EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000008068 (Gene tree)
Gene ID: 105936219
Gene Symbol: gar1
Alias: nola1|zgc:56086
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 4803 bases
Position: chrKN811476.1:22446-27248
Accession: 105936219
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000007003	Gar1	PF04410.14	2.4e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000004560	-	1936	XM_012876932	ENSFHEP00000007003	214 (aa)	XP_012732386	UPI0006449617

Gene Model

Click here to download ENSFHEG00000008068's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000008068's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000008068	gar1	50	93.458	ENSG00000109534	GAR1	51	91.892	Homo_sapiens
ENSFHEG00000008068	gar1	50	97.222	ENSAPOG00000019754	gar1	52	97.297	Acanthochromis_polyacanthus
ENSFHEG00000008068	gar1	68	80.137	ENSAMEG00000004605	GAR1	54	90.090	Ailuropoda_melanoleuca
ENSFHEG00000008068	gar1	50	97.222	ENSAOCG00000020947	gar1	52	97.297	Amphiprion_ocellaris
ENSFHEG00000008068	gar1	50	97.222	ENSAPEG00000001676	gar1	52	97.297	Amphiprion_percula
ENSFHEG00000008068	gar1	50	96.296	ENSATEG00000003733	gar1	52	96.396	Anabas_testudineus
ENSFHEG00000008068	gar1	50	89.623	ENSAPLG00000010926	GAR1	62	87.500	Anas_platyrhynchos
ENSFHEG00000008068	gar1	76	76.074	ENSACAG00000010031	GAR1	53	88.393	Anolis_carolinensis
ENSFHEG00000008068	gar1	50	93.458	ENSANAG00000021608	GAR1	51	91.892	Aotus_nancymaae
ENSFHEG00000008068	gar1	51	96.364	ENSACLG00000010029	gar1	64	87.413	Astatotilapia_calliptera
ENSFHEG00000008068	gar1	68	84.932	ENSBTAG00000000748	GAR1	53	90.991	Bos_taurus
ENSFHEG00000008068	gar1	50	93.458	ENSCJAG00000004041	GAR1	51	91.892	Callithrix_jacchus
ENSFHEG00000008068	gar1	70	83.893	ENSCHIG00000016026	-	53	90.991	Capra_hircus
ENSFHEG00000008068	gar1	50	93.458	ENSTSYG00000013668	-	52	91.892	Carlito_syrichta
ENSFHEG00000008068	gar1	50	85.047	ENSTSYG00000026632	-	57	83.784	Carlito_syrichta
ENSFHEG00000008068	gar1	51	90.909	ENSCPOG00000004216	GAR1	75	90.769	Cavia_porcellus
ENSFHEG00000008068	gar1	50	93.458	ENSCCAG00000029372	GAR1	51	91.892	Cebus_capucinus
ENSFHEG00000008068	gar1	51	91.818	ENSCATG00000021854	GAR1	56	91.892	Cercocebus_atys
ENSFHEG00000008068	gar1	51	90.000	ENSCLAG00000005335	GAR1	69	92.727	Chinchilla_lanigera
ENSFHEG00000008068	gar1	50	91.589	ENSCSAG00000003922	GAR1	56	91.892	Chlorocebus_sabaeus
ENSFHEG00000008068	gar1	50	91.509	ENSCPBG00000004310	GAR1	56	90.090	Chrysemys_picta_bellii
ENSFHEG00000008068	gar1	51	90.909	ENSCANG00000039262	GAR1	51	90.991	Colobus_angolensis_palliatus
ENSFHEG00000008068	gar1	63	86.567	ENSCGRG00001003919	Gar1	50	93.694	Cricetulus_griseus_chok1gshd
ENSFHEG00000008068	gar1	50	95.370	ENSCSEG00000003525	gar1	50	95.495	Cynoglossus_semilaevis
ENSFHEG00000008068	gar1	100	95.794	ENSCVAG00000002103	gar1	100	95.794	Cyprinodon_variegatus
ENSFHEG00000008068	gar1	63	82.836	ENSDNOG00000037632	GAR1	56	90.991	Dasypus_novemcinctus
ENSFHEG00000008068	gar1	52	90.090	ENSDORG00000000482	Gar1	51	90.090	Dipodomys_ordii
ENSFHEG00000008068	gar1	51	91.818	ENSEASG00005004658	GAR1	51	91.892	Equus_asinus_asinus
ENSFHEG00000008068	gar1	51	90.909	ENSECAG00000013624	GAR1	56	90.991	Equus_caballus
ENSFHEG00000008068	gar1	50	92.523	ENSFCAG00000040791	-	53	90.991	Felis_catus
ENSFHEG00000008068	gar1	50	57.009	ENSFCAG00000025841	-	52	58.559	Felis_catus
ENSFHEG00000008068	gar1	50	93.396	ENSFALG00000006445	GAR1	51	91.071	Ficedula_albicollis
ENSFHEG00000008068	gar1	50	91.667	ENSGMOG00000012419	gar1	58	80.153	Gadus_morhua
ENSFHEG00000008068	gar1	50	91.509	ENSGALG00000020164	GAR1	51	89.286	Gallus_gallus
ENSFHEG00000008068	gar1	50	94.393	ENSGGOG00000008681	GAR1	51	92.793	Gorilla_gorilla
ENSFHEG00000008068	gar1	50	93.458	ENSHGLG00000000493	GAR1	72	94.545	Heterocephalus_glaber_female
ENSFHEG00000008068	gar1	50	94.444	ENSHCOG00000008656	gar1	50	94.495	Hippocampus_comes
ENSFHEG00000008068	gar1	51	95.455	ENSIPUG00000003194	gar1	53	95.495	Ictalurus_punctatus
ENSFHEG00000008068	gar1	51	90.826	ENSSTOG00000005577	GAR1	71	92.727	Ictidomys_tridecemlineatus
ENSFHEG00000008068	gar1	53	91.228	ENSJJAG00000010063	Gar1	50	90.991	Jaculus_jaculus
ENSFHEG00000008068	gar1	52	95.495	ENSKMAG00000010402	gar1	53	95.495	Kryptolebias_marmoratus
ENSFHEG00000008068	gar1	58	84.000	ENSLACG00000003306	GAR1	79	82.443	Latimeria_chalumnae
ENSFHEG00000008068	gar1	50	82.407	ENSMFAG00000003572	-	54	81.081	Macaca_fascicularis
ENSFHEG00000008068	gar1	51	91.818	ENSMFAG00000024592	GAR1	51	91.892	Macaca_fascicularis
ENSFHEG00000008068	gar1	51	91.818	ENSMMUG00000021225	GAR1	51	91.892	Macaca_mulatta
ENSFHEG00000008068	gar1	51	91.818	ENSMNEG00000042594	GAR1	51	91.892	Macaca_nemestrina
ENSFHEG00000008068	gar1	51	91.818	ENSMLEG00000002496	GAR1	51	91.892	Mandrillus_leucophaeus
ENSFHEG00000008068	gar1	51	96.330	ENSMAMG00000017583	gar1	50	96.364	Mastacembelus_armatus
ENSFHEG00000008068	gar1	51	96.364	ENSMZEG00005001281	gar1	64	87.413	Maylandia_zebra
ENSFHEG00000008068	gar1	50	91.509	ENSMGAG00000011058	GAR1	50	89.286	Meleagris_gallopavo
ENSFHEG00000008068	gar1	63	86.567	ENSMAUG00000016788	Gar1	70	94.545	Mesocricetus_auratus
ENSFHEG00000008068	gar1	73	75.641	ENSMICG00000003326	GAR1	51	90.991	Microcebus_murinus
ENSFHEG00000008068	gar1	63	84.328	ENSMOCG00000001340	Gar1	70	94.545	Microtus_ochrogaster
ENSFHEG00000008068	gar1	58	93.600	ENSMMOG00000004156	gar1	54	94.595	Mola_mola
ENSFHEG00000008068	gar1	68	80.822	ENSMODG00000005897	GAR1	76	84.559	Monodelphis_domestica
ENSFHEG00000008068	gar1	50	95.327	ENSMALG00000009672	gar1	51	94.595	Monopterus_albus
ENSFHEG00000008068	gar1	63	85.821	MGP_CAROLIEiJ_G0025627	Gar1	70	94.545	Mus_caroli
ENSFHEG00000008068	gar1	70	91.870	ENSMUSG00000028010	Gar1	70	94.545	Mus_musculus
ENSFHEG00000008068	gar1	64	84.672	MGP_PahariEiJ_G0027076	Gar1	70	94.545	Mus_pahari
ENSFHEG00000008068	gar1	70	91.870	MGP_SPRETEiJ_G0026580	Gar1	70	94.545	Mus_spretus
ENSFHEG00000008068	gar1	50	92.523	ENSMPUG00000008615	GAR1	53	90.991	Mustela_putorius_furo
ENSFHEG00000008068	gar1	50	92.523	ENSMLUG00000003776	GAR1	50	90.991	Myotis_lucifugus
ENSFHEG00000008068	gar1	72	79.221	ENSNGAG00000008268	Gar1	71	92.727	Nannospalax_galili
ENSFHEG00000008068	gar1	51	91.818	ENSNLEG00000016578	GAR1	51	91.892	Nomascus_leucogenys
ENSFHEG00000008068	gar1	50	91.589	ENSODEG00000011083	GAR1	57	90.991	Octodon_degus
ENSFHEG00000008068	gar1	50	97.222	ENSONIG00000001085	gar1	50	97.297	Oreochromis_niloticus
ENSFHEG00000008068	gar1	50	93.458	ENSOCUG00000003901	GAR1	52	91.892	Oryctolagus_cuniculus
ENSFHEG00000008068	gar1	50	96.296	ENSORLG00000020583	gar1	50	96.396	Oryzias_latipes
ENSFHEG00000008068	gar1	50	96.296	ENSORLG00020008602	gar1	50	96.396	Oryzias_latipes_hni
ENSFHEG00000008068	gar1	50	96.296	ENSORLG00015017643	gar1	51	96.396	Oryzias_latipes_hsok
ENSFHEG00000008068	gar1	50	93.458	ENSOGAG00000004693	GAR1	52	91.892	Otolemur_garnettii
ENSFHEG00000008068	gar1	50	92.523	ENSOARG00000004910	GAR1	53	90.991	Ovis_aries
ENSFHEG00000008068	gar1	50	93.458	ENSPPAG00000014081	GAR1	56	91.892	Pan_paniscus
ENSFHEG00000008068	gar1	50	92.523	ENSPPRG00000023697	GAR1	53	90.991	Panthera_pardus
ENSFHEG00000008068	gar1	50	92.523	ENSPTIG00000021565	GAR1	53	90.991	Panthera_tigris_altaica
ENSFHEG00000008068	gar1	51	91.818	ENSPTRG00000016364	GAR1	56	91.892	Pan_troglodytes
ENSFHEG00000008068	gar1	51	91.818	ENSPANG00000000639	GAR1	51	91.892	Papio_anubis
ENSFHEG00000008068	gar1	50	91.509	ENSPSIG00000002970	GAR1	51	90.090	Pelodiscus_sinensis
ENSFHEG00000008068	gar1	83	86.567	ENSPEMG00000015838	Gar1	84	87.179	Peromyscus_maniculatus_bairdii
ENSFHEG00000008068	gar1	50	97.222	ENSPFOG00000024155	gar1	53	97.297	Poecilia_formosa
ENSFHEG00000008068	gar1	50	97.222	ENSPLAG00000015056	gar1	53	97.297	Poecilia_latipinna
ENSFHEG00000008068	gar1	100	93.519	ENSPMEG00000009320	gar1	100	93.519	Poecilia_mexicana
ENSFHEG00000008068	gar1	50	93.458	ENSPPYG00000014996	GAR1	51	91.892	Pongo_abelii
ENSFHEG00000008068	gar1	50	91.589	ENSPCOG00000027049	GAR1	57	91.892	Propithecus_coquereli
ENSFHEG00000008068	gar1	63	86.567	ENSRNOG00000061146	Gar1	79	86.667	Rattus_norvegicus
ENSFHEG00000008068	gar1	52	76.786	ENSRBIG00000042411	-	54	76.577	Rhinopithecus_bieti
ENSFHEG00000008068	gar1	50	93.458	ENSRBIG00000019547	GAR1	56	91.892	Rhinopithecus_bieti
ENSFHEG00000008068	gar1	52	76.786	ENSRROG00000044348	-	53	76.577	Rhinopithecus_roxellana
ENSFHEG00000008068	gar1	51	91.818	ENSRROG00000028454	GAR1	56	91.892	Rhinopithecus_roxellana
ENSFHEG00000008068	gar1	50	93.458	ENSSBOG00000024785	GAR1	66	90.678	Saimiri_boliviensis_boliviensis
ENSFHEG00000008068	gar1	50	93.519	ENSSMAG00000009976	gar1	51	93.694	Scophthalmus_maximus
ENSFHEG00000008068	gar1	50	96.296	ENSSLDG00000023264	gar1	52	96.396	Seriola_lalandi_dorsalis
ENSFHEG00000008068	gar1	50	92.453	ENSSPUG00000008707	GAR1	62	90.991	Sphenodon_punctatus
ENSFHEG00000008068	gar1	50	92.523	ENSSSCG00000009137	GAR1	55	90.991	Sus_scrofa
ENSFHEG00000008068	gar1	50	95.370	ENSTRUG00000020580	gar1	53	95.495	Takifugu_rubripes
ENSFHEG00000008068	gar1	50	92.523	ENSUMAG00000000776	GAR1	54	90.991	Ursus_maritimus
ENSFHEG00000008068	gar1	53	91.228	ENSVVUG00000017612	GAR1	57	90.991	Vulpes_vulpes
ENSFHEG00000008068	gar1	50	87.736	ENSXETG00000024114	gar1	51	85.714	Xenopus_tropicalis
ENSFHEG00000008068	gar1	99	94.860	ENSXCOG00000014843	GAR1	90	94.860	Xiphophorus_couchianus