCSEG00000012808	-	99	61.206	Cynoglossus_semilaevis
ENSFHEG00000007634	scaf4b	60	75.177	ENSCSEG00000019549	scaf4a	62	50.915	Cynoglossus_semilaevis
ENSFHEG00000007634	scaf4b	100	80.871	ENSCVAG00000009142	scaf4b	100	80.079	Cyprinodon_variegatus
ENSFHEG00000007634	scaf4b	52	70.000	ENSDARG00000018854	scaf4b	57	70.470	Danio_rerio
ENSFHEG00000007634	scaf4b	50	77.311	ENSETEG00000000583	SCAF4	52	44.300	Echinops_telfairi
ENSFHEG00000007634	scaf4b	60	50.871	ENSEBUG00000003891	SCAF8	66	51.711	Eptatretus_burgeri
ENSFHEG00000007634	scaf4b	53	68.707	ENSGMOG00000015188	scaf4a	54	58.687	Gadus_morhua
ENSFHEG00000007634	scaf4b	55	71.329	ENSGACG00000020580	scaf4a	64	58.427	Gasterosteus_aculeatus
ENSFHEG00000007634	scaf4b	55	71.519	ENSGGOG00000015557	SCAF4	54	58.696	Gorilla_gorilla
ENSFHEG00000007634	scaf4b	53	76.923	ENSIPUG00000011285	scaf4	64	59.489	Ictalurus_punctatus
ENSFHEG00000007634	scaf4b	51	79.137	ENSJJAG00000019447	Scaf4	57	55.253	Jaculus_jaculus
ENSFHEG00000007634	scaf4b	100	75.826	ENSKMAG00000005742	scaf4b	100	75.826	Kryptolebias_marmoratus
ENSFHEG00000007634	scaf4b	66	54.435	ENSLACG00000013913	SCAF4	60	55.242	Latimeria_chalumnae
ENSFHEG00000007634	scaf4b	78	60.920	ENSLOCG00000009162	scaf4a	67	55.247	Lepisosteus_oculatus
ENSFHEG00000007634	scaf4b	62	71.698	ENSLAFG00000010710	SCAF4	56	51.754	Loxodonta_africana
ENSFHEG00000007634	scaf4b	52	75.887	ENSMZEG00005024349	scaf4a	59	56.159	Maylandia_zebra
ENSFHEG00000007634	scaf4b	54	70.886	ENSMODG00000021040	SCAF4	51	59.124	Monodelphis_domestica
ENSFHEG00000007634	scaf4b	58	59.893	ENSMALG00000013825	scaf4a	62	58.015	Monopterus_albus
ENSFHEG00000007634	scaf4b	52	79.137	MGP_CAROLIEiJ_G0020944	Scaf4	55	60.075	Mus_caroli
ENSFHEG00000007634	scaf4b	55	73.418	ENSMUSG00000022983	Scaf4	55	60.075	Mus_musculus
ENSFHEG00000007634	scaf4b	52	79.137	MGP_PahariEiJ_G0016649	Scaf4	55	60.448	Mus_pahari
ENSFHEG00000007634	scaf4b	52	79.137	MGP_SPRETEiJ_G0021850	Scaf4	55	60.075	Mus_spretus
ENSFHEG00000007634	scaf4b	52	75.177	ENSONIG00000004687	scaf4a	63	56.522	Oreochromis_niloticus
ENSFHEG00000007634	scaf4b	71	61.950	ENSONIG00000005610	scaf4b	99	58.991	Oreochromis_niloticus
ENSFHEG00000007634	scaf4b	52	77.698	ENSOCUG00000008336	SCAF4	59	60.000	Oryctolagus_cuniculus
ENSFHEG00000007634	scaf4b	100	65.563	ENSORLG00000003420	scaf4b	100	65.079	Oryzias_latipes
ENSFHEG00000007634	scaf4b	100	66.402	ENSORLG00020013853	scaf4b	100	65.918	Oryzias_latipes_hni
ENSFHEG00000007634	scaf4b	53	72.152	ENSPTIG00000021578	SCAF4	50	58.271	Panthera_tigris_altaica
ENSFHEG00000007634	scaf4b	59	64.322	ENSPKIG00000022408	scaf4a	69	62.162	Paramormyrops_kingsleyae
ENSFHEG00000007634	scaf4b	56	57.447	ENSPMAG00000006192	SCAF8	63	56.129	Petromyzon_marinus
ENSFHEG00000007634	scaf4b	53	70.886	ENSPCIG00000028183	SCAF4	56	58.113	Phascolarctos_cinereus
ENSFHEG00000007634	scaf4b	83	75.368	ENSPFOG00000003261	scaf4b	79	74.265	Poecilia_formosa
ENSFHEG00000007634	scaf4b	76	55.872	ENSPFOG00000017156	scaf4a	66	55.556	Poecilia_formosa
ENSFHEG00000007634	scaf4b	100	77.707	ENSPLAG00000004403	-	100	77.580	Poecilia_latipinna
ENSFHEG00000007634	scaf4b	100	78.089	ENSPMEG00000006666	-	100	77.962	Poecilia_mexicana
ENSFHEG00000007634	scaf4b	100	77.863	ENSPREG00000013510	scaf4b	100	77.735	Poecilia_reticulata
ENSFHEG00000007634	scaf4b	55	71.519	ENSPCOG00000018710	SCAF4	59	56.981	Propithecus_coquereli
ENSFHEG00000007634	scaf4b	100	71.202	ENSPNYG00000010526	scaf4b	100	71.731	Pundamilia_nyererei
ENSFHEG00000007634	scaf4b	97	74.468	ENSPNAG00000015199	-	73	77.037	Pygocentrus_nattereri
ENSFHEG00000007634	scaf4b	52	79.137	ENSRNOG00000002104	Scaf4	55	61.194	Rattus_norvegicus
ENSFHEG00000007634	scaf4b	54	70.886	ENSSHAG00000001581	SCAF4	52	57.692	Sarcophilus_harrisii
ENSFHEG00000007634	scaf4b	100	69.895	ENSSMAG00000003738	scaf4b	100	69.634	Scophthalmus_maximus
ENSFHEG00000007634	scaf4b	100	72.120	ENSSDUG00000012380	scaf4b	100	71.859	Seriola_dumerili
ENSFHEG00000007634	scaf4b	100	72.120	ENSSLDG00000023152	-	100	71.859	Seriola_lalandi_dorsalis
ENSFHEG00000007634	scaf4b	55	72.152	ENSSSCG00000021023	SCAF4	59	60.145	Sus_scrofa
ENSFHEG00000007634	scaf4b	64	58.672	ENSTGUG00000013464	SCAF4	63	58.868	Taeniopygia_guttata
ENSFHEG00000007634	scaf4b	100	57.713	ENSTRUG00000009536	-	100	57.580	Takifugu_rubripes
ENSFHEG00000007634	scaf4b	52	78.417	ENSUAMG00000008860	SCAF4	60	59.058	Ursus_americanus
ENSFHEG00000007634	scaf4b	50	78.417	ENSUMAG00000016962	SCAF4	50	59.524	Ursus_maritimus