EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000007902 (Gene tree)
Gene ID: 105916143
Gene Symbol: -
Alias: -
Full Name: transcription activator BRG1
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 24794 bases
Position: chrKN805691.1:168398-193191
Accession: 105916143
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000006689	ResIII	PF04851.15	1.7e-08	1	1
ENSFHEP00000025540	ResIII	PF04851.15	1.9e-08	1	1
ENSFHEP00000025540	BRK	PF07533.16	6.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000005018	-	7896	XM_012850492	ENSFHEP00000025540	1666 (aa)	XP_012705946	A0A146YR48
ENSFHET00000005069	-	4734	-	ENSFHEP00000006689	1577 (aa)	-	-

Gene Model

Click here to download ENSFHEG00000007902's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000007902's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000007902	-	99	70.610	ENSFHEG00000021250	SMARCA2	95	70.866
ENSFHEG00000007902	-	97	80.797	ENSFHEG00000010182	smarca4a	100	83.601

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000007902	-	98	84.972	ENSG00000127616	SMARCA4	99	95.652	Homo_sapiens
ENSFHEG00000007902	-	76	86.591	ENSAPOG00000003509	smarca4a	98	87.071	Acanthochromis_polyacanthus
ENSFHEG00000007902	-	97	95.623	ENSAPOG00000004542	SMARCA4	99	95.623	Acanthochromis_polyacanthus
ENSFHEG00000007902	-	99	81.329	ENSAMEG00000010868	SMARCA4	100	81.477	Ailuropoda_melanoleuca
ENSFHEG00000007902	-	99	84.508	ENSACIG00000021550	smarca4a	98	85.749	Amphilophus_citrinellus
ENSFHEG00000007902	-	96	90.399	ENSACIG00000003035	-	99	90.593	Amphilophus_citrinellus
ENSFHEG00000007902	-	88	83.808	ENSAOCG00000019167	smarca4a	100	83.564	Amphiprion_ocellaris
ENSFHEG00000007902	-	93	93.613	ENSAOCG00000009450	-	97	93.613	Amphiprion_ocellaris
ENSFHEG00000007902	-	100	95.417	ENSAPEG00000023108	-	100	95.417	Amphiprion_percula
ENSFHEG00000007902	-	88	83.878	ENSAPEG00000015559	smarca4a	100	83.634	Amphiprion_percula
ENSFHEG00000007902	-	99	93.629	ENSATEG00000001094	-	98	93.871	Anabas_testudineus
ENSFHEG00000007902	-	99	84.721	ENSATEG00000011524	smarca4a	100	85.117	Anabas_testudineus
ENSFHEG00000007902	-	98	84.740	ENSANAG00000036991	SMARCA4	100	81.441	Aotus_nancymaae
ENSFHEG00000007902	-	95	95.217	ENSACLG00000008638	-	98	95.280	Astatotilapia_calliptera
ENSFHEG00000007902	-	98	85.894	ENSACLG00000000163	smarca4a	99	85.222	Astatotilapia_calliptera
ENSFHEG00000007902	-	93	86.367	ENSAMXG00000011238	-	96	89.774	Astyanax_mexicanus
ENSFHEG00000007902	-	97	81.621	ENSAMXG00000021023	smarca4a	99	83.620	Astyanax_mexicanus
ENSFHEG00000007902	-	98	84.875	ENSBTAG00000019220	SMARCA4	100	84.189	Bos_taurus
ENSFHEG00000007902	-	97	86.667	ENSCJAG00000005936	SMARCA4	95	87.094	Callithrix_jacchus
ENSFHEG00000007902	-	98	84.847	ENSCAFG00000017584	SMARCA4	100	84.386	Canis_familiaris
ENSFHEG00000007902	-	99	83.881	ENSCAFG00020024620	SMARCA4	99	84.386	Canis_lupus_dingo
ENSFHEG00000007902	-	98	81.149	ENSCHIG00000015318	SMARCA4	100	80.691	Capra_hircus
ENSFHEG00000007902	-	98	84.875	ENSTSYG00000012966	SMARCA4	100	84.295	Carlito_syrichta
ENSFHEG00000007902	-	93	79.388	ENSCAPG00000015932	SMARCA4	95	89.673	Cavia_aperea
ENSFHEG00000007902	-	99	84.039	ENSCPOG00000015549	SMARCA4	100	84.267	Cavia_porcellus
ENSFHEG00000007902	-	98	81.976	ENSCCAG00000031660	SMARCA4	99	81.554	Cebus_capucinus
ENSFHEG00000007902	-	98	85.009	ENSCATG00000029530	SMARCA4	100	84.267	Cercocebus_atys
ENSFHEG00000007902	-	98	85.025	ENSCLAG00000011946	SMARCA4	100	83.929	Chinchilla_lanigera
ENSFHEG00000007902	-	98	84.909	ENSCPBG00000009994	SMARCA4	100	84.000	Chrysemys_picta_bellii
ENSFHEG00000007902	-	98	84.947	ENSCANG00000036013	SMARCA4	100	84.267	Colobus_angolensis_palliatus
ENSFHEG00000007902	-	99	83.761	ENSCGRG00001016732	Smarca4	100	84.048	Cricetulus_griseus_chok1gshd
ENSFHEG00000007902	-	99	83.761	ENSCGRG00000017242	Smarca4	100	84.048	Cricetulus_griseus_crigri
ENSFHEG00000007902	-	96	83.458	ENSCSEG00000014771	smarca4a	100	84.602	Cynoglossus_semilaevis
ENSFHEG00000007902	-	99	93.354	ENSCVAG00000003018	-	99	93.354	Cyprinodon_variegatus
ENSFHEG00000007902	-	98	83.251	ENSCVAG00000006979	smarca4a	99	84.453	Cyprinodon_variegatus
ENSFHEG00000007902	-	99	85.321	ENSDARG00000077226	smarca4a	100	85.194	Danio_rerio
ENSFHEG00000007902	-	93	83.397	ENSDARG00000104339	SMARCA4	94	84.655	Danio_rerio
ENSFHEG00000007902	-	98	77.041	ENSDNOG00000048847	SMARCA4	90	89.903	Dasypus_novemcinctus
ENSFHEG00000007902	-	86	79.054	ENSDORG00000002544	Smarca4	91	79.901	Dipodomys_ordii
ENSFHEG00000007902	-	94	73.404	ENSETEG00000013361	SMARCA4	94	73.970	Echinops_telfairi
ENSFHEG00000007902	-	98	84.822	ENSEASG00005006167	SMARCA4	100	82.312	Equus_asinus_asinus
ENSFHEG00000007902	-	99	83.978	ENSECAG00000008334	SMARCA4	100	84.148	Equus_caballus
ENSFHEG00000007902	-	98	83.250	ENSELUG00000010247	smarca4a	100	83.194	Esox_lucius
ENSFHEG00000007902	-	98	82.150	ENSELUG00000023232	-	94	85.021	Esox_lucius
ENSFHEG00000007902	-	99	83.850	ENSFCAG00000004894	SMARCA4	100	84.295	Felis_catus
ENSFHEG00000007902	-	92	81.303	ENSFALG00000004208	SMARCA4	95	82.003	Ficedula_albicollis
ENSFHEG00000007902	-	91	85.003	ENSFDAG00000012237	SMARCA4	97	84.734	Fukomys_damarensis
ENSFHEG00000007902	-	93	84.979	ENSGMOG00000005756	-	86	85.185	Gadus_morhua
ENSFHEG00000007902	-	91	80.719	ENSGMOG00000002649	smarca4a	90	83.433	Gadus_morhua
ENSFHEG00000007902	-	72	83.658	ENSGALG00000047145	SMARCA4	100	83.207	Gallus_gallus
ENSFHEG00000007902	-	87	87.868	ENSGAFG00000014900	smarca4a	97	88.280	Gambusia_affinis
ENSFHEG00000007902	-	99	93.325	ENSGAFG00000008827	-	100	91.667	Gambusia_affinis
ENSFHEG00000007902	-	97	83.354	ENSGACG00000006691	smarca4a	100	82.777	Gasterosteus_aculeatus
ENSFHEG00000007902	-	99	85.773	ENSGACG00000016033	-	100	85.406	Gasterosteus_aculeatus
ENSFHEG00000007902	-	98	85.006	ENSGAGG00000016757	SMARCA4	100	84.091	Gopherus_agassizii
ENSFHEG00000007902	-	98	85.009	ENSGGOG00000009882	SMARCA4	100	84.267	Gorilla_gorilla
ENSFHEG00000007902	-	100	94.967	ENSHBUG00000005447	-	100	95.147	Haplochromis_burtoni
ENSFHEG00000007902	-	98	85.903	ENSHBUG00000021172	smarca4a	100	85.595	Haplochromis_burtoni
ENSFHEG00000007902	-	99	83.532	ENSHGLG00000010519	SMARCA4	100	84.135	Heterocephalus_glaber_female
ENSFHEG00000007902	-	99	83.313	ENSHGLG00100013774	SMARCA4	100	83.660	Heterocephalus_glaber_male
ENSFHEG00000007902	-	94	84.650	ENSHCOG00000009510	smarca4a	96	85.320	Hippocampus_comes
ENSFHEG00000007902	-	98	84.114	ENSIPUG00000016346	-	97	85.309	Ictalurus_punctatus
ENSFHEG00000007902	-	99	85.492	ENSIPUG00000006107	smarca4a	100	85.671	Ictalurus_punctatus
ENSFHEG00000007902	-	99	84.000	ENSSTOG00000007939	SMARCA4	100	84.267	Ictidomys_tridecemlineatus
ENSFHEG00000007902	-	99	82.353	ENSJJAG00000012877	Smarca4	100	83.030	Jaculus_jaculus
ENSFHEG00000007902	-	100	96.826	ENSKMAG00000019518	-	100	96.826	Kryptolebias_marmoratus
ENSFHEG00000007902	-	98	84.470	ENSKMAG00000011931	smarca4a	100	84.510	Kryptolebias_marmoratus
ENSFHEG00000007902	-	95	82.453	ENSLBEG00000017383	smarca4a	97	82.143	Labrus_bergylta
ENSFHEG00000007902	-	84	86.395	ENSLBEG00000020655	-	98	87.092	Labrus_bergylta
ENSFHEG00000007902	-	53	76.923	ENSLACG00000015309	SMARCA4	100	76.429	Latimeria_chalumnae
ENSFHEG00000007902	-	98	82.707	ENSLOCG00000007820	smarca4a	99	81.339	Lepisosteus_oculatus
ENSFHEG00000007902	-	99	83.790	ENSLAFG00000001433	SMARCA4	100	84.236	Loxodonta_africana
ENSFHEG00000007902	-	98	85.009	ENSMFAG00000032146	SMARCA4	99	84.267	Macaca_fascicularis
ENSFHEG00000007902	-	98	85.009	ENSMMUG00000012042	SMARCA4	99	89.029	Macaca_mulatta
ENSFHEG00000007902	-	98	84.938	ENSMNEG00000028512	SMARCA4	100	84.349	Macaca_nemestrina
ENSFHEG00000007902	-	98	84.611	ENSMLEG00000034976	SMARCA4	100	84.057	Mandrillus_leucophaeus
ENSFHEG00000007902	-	100	94.388	ENSMAMG00000002841	-	100	94.448	Mastacembelus_armatus
ENSFHEG00000007902	-	97	86.200	ENSMAMG00000009256	smarca4a	100	85.269	Mastacembelus_armatus
ENSFHEG00000007902	-	98	85.894	ENSMZEG00005003889	smarca4a	100	85.484	Maylandia_zebra
ENSFHEG00000007902	-	95	95.082	ENSMZEG00005023861	-	98	95.145	Maylandia_zebra
ENSFHEG00000007902	-	99	83.790	ENSMAUG00000020731	Smarca4	100	83.907	Mesocricetus_auratus
ENSFHEG00000007902	-	98	84.850	ENSMICG00000009806	SMARCA4	100	84.295	Microcebus_murinus
ENSFHEG00000007902	-	98	84.289	ENSMOCG00000022209	Smarca4	100	83.779	Microtus_ochrogaster
ENSFHEG00000007902	-	99	90.146	ENSMMOG00000008466	-	100	89.828	Mola_mola
ENSFHEG00000007902	-	95	83.091	ENSMMOG00000007571	smarca4a	98	84.698	Mola_mola
ENSFHEG00000007902	-	99	83.029	ENSMODG00000006287	SMARCA4	100	83.088	Monodelphis_domestica
ENSFHEG00000007902	-	90	86.765	ENSMALG00000021534	-	99	87.953	Monopterus_albus
ENSFHEG00000007902	-	97	82.561	ENSMALG00000003388	smarca4a	100	84.836	Monopterus_albus
ENSFHEG00000007902	-	99	83.642	MGP_CAROLIEiJ_G0031879	Smarca4	100	86.881	Mus_caroli
ENSFHEG00000007902	-	99	83.642	ENSMUSG00000032187	Smarca4	99	86.881	Mus_musculus
ENSFHEG00000007902	-	99	83.751	MGP_PahariEiJ_G0014745	Smarca4	100	86.939	Mus_pahari
ENSFHEG00000007902	-	99	83.642	MGP_SPRETEiJ_G0033003	Smarca4	100	86.881	Mus_spretus
ENSFHEG00000007902	-	98	84.847	ENSMPUG00000005711	SMARCA4	100	84.327	Mustela_putorius_furo
ENSFHEG00000007902	-	98	84.909	ENSMLUG00000004491	-	100	84.606	Myotis_lucifugus
ENSFHEG00000007902	-	98	84.398	ENSNGAG00000021852	Smarca4	100	84.189	Nannospalax_galili
ENSFHEG00000007902	-	90	86.239	ENSNBRG00000018865	-	99	89.484	Neolamprologus_brichardi
ENSFHEG00000007902	-	94	84.434	ENSNBRG00000011457	smarca4a	96	84.651	Neolamprologus_brichardi
ENSFHEG00000007902	-	94	81.407	ENSNLEG00000012389	SMARCA4	94	81.664	Nomascus_leucogenys
ENSFHEG00000007902	-	80	96.552	ENSOPRG00000000885	-	78	96.552	Ochotona_princeps
ENSFHEG00000007902	-	99	82.560	ENSODEG00000017127	SMARCA4	100	82.374	Octodon_degus
ENSFHEG00000007902	-	98	85.562	ENSONIG00000008196	smarca4a	100	85.356	Oreochromis_niloticus
ENSFHEG00000007902	-	99	95.144	ENSONIG00000018040	-	100	95.324	Oreochromis_niloticus
ENSFHEG00000007902	-	98	78.707	ENSOCUG00000001787	SMARCA4	98	78.558	Oryctolagus_cuniculus
ENSFHEG00000007902	-	97	81.957	ENSORLG00000015452	smarca4a	100	84.409	Oryzias_latipes
ENSFHEG00000007902	-	97	93.572	ENSORLG00000003955	-	100	93.545	Oryzias_latipes
ENSFHEG00000007902	-	97	81.835	ENSORLG00020004611	smarca4a	100	84.409	Oryzias_latipes_hni
ENSFHEG00000007902	-	97	93.453	ENSORLG00020009728	-	100	93.489	Oryzias_latipes_hni
ENSFHEG00000007902	-	97	81.774	ENSORLG00015016560	smarca4a	100	84.349	Oryzias_latipes_hsok
ENSFHEG00000007902	-	100	92.887	ENSORLG00015007739	-	100	93.126	Oryzias_latipes_hsok
ENSFHEG00000007902	-	98	84.505	ENSOMEG00000007486	smarca4a	100	84.680	Oryzias_melastigma
ENSFHEG00000007902	-	97	93.816	ENSOMEG00000016626	-	100	93.900	Oryzias_melastigma
ENSFHEG00000007902	-	90	82.724	ENSOGAG00000016148	SMARCA4	100	83.400	Otolemur_garnettii
ENSFHEG00000007902	-	99	83.214	ENSOARG00000017454	SMARCA4	97	83.859	Ovis_aries
ENSFHEG00000007902	-	98	85.009	ENSPPAG00000043191	SMARCA4	100	84.267	Pan_paniscus
ENSFHEG00000007902	-	99	83.850	ENSPPRG00000000064	SMARCA4	100	84.295	Panthera_pardus
ENSFHEG00000007902	-	93	85.994	ENSPTIG00000017447	SMARCA4	100	79.260	Panthera_tigris_altaica
ENSFHEG00000007902	-	98	85.009	ENSPTRG00000010488	SMARCA4	100	84.267	Pan_troglodytes
ENSFHEG00000007902	-	98	84.938	ENSPANG00000011042	SMARCA4	99	84.267	Papio_anubis
ENSFHEG00000007902	-	99	86.841	ENSPKIG00000007770	SMARCA4	100	86.423	Paramormyrops_kingsleyae
ENSFHEG00000007902	-	96	85.812	ENSPKIG00000010087	-	97	84.926	Paramormyrops_kingsleyae
ENSFHEG00000007902	-	99	78.907	ENSPSIG00000005547	SMARCA4	100	78.843	Pelodiscus_sinensis
ENSFHEG00000007902	-	98	84.476	ENSPEMG00000020389	Smarca4	100	83.838	Peromyscus_maniculatus_bairdii
ENSFHEG00000007902	-	99	84.160	ENSPCIG00000017138	SMARCA4	100	84.220	Phascolarctos_cinereus
ENSFHEG00000007902	-	100	98.263	ENSPFOG00000012930	-	100	98.263	Poecilia_formosa
ENSFHEG00000007902	-	99	82.867	ENSPFOG00000007892	smarca4a	100	83.760	Poecilia_formosa
ENSFHEG00000007902	-	99	83.046	ENSPLAG00000014294	smarca4a	100	83.938	Poecilia_latipinna
ENSFHEG00000007902	-	99	94.786	ENSPLAG00000018616	-	99	94.786	Poecilia_latipinna
ENSFHEG00000007902	-	97	97.644	ENSPMEG00000008929	-	98	97.644	Poecilia_mexicana
ENSFHEG00000007902	-	95	83.750	ENSPMEG00000003725	smarca4a	96	84.543	Poecilia_mexicana
ENSFHEG00000007902	-	99	82.957	ENSPREG00000014608	smarca4a	100	83.551	Poecilia_reticulata
ENSFHEG00000007902	-	97	98.139	ENSPREG00000014823	-	98	98.139	Poecilia_reticulata
ENSFHEG00000007902	-	99	82.529	ENSPPYG00000009568	SMARCA4	100	83.186	Pongo_abelii
ENSFHEG00000007902	-	79	82.119	ENSPCAG00000014054	SMARCA4	77	82.119	Procavia_capensis
ENSFHEG00000007902	-	98	84.947	ENSPCOG00000023011	SMARCA4	100	84.176	Propithecus_coquereli
ENSFHEG00000007902	-	93	82.243	ENSPVAG00000007787	SMARCA4	94	81.648	Pteropus_vampyrus
ENSFHEG00000007902	-	94	88.092	ENSPNYG00000023995	-	99	89.627	Pundamilia_nyererei
ENSFHEG00000007902	-	98	84.547	ENSPNYG00000000717	smarca4a	96	86.047	Pundamilia_nyererei
ENSFHEG00000007902	-	95	87.555	ENSPNAG00000006636	-	93	88.063	Pygocentrus_nattereri
ENSFHEG00000007902	-	97	80.120	ENSPNAG00000024136	smarca4a	98	82.538	Pygocentrus_nattereri
ENSFHEG00000007902	-	98	84.635	ENSRNOG00000009271	Smarca4	100	84.029	Rattus_norvegicus
ENSFHEG00000007902	-	98	84.947	ENSRBIG00000038696	SMARCA4	99	84.148	Rhinopithecus_bieti
ENSFHEG00000007902	-	98	85.009	ENSRROG00000045509	SMARCA4	100	84.207	Rhinopithecus_roxellana
ENSFHEG00000007902	-	98	84.947	ENSSBOG00000026896	SMARCA4	99	84.750	Saimiri_boliviensis_boliviensis
ENSFHEG00000007902	-	99	83.921	ENSSHAG00000001642	SMARCA4	100	84.100	Sarcophilus_harrisii
ENSFHEG00000007902	-	99	86.251	ENSSFOG00015013823	smarca4	99	85.535	Scleropages_formosus
ENSFHEG00000007902	-	91	91.187	ENSSFOG00015009921	-	92	90.821	Scleropages_formosus
ENSFHEG00000007902	-	98	85.354	ENSSMAG00000003200	smarca4a	100	84.643	Scophthalmus_maximus
ENSFHEG00000007902	-	100	91.148	ENSSMAG00000014082	-	100	92.110	Scophthalmus_maximus
ENSFHEG00000007902	-	99	93.689	ENSSDUG00000005388	-	100	95.682	Seriola_dumerili
ENSFHEG00000007902	-	98	81.767	ENSSDUG00000017298	smarca4a	100	81.083	Seriola_dumerili
ENSFHEG00000007902	-	98	83.762	ENSSLDG00000024486	smarca4a	100	85.518	Seriola_lalandi_dorsalis
ENSFHEG00000007902	-	96	93.738	ENSSLDG00000023663	-	99	93.738	Seriola_lalandi_dorsalis
ENSFHEG00000007902	-	64	98.137	ENSSARG00000013477	SMARCA4	82	98.137	Sorex_araneus
ENSFHEG00000007902	-	95	82.035	ENSSPUG00000004558	SMARCA4	98	82.035	Sphenodon_punctatus
ENSFHEG00000007902	-	99	83.831	ENSSPAG00000004248	smarca4a	100	85.042	Stegastes_partitus
ENSFHEG00000007902	-	100	95.600	ENSSPAG00000012533	-	100	95.600	Stegastes_partitus
ENSFHEG00000007902	-	98	84.913	ENSSSCG00000013629	SMARCA4	100	84.355	Sus_scrofa
ENSFHEG00000007902	-	50	85.024	ENSTGUG00000015488	-	99	85.041	Taeniopygia_guttata
ENSFHEG00000007902	-	97	91.197	ENSTRUG00000001378	SMARCA4	99	91.197	Takifugu_rubripes
ENSFHEG00000007902	-	90	80.053	ENSTRUG00000004885	smarca4a	100	79.563	Takifugu_rubripes
ENSFHEG00000007902	-	99	89.606	ENSTNIG00000004536	SMARCA4	100	89.188	Tetraodon_nigroviridis
ENSFHEG00000007902	-	72	84.043	ENSTNIG00000004859	-	100	84.043	Tetraodon_nigroviridis
ENSFHEG00000007902	-	50	100.000	ENSTBEG00000000707	-	52	100.000	Tupaia_belangeri
ENSFHEG00000007902	-	99	81.636	ENSTTRG00000009519	SMARCA4	100	81.738	Tursiops_truncatus
ENSFHEG00000007902	-	98	84.909	ENSUAMG00000014661	SMARCA4	100	84.386	Ursus_americanus
ENSFHEG00000007902	-	94	89.291	ENSUMAG00000022005	SMARCA4	98	90.106	Ursus_maritimus
ENSFHEG00000007902	-	98	84.884	ENSVVUG00000017820	SMARCA4	97	84.386	Vulpes_vulpes
ENSFHEG00000007902	-	98	80.900	ENSXETG00000009355	smarca4	99	80.588	Xenopus_tropicalis
ENSFHEG00000007902	-	89	97.887	ENSXCOG00000013494	-	99	90.841	Xiphophorus_couchianus
ENSFHEG00000007902	-	99	82.707	ENSXMAG00000006321	smarca4a	100	83.721	Xiphophorus_maculatus
ENSFHEG00000007902	-	100	97.903	ENSXMAG00000007030	-	100	97.903	Xiphophorus_maculatus