EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000007938 (Gene tree)
Gene ID: 105928289
Gene Symbol: rbm47
Alias: si:ch211-241e15.2|wu:fj94a03
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 42585 bases
Position: chrKN811322.1:1699274-1741858
Accession: 105928289
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000025580	RRM_5	PF13893.6	3.8e-06	1	1
ENSFHEP00000006826	RRM_5	PF13893.6	4.1e-06	1	1
ENSFHEP00000006839	RRM_5	PF13893.6	4.3e-06	1	1
ENSFHEP00000025585	RRM_5	PF13893.6	4.3e-06	1	1
ENSFHEP00000025580	RRM_1	PF00076.22	3.2e-39	1	3
ENSFHEP00000025580	RRM_1	PF00076.22	3.2e-39	2	3
ENSFHEP00000025580	RRM_1	PF00076.22	3.2e-39	3	3
ENSFHEP00000006826	RRM_1	PF00076.22	3.6e-39	1	3
ENSFHEP00000006826	RRM_1	PF00076.22	3.6e-39	2	3
ENSFHEP00000006826	RRM_1	PF00076.22	3.6e-39	3	3
ENSFHEP00000006839	RRM_1	PF00076.22	3.9e-39	1	3
ENSFHEP00000006839	RRM_1	PF00076.22	3.9e-39	2	3
ENSFHEP00000006839	RRM_1	PF00076.22	3.9e-39	3	3
ENSFHEP00000025585	RRM_1	PF00076.22	3.9e-39	1	3
ENSFHEP00000025585	RRM_1	PF00076.22	3.9e-39	2	3
ENSFHEP00000025585	RRM_1	PF00076.22	3.9e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000004857	-	1954	XM_012865479	ENSFHEP00000025585	609 (aa)	XP_012720933	UPI0006450F03
ENSFHET00000004852	-	2554	XM_012865482	ENSFHEP00000006826	601 (aa)	XP_012720936	UPI000644BC59
ENSFHET00000004840	-	2578	XM_012865476	ENSFHEP00000006839	609 (aa)	XP_012720930	UPI0006450F03
ENSFHET00000004876	-	1752	XM_021318007	ENSFHEP00000025580	583 (aa)	XP_021173682	-

Gene Model

Click here to download ENSFHEG00000007938's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000007938's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000007938	rbm47	52	53.922	ENSFHEG00000012603	hnrnpr	68	46.118
ENSFHEG00000007938	rbm47	51	53.488	ENSFHEG00000012229	syncrip	78	43.653
ENSFHEG00000007938	rbm47	55	59.816	ENSFHEG00000013257	rbm46	83	59.451
ENSFHEG00000007938	rbm47	55	50.599	ENSFHEG00000012955	syncripl	75	46.556
ENSFHEG00000007938	rbm47	79	47.467	ENSFHEG00000019652	a1cf	93	58.400

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000007938	rbm47	100	74.080	ENSG00000163694	RBM47	100	85.253	Homo_sapiens
ENSFHEG00000007938	rbm47	100	89.545	ENSAPOG00000011062	rbm47	100	93.316	Acanthochromis_polyacanthus
ENSFHEG00000007938	rbm47	100	73.211	ENSAMEG00000009672	RBM47	100	76.373	Ailuropoda_melanoleuca
ENSFHEG00000007938	rbm47	100	90.323	ENSACIG00000011531	rbm47	100	90.832	Amphilophus_citrinellus
ENSFHEG00000007938	rbm47	100	90.678	ENSAOCG00000022245	rbm47	100	93.573	Amphiprion_ocellaris
ENSFHEG00000007938	rbm47	100	90.832	ENSAPEG00000018304	rbm47	100	93.573	Amphiprion_percula
ENSFHEG00000007938	rbm47	100	90.865	ENSATEG00000018400	rbm47	100	91.028	Anabas_testudineus
ENSFHEG00000007938	rbm47	100	76.589	ENSAPLG00000013974	RBM47	100	76.087	Anas_platyrhynchos
ENSFHEG00000007938	rbm47	100	74.542	ENSACAG00000011833	RBM47	100	75.748	Anolis_carolinensis
ENSFHEG00000007938	rbm47	100	74.667	ENSANAG00000029440	RBM47	100	80.977	Aotus_nancymaae
ENSFHEG00000007938	rbm47	100	89.303	ENSACLG00000016902	rbm47	100	92.228	Astatotilapia_calliptera
ENSFHEG00000007938	rbm47	100	81.609	ENSAMXG00000021794	rbm47	100	81.773	Astyanax_mexicanus
ENSFHEG00000007938	rbm47	100	75.336	ENSBTAG00000002356	RBM47	100	77.349	Bos_taurus
ENSFHEG00000007938	rbm47	97	76.696	ENSCJAG00000019385	RBM47	96	86.761	Callithrix_jacchus
ENSFHEG00000007938	rbm47	97	76.829	ENSCAFG00000015898	RBM47	100	76.589	Canis_familiaris
ENSFHEG00000007938	rbm47	83	79.226	ENSCAFG00020010558	RBM47	94	81.963	Canis_lupus_dingo
ENSFHEG00000007938	rbm47	100	75.336	ENSCHIG00000026214	RBM47	100	77.349	Capra_hircus
ENSFHEG00000007938	rbm47	84	85.650	ENSTSYG00000033612	RBM47	93	84.513	Carlito_syrichta
ENSFHEG00000007938	rbm47	100	71.092	ENSCAPG00000008426	RBM47	100	71.261	Cavia_aperea
ENSFHEG00000007938	rbm47	100	75.503	ENSCPOG00000014100	RBM47	100	76.510	Cavia_porcellus
ENSFHEG00000007938	rbm47	100	76.007	ENSCCAG00000030129	-	100	80.977	Cebus_capucinus
ENSFHEG00000007938	rbm47	99	53.859	ENSCCAG00000024397	-	99	54.362	Cebus_capucinus
ENSFHEG00000007938	rbm47	100	74.831	ENSCATG00000042064	RBM47	96	87.042	Cercocebus_atys
ENSFHEG00000007938	rbm47	100	75.126	ENSCLAG00000001684	RBM47	100	80.380	Chinchilla_lanigera
ENSFHEG00000007938	rbm47	100	74.080	ENSCSAG00000017060	RBM47	100	77.000	Chlorocebus_sabaeus
ENSFHEG00000007938	rbm47	89	74.550	ENSCHOG00000011731	RBM47	88	77.303	Choloepus_hoffmanni
ENSFHEG00000007938	rbm47	100	78.428	ENSCPBG00000013831	RBM47	100	79.466	Chrysemys_picta_bellii
ENSFHEG00000007938	rbm47	100	75.589	ENSCANG00000019997	RBM47	96	87.042	Colobus_angolensis_palliatus
ENSFHEG00000007938	rbm47	90	75.128	ENSCGRG00001020102	-	100	78.515	Cricetulus_griseus_chok1gshd
ENSFHEG00000007938	rbm47	100	74.542	ENSCGRG00001000623	-	96	86.479	Cricetulus_griseus_chok1gshd
ENSFHEG00000007938	rbm47	90	74.872	ENSCGRG00000014760	-	100	78.249	Cricetulus_griseus_crigri
ENSFHEG00000007938	rbm47	100	73.710	ENSCGRG00000007762	-	100	81.646	Cricetulus_griseus_crigri
ENSFHEG00000007938	rbm47	100	87.288	ENSCSEG00000004545	rbm47	100	87.288	Cynoglossus_semilaevis
ENSFHEG00000007938	rbm47	100	94.728	ENSCVAG00000020144	rbm47	100	96.915	Cyprinodon_variegatus
ENSFHEG00000007938	rbm47	100	82.343	ENSDARG00000061985	rbm47	100	83.663	Danio_rerio
ENSFHEG00000007938	rbm47	100	76.351	ENSDNOG00000046854	RBM47	100	78.378	Dasypus_novemcinctus
ENSFHEG00000007938	rbm47	100	74.751	ENSDORG00000010144	Rbm47	100	76.119	Dipodomys_ordii
ENSFHEG00000007938	rbm47	97	76.027	ENSETEG00000009194	RBM47	100	76.962	Echinops_telfairi
ENSFHEG00000007938	rbm47	100	58.375	ENSEBUG00000011912	rbm47	100	58.541	Eptatretus_burgeri
ENSFHEG00000007938	rbm47	100	75.336	ENSEASG00005008443	RBM47	100	77.517	Equus_asinus_asinus
ENSFHEG00000007938	rbm47	100	75.336	ENSECAG00000004400	RBM47	100	77.517	Equus_caballus
ENSFHEG00000007938	rbm47	72	88.038	ENSEEUG00000001194	RBM47	72	89.202	Erinaceus_europaeus
ENSFHEG00000007938	rbm47	100	79.902	ENSELUG00000006148	rbm47	100	86.835	Esox_lucius
ENSFHEG00000007938	rbm47	100	75.084	ENSFCAG00000012399	RBM47	100	77.609	Felis_catus
ENSFHEG00000007938	rbm47	100	77.592	ENSFALG00000002861	RBM47	100	78.595	Ficedula_albicollis
ENSFHEG00000007938	rbm47	100	75.253	ENSFDAG00000016326	RBM47	100	75.253	Fukomys_damarensis
ENSFHEG00000007938	rbm47	100	82.362	ENSGMOG00000014802	rbm47	100	82.362	Gadus_morhua
ENSFHEG00000007938	rbm47	63	84.085	ENSGALG00000014267	RBM47	99	84.309	Gallus_gallus
ENSFHEG00000007938	rbm47	63	97.561	ENSGAFG00000020571	rbm47	98	97.561	Gambusia_affinis
ENSFHEG00000007938	rbm47	100	86.964	ENSGACG00000016223	rbm47	100	89.460	Gasterosteus_aculeatus
ENSFHEG00000007938	rbm47	100	78.261	ENSGAGG00000020051	RBM47	100	79.299	Gopherus_agassizii
ENSFHEG00000007938	rbm47	100	74.831	ENSGGOG00000001367	RBM47	96	87.042	Gorilla_gorilla
ENSFHEG00000007938	rbm47	100	89.015	ENSHBUG00000003520	rbm47	100	92.228	Haplochromis_burtoni
ENSFHEG00000007938	rbm47	84	62.933	ENSHGLG00000016914	RBM47	100	79.747	Heterocephalus_glaber_female
ENSFHEG00000007938	rbm47	100	67.563	ENSHGLG00100003071	-	100	67.731	Heterocephalus_glaber_male
ENSFHEG00000007938	rbm47	100	75.126	ENSHGLG00100014028	-	100	79.747	Heterocephalus_glaber_male
ENSFHEG00000007938	rbm47	99	88.663	ENSHCOG00000002074	rbm47	99	92.031	Hippocampus_comes
ENSFHEG00000007938	rbm47	100	83.503	ENSIPUG00000004743	rbm47	100	84.524	Ictalurus_punctatus
ENSFHEG00000007938	rbm47	100	74.791	ENSSTOG00000004727	RBM47	100	81.443	Ictidomys_tridecemlineatus
ENSFHEG00000007938	rbm47	97	76.298	ENSJJAG00000013823	Rbm47	100	75.874	Jaculus_jaculus
ENSFHEG00000007938	rbm47	100	90.268	ENSKMAG00000000084	rbm47	100	93.846	Kryptolebias_marmoratus
ENSFHEG00000007938	rbm47	100	88.633	ENSLBEG00000008436	rbm47	100	91.184	Labrus_bergylta
ENSFHEG00000007938	rbm47	100	77.983	ENSLACG00000007196	RBM47	100	79.027	Latimeria_chalumnae
ENSFHEG00000007938	rbm47	100	82.712	ENSLOCG00000012966	rbm47	95	84.264	Lepisosteus_oculatus
ENSFHEG00000007938	rbm47	100	76.231	ENSLAFG00000011998	RBM47	100	77.554	Loxodonta_africana
ENSFHEG00000007938	rbm47	100	74.831	ENSMFAG00000037967	RBM47	96	87.042	Macaca_fascicularis
ENSFHEG00000007938	rbm47	100	74.080	ENSMMUG00000012036	RBM47	100	83.420	Macaca_mulatta
ENSFHEG00000007938	rbm47	100	74.662	ENSMNEG00000040774	RBM47	96	87.042	Macaca_nemestrina
ENSFHEG00000007938	rbm47	100	83.175	ENSMLEG00000041432	RBM47	100	85.397	Mandrillus_leucophaeus
ENSFHEG00000007938	rbm47	100	90.228	ENSMAMG00000019143	rbm47	100	92.545	Mastacembelus_armatus
ENSFHEG00000007938	rbm47	100	89.303	ENSMZEG00005023659	rbm47	99	92.228	Maylandia_zebra
ENSFHEG00000007938	rbm47	100	78.000	ENSMGAG00000012226	RBM47	100	79.035	Meleagris_gallopavo
ENSFHEG00000007938	rbm47	100	73.833	ENSMAUG00000006493	Rbm47	96	85.674	Mesocricetus_auratus
ENSFHEG00000007938	rbm47	100	73.469	ENSMICG00000026417	RBM47	100	80.412	Microcebus_murinus
ENSFHEG00000007938	rbm47	100	73.623	ENSMOCG00000021170	Rbm47	96	85.634	Microtus_ochrogaster
ENSFHEG00000007938	rbm47	100	89.570	ENSMMOG00000007260	rbm47	100	89.735	Mola_mola
ENSFHEG00000007938	rbm47	52	79.355	ENSMODG00000015426	-	97	79.355	Monodelphis_domestica
ENSFHEG00000007938	rbm47	100	76.884	ENSMODG00000007003	RBM47	100	77.722	Monodelphis_domestica
ENSFHEG00000007938	rbm47	99	73.150	ENSMODG00000020561	-	98	73.666	Monodelphis_domestica
ENSFHEG00000007938	rbm47	100	89.915	ENSMALG00000005167	rbm47	100	91.774	Monopterus_albus
ENSFHEG00000007938	rbm47	100	74.080	MGP_CAROLIEiJ_G0027258	Rbm47	96	85.915	Mus_caroli
ENSFHEG00000007938	rbm47	100	74.415	ENSMUSG00000070780	Rbm47	96	86.197	Mus_musculus
ENSFHEG00000007938	rbm47	100	74.247	MGP_PahariEiJ_G0017040	Rbm47	96	85.915	Mus_pahari
ENSFHEG00000007938	rbm47	100	74.790	MGP_SPRETEiJ_G0028253	Rbm47	96	86.197	Mus_spretus
ENSFHEG00000007938	rbm47	100	74.080	ENSMPUG00000006177	RBM47	94	76.589	Mustela_putorius_furo
ENSFHEG00000007938	rbm47	100	76.007	ENSMLUG00000000889	RBM47	100	77.181	Myotis_lucifugus
ENSFHEG00000007938	rbm47	100	74.500	ENSNGAG00000003325	Rbm47	100	76.000	Nannospalax_galili
ENSFHEG00000007938	rbm47	100	89.344	ENSNBRG00000015092	rbm47	100	89.344	Neolamprologus_brichardi
ENSFHEG00000007938	rbm47	100	74.662	ENSNLEG00000017151	RBM47	96	87.042	Nomascus_leucogenys
ENSFHEG00000007938	rbm47	73	79.302	ENSMEUG00000009516	-	100	79.302	Notamacropus_eugenii
ENSFHEG00000007938	rbm47	76	84.647	ENSOPRG00000016507	-	75	84.647	Ochotona_princeps
ENSFHEG00000007938	rbm47	100	74.286	ENSODEG00000004873	RBM47	100	75.966	Octodon_degus
ENSFHEG00000007938	rbm47	100	88.322	ENSONIG00000009061	rbm47	100	88.487	Oreochromis_niloticus
ENSFHEG00000007938	rbm47	100	77.143	ENSOANG00000008978	RBM47	100	78.655	Ornithorhynchus_anatinus
ENSFHEG00000007938	rbm47	100	75.168	ENSOCUG00000012034	RBM47	100	77.181	Oryctolagus_cuniculus
ENSFHEG00000007938	rbm47	100	89.386	ENSORLG00000005847	rbm47	100	91.990	Oryzias_latipes
ENSFHEG00000007938	rbm47	100	89.552	ENSORLG00020005154	rbm47	100	91.990	Oryzias_latipes_hni
ENSFHEG00000007938	rbm47	100	89.238	ENSORLG00015000066	rbm47	100	91.990	Oryzias_latipes_hsok
ENSFHEG00000007938	rbm47	100	88.776	ENSOMEG00000010730	rbm47	100	89.116	Oryzias_melastigma
ENSFHEG00000007938	rbm47	100	69.024	ENSOGAG00000025193	-	100	71.717	Otolemur_garnettii
ENSFHEG00000007938	rbm47	100	74.247	ENSOGAG00000029367	-	100	76.756	Otolemur_garnettii
ENSFHEG00000007938	rbm47	100	67.617	ENSOARG00000012711	RBM47	100	69.631	Ovis_aries
ENSFHEG00000007938	rbm47	100	74.831	ENSPPAG00000029763	RBM47	95	83.777	Pan_paniscus
ENSFHEG00000007938	rbm47	100	73.737	ENSPPRG00000012873	RBM47	99	83.200	Panthera_pardus
ENSFHEG00000007938	rbm47	86	75.649	ENSPTIG00000017046	RBM47	100	76.447	Panthera_tigris_altaica
ENSFHEG00000007938	rbm47	100	74.831	ENSPTRG00000016006	RBM47	96	87.042	Pan_troglodytes
ENSFHEG00000007938	rbm47	100	74.831	ENSPANG00000005980	RBM47	96	87.042	Papio_anubis
ENSFHEG00000007938	rbm47	100	75.340	ENSPKIG00000013431	RBM47	98	83.204	Paramormyrops_kingsleyae
ENSFHEG00000007938	rbm47	98	80.139	ENSPKIG00000005037	rbm47	100	78.053	Paramormyrops_kingsleyae
ENSFHEG00000007938	rbm47	89	80.529	ENSPSIG00000017516	RBM47	97	80.718	Pelodiscus_sinensis
ENSFHEG00000007938	rbm47	100	89.438	ENSPMGG00000018540	rbm47	100	89.438	Periophthalmus_magnuspinnatus
ENSFHEG00000007938	rbm47	100	73.500	ENSPEMG00000011088	Rbm47	96	85.352	Peromyscus_maniculatus_bairdii
ENSFHEG00000007938	rbm47	100	92.647	ENSPFOG00000007997	rbm47	100	92.974	Poecilia_formosa
ENSFHEG00000007938	rbm47	100	92.635	ENSPLAG00000002072	rbm47	100	97.011	Poecilia_latipinna
ENSFHEG00000007938	rbm47	100	93.739	ENSPMEG00000017492	rbm47	100	95.887	Poecilia_mexicana
ENSFHEG00000007938	rbm47	100	92.892	ENSPREG00000008456	rbm47	100	97.011	Poecilia_reticulata
ENSFHEG00000007938	rbm47	99	66.667	ENSPPYG00000014688	RBM47	99	68.074	Pongo_abelii
ENSFHEG00000007938	rbm47	82	81.203	ENSPCAG00000011879	RBM47	81	83.960	Procavia_capensis
ENSFHEG00000007938	rbm47	100	74.199	ENSPCOG00000023451	RBM47	96	85.552	Propithecus_coquereli
ENSFHEG00000007938	rbm47	100	74.124	ENSPVAG00000003812	RBM47	100	76.628	Pteropus_vampyrus
ENSFHEG00000007938	rbm47	100	88.725	ENSPNYG00000022868	rbm47	100	88.725	Pundamilia_nyererei
ENSFHEG00000007938	rbm47	100	82.237	ENSPNAG00000007940	rbm47	100	83.059	Pygocentrus_nattereri
ENSFHEG00000007938	rbm47	100	74.415	ENSRNOG00000002408	Rbm47	100	76.589	Rattus_norvegicus
ENSFHEG00000007938	rbm47	100	75.589	ENSRBIG00000039601	RBM47	96	87.042	Rhinopithecus_bieti
ENSFHEG00000007938	rbm47	100	75.589	ENSRROG00000044696	RBM47	96	87.042	Rhinopithecus_roxellana
ENSFHEG00000007938	rbm47	100	74.450	ENSSBOG00000028475	RBM47	100	80.041	Saimiri_boliviensis_boliviensis
ENSFHEG00000007938	rbm47	100	76.807	ENSSHAG00000017576	RBM47	100	77.983	Sarcophilus_harrisii
ENSFHEG00000007938	rbm47	99	77.625	ENSSFOG00015024101	RBM47	99	77.211	Scleropages_formosus
ENSFHEG00000007938	rbm47	100	78.441	ENSSFOG00015012445	rbm47	100	77.612	Scleropages_formosus
ENSFHEG00000007938	rbm47	100	88.871	ENSSMAG00000009744	rbm47	100	91.392	Scophthalmus_maximus
ENSFHEG00000007938	rbm47	100	90.355	ENSSDUG00000022684	rbm47	100	90.525	Seriola_dumerili
ENSFHEG00000007938	rbm47	100	90.801	ENSSLDG00000003109	rbm47	100	90.971	Seriola_lalandi_dorsalis
ENSFHEG00000007938	rbm47	86	78.571	ENSSARG00000001735	RBM47	84	81.375	Sorex_araneus
ENSFHEG00000007938	rbm47	100	77.740	ENSSPUG00000007515	RBM47	96	86.479	Sphenodon_punctatus
ENSFHEG00000007938	rbm47	100	91.497	ENSSPAG00000001257	rbm47	100	93.059	Stegastes_partitus
ENSFHEG00000007938	rbm47	100	75.839	ENSSSCG00000008796	RBM47	100	77.013	Sus_scrofa
ENSFHEG00000007938	rbm47	100	77.722	ENSTGUG00000008705	RBM47	100	78.727	Taeniopygia_guttata
ENSFHEG00000007938	rbm47	100	88.547	ENSTRUG00000014050	rbm47	100	88.547	Takifugu_rubripes
ENSFHEG00000007938	rbm47	100	88.391	ENSTNIG00000006127	rbm47	100	88.391	Tetraodon_nigroviridis
ENSFHEG00000007938	rbm47	77	79.679	ENSTBEG00000001607	RBM47	76	80.800	Tupaia_belangeri
ENSFHEG00000007938	rbm47	100	76.599	ENSTTRG00000002839	RBM47	100	77.778	Tursiops_truncatus
ENSFHEG00000007938	rbm47	100	75.084	ENSUAMG00000021346	RBM47	100	76.756	Ursus_americanus
ENSFHEG00000007938	rbm47	52	84.000	ENSVPAG00000000641	-	53	88.710	Vicugna_pacos
ENSFHEG00000007938	rbm47	97	77.312	ENSVVUG00000014774	RBM47	100	76.884	Vulpes_vulpes
ENSFHEG00000007938	rbm47	100	76.254	ENSXETG00000012802	rbm47	100	76.756	Xenopus_tropicalis
ENSFHEG00000007938	rbm47	88	97.554	ENSXCOG00000000780	rbm47	100	97.554	Xiphophorus_couchianus
ENSFHEG00000007938	rbm47	100	93.367	ENSXMAG00000009874	rbm47	100	96.474	Xiphophorus_maculatus