EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSFHEG00000008186 (Gene tree)
Gene ID
105935109
Gene Symbol
pabpc1b
Alias
-
Full Name
polyadenylate-binding protein 1
Gene Type
protein_coding
Species
Fundulus_heteroclitus
Status
putative
Strand
Minus strand
Length
13566 bases
Position
chrKN811447.1:4230178-4243743
Accession
105935109
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSFHEP00000007110PABPPF00658.185.4e-3211
ENSFHEP00000025775PABPPF00658.185.4e-3211
ENSFHEP00000007110RRM_5PF13893.61.3e-0711
ENSFHEP00000025775RRM_5PF13893.61.3e-0711
ENSFHEP00000007110RRM_1PF00076.224.9e-9014
ENSFHEP00000007110RRM_1PF00076.224.9e-9024
ENSFHEP00000007110RRM_1PF00076.224.9e-9034
ENSFHEP00000007110RRM_1PF00076.224.9e-9044
ENSFHEP00000025775RRM_1PF00076.224.9e-9014
ENSFHEP00000025775RRM_1PF00076.224.9e-9024
ENSFHEP00000025775RRM_1PF00076.224.9e-9034
ENSFHEP00000025775RRM_1PF00076.224.9e-9044
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSFHET00000004377-6114XM_021322935ENSFHEP00000025775634 (aa)XP_021178610A0A146VNZ4
ENSFHET00000004365-6450XM_012875356ENSFHEP00000007110634 (aa)XP_012730810A0A146VNZ4
Gene Model
Click here to download ENSFHEG00000008186's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000008186's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSFHEG00000008186pabpc1b7136.986ENSFHEG00000021947celf3b6236.986
ENSFHEG00000008186pabpc1b9976.862ENSFHEG00000007548pabpc410076.636
ENSFHEG00000008186pabpc1b6030.921ENSFHEG00000010307ELAVL28531.126
ENSFHEG00000008186pabpc1b6240.845ENSFHEG00000012578rbm195940.845
ENSFHEG00000008186pabpc1b5936.145ENSFHEG00000004530elavl48136.145
ENSFHEG00000008186pabpc1b6431.492ENSFHEG00000002832tia1l8131.492
ENSFHEG00000008186pabpc1b9871.383ENSFHEG00000003398pabpc1l9970.794
ENSFHEG00000008186pabpc1b5136.047ENSFHEG00000007136-5136.047
ENSFHEG00000008186pabpc1b5631.928ENSFHEG00000018000ncl6031.928
ENSFHEG00000008186pabpc1b10089.498ENSFHEG00000018979pabpc1a10089.342
ENSFHEG00000008186pabpc1b5136.047ENSFHEG00000010537-5836.047
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSFHEG00000008186pabpc1b5879.082ENSG00000186288PABPC1L2A9879.082Homo_sapiens
ENSFHEG00000008186pabpc1b5879.082ENSG00000184388PABPC1L2B9879.082Homo_sapiens
ENSFHEG00000008186pabpc1b10089.655ENSAPOG00000015105pabpc1a10089.185Acanthochromis_polyacanthus
ENSFHEG00000008186pabpc1b10094.479ENSAPOG00000017776pabpc1b10094.479Acanthochromis_polyacanthus
ENSFHEG00000008186pabpc1b5879.082ENSAMEG00000019441-9879.082Ailuropoda_melanoleuca
ENSFHEG00000008186pabpc1b10087.809ENSACIG00000018366pabpc1b10086.883Amphilophus_citrinellus
ENSFHEG00000008186pabpc1b10089.498ENSACIG00000004685pabpc1a10089.342Amphilophus_citrinellus
ENSFHEG00000008186pabpc1b10089.342ENSAOCG00000011656pabpc1a10089.185Amphiprion_ocellaris
ENSFHEG00000008186pabpc1b10094.322ENSAOCG00000019839pabpc1b10094.322Amphiprion_ocellaris
ENSFHEG00000008186pabpc1b10089.342ENSAPEG00000006963pabpc1a10089.185Amphiprion_percula
ENSFHEG00000008186pabpc1b10094.322ENSAPEG00000010435pabpc1b10094.322Amphiprion_percula
ENSFHEG00000008186pabpc1b10093.711ENSATEG00000012917pabpc1b10093.711Anabas_testudineus
ENSFHEG00000008186pabpc1b10089.185ENSATEG00000024852pabpc1a10089.028Anabas_testudineus
ENSFHEG00000008186pabpc1b5879.082ENSANAG00000019429-9879.082Aotus_nancymaae
ENSFHEG00000008186pabpc1b5879.082ENSANAG00000019431-9879.082Aotus_nancymaae
ENSFHEG00000008186pabpc1b10092.902ENSACLG00000014335pabpc1b10092.902Astatotilapia_calliptera
ENSFHEG00000008186pabpc1b9991.076ENSACLG00000009399pabpc1a10092.661Astatotilapia_calliptera
ENSFHEG00000008186pabpc1b10092.126ENSAMXG00000008599pabpc1b10091.654Astyanax_mexicanus
ENSFHEG00000008186pabpc1b5976.077ENSBTAG00000052491-9876.077Bos_taurus
ENSFHEG00000008186pabpc1b5978.049ENSBTAG00000050902-9878.049Bos_taurus
ENSFHEG00000008186pabpc1b5879.082ENSCJAG00000041326-9879.082Callithrix_jacchus
ENSFHEG00000008186pabpc1b5978.049ENSCAFG00020002052-9878.049Canis_lupus_dingo
ENSFHEG00000008186pabpc1b5879.082ENSCHIG00000006283-9879.082Capra_hircus
ENSFHEG00000008186pabpc1b5879.082ENSCHIG00000011138-9879.082Capra_hircus
ENSFHEG00000008186pabpc1b5879.082ENSTSYG00000001775-9879.082Carlito_syrichta
ENSFHEG00000008186pabpc1b5879.082ENSCPOG00000009525-9879.082Cavia_porcellus
ENSFHEG00000008186pabpc1b5879.082ENSCCAG00000031524-9879.082Cebus_capucinus
ENSFHEG00000008186pabpc1b5879.082ENSCATG00000043125-9879.082Cercocebus_atys
ENSFHEG00000008186pabpc1b5879.082ENSCATG00000042826-9879.082Cercocebus_atys
ENSFHEG00000008186pabpc1b5878.061ENSCLAG00000017409-9878.061Chinchilla_lanigera
ENSFHEG00000008186pabpc1b5878.061ENSCLAG00000017412-9878.061Chinchilla_lanigera
ENSFHEG00000008186pabpc1b5879.082ENSCSAG00000000102-9879.082Chlorocebus_sabaeus
ENSFHEG00000008186pabpc1b5880.110ENSCGRG00001023387-9677.949Cricetulus_griseus_chok1gshd
ENSFHEG00000008186pabpc1b10090.694ENSCSEG00000015241-10090.694Cynoglossus_semilaevis
ENSFHEG00000008186pabpc1b9989.134ENSCSEG00000013324pabpc1a10088.976Cynoglossus_semilaevis
ENSFHEG00000008186pabpc1b10094.803ENSCVAG00000005489pabpc1b10094.803Cyprinodon_variegatus
ENSFHEG00000008186pabpc1b10089.028ENSCVAG00000021872pabpc1a10088.871Cyprinodon_variegatus
ENSFHEG00000008186pabpc1b10090.094ENSDARG00000017219pabpc1a10089.465Danio_rerio
ENSFHEG00000008186pabpc1b10092.126ENSDARG00000021140pabpc1b10092.126Danio_rerio
ENSFHEG00000008186pabpc1b5879.894ENSDNOG00000030926-9877.551Dasypus_novemcinctus
ENSFHEG00000008186pabpc1b5877.551ENSDORG00000011362-9877.551Dipodomys_ordii
ENSFHEG00000008186pabpc1b5977.670ENSEASG00005010399-9877.670Equus_asinus_asinus
ENSFHEG00000008186pabpc1b5977.670ENSECAG00000002620-9877.670Equus_caballus
ENSFHEG00000008186pabpc1b5975.000ENSEEUG00000008203-9875.000Erinaceus_europaeus
ENSFHEG00000008186pabpc1b5959.052ENSELUG00000005389-9759.052Esox_lucius
ENSFHEG00000008186pabpc1b9989.937ENSELUG00000003614pabpc1a10089.780Esox_lucius
ENSFHEG00000008186pabpc1b10091.052ENSELUG00000015062-10091.052Esox_lucius
ENSFHEG00000008186pabpc1b5879.082ENSFCAG00000039701-9879.082Felis_catus
ENSFHEG00000008186pabpc1b5879.082ENSFDAG00000005484-9879.082Fukomys_damarensis
ENSFHEG00000008186pabpc1b9988.080ENSGMOG00000013448pabpc1a9988.080Gadus_morhua
ENSFHEG00000008186pabpc1b10083.022ENSGMOG00000002448-10083.022Gadus_morhua
ENSFHEG00000008186pabpc1b10089.498ENSGAFG00000019750pabpc1a10089.185Gambusia_affinis
ENSFHEG00000008186pabpc1b10096.688ENSGAFG00000010193pabpc1b10096.688Gambusia_affinis
ENSFHEG00000008186pabpc1b10089.498ENSGACG00000003572pabpc1a10089.185Gasterosteus_aculeatus
ENSFHEG00000008186pabpc1b10090.781ENSGACG00000003771pabpc1b10090.781Gasterosteus_aculeatus
ENSFHEG00000008186pabpc1b5879.082ENSGGOG00000038606-9879.082Gorilla_gorilla
ENSFHEG00000008186pabpc1b5879.082ENSGGOG00000043933-9879.082Gorilla_gorilla
ENSFHEG00000008186pabpc1b9991.076ENSHBUG00000020487pabpc1a10092.661Haplochromis_burtoni
ENSFHEG00000008186pabpc1b10092.902ENSHBUG00000002075pabpc1b10092.902Haplochromis_burtoni
ENSFHEG00000008186pabpc1b5879.082ENSHGLG00000019762-9879.082Heterocephalus_glaber_female
ENSFHEG00000008186pabpc1b5879.082ENSHGLG00000019668-9879.082Heterocephalus_glaber_female
ENSFHEG00000008186pabpc1b5879.082ENSHGLG00100020854-9879.082Heterocephalus_glaber_male
ENSFHEG00000008186pabpc1b10089.028ENSHCOG00000013502pabpc1a10088.871Hippocampus_comes
ENSFHEG00000008186pabpc1b9876.586ENSHCOG00000003175pabpc1b9981.915Hippocampus_comes
ENSFHEG00000008186pabpc1b10086.457ENSIPUG00000010791-10086.299Ictalurus_punctatus
ENSFHEG00000008186pabpc1b10088.504ENSIPUG00000008848pabpc1a10088.346Ictalurus_punctatus
ENSFHEG00000008186pabpc1b7455.224ENSIPUG00000018724-7655.224Ictalurus_punctatus
ENSFHEG00000008186pabpc1b7455.324ENSIPUG00000021244-6555.324Ictalurus_punctatus
ENSFHEG00000008186pabpc1b5879.592ENSSTOG00000022096-9879.592Ictidomys_tridecemlineatus
ENSFHEG00000008186pabpc1b5879.592ENSSTOG00000026028-9879.592Ictidomys_tridecemlineatus
ENSFHEG00000008186pabpc1b5878.571ENSJJAG00000007037-9878.571Jaculus_jaculus
ENSFHEG00000008186pabpc1b10093.375ENSKMAG00000008049pabpc1b10093.218Kryptolebias_marmoratus
ENSFHEG00000008186pabpc1b10089.342ENSKMAG00000000605pabpc1a10089.185Kryptolebias_marmoratus
ENSFHEG00000008186pabpc1b10093.060ENSLBEG00000026845pabpc1b10093.060Labrus_bergylta
ENSFHEG00000008186pabpc1b10089.655ENSLBEG00000024002-10089.342Labrus_bergylta
ENSFHEG00000008186pabpc1b5878.462ENSLAFG00000023096-9878.462Loxodonta_africana
ENSFHEG00000008186pabpc1b5878.680ENSMFAG00000028878-9878.680Macaca_fascicularis
ENSFHEG00000008186pabpc1b5879.082ENSMMUG00000039929-9879.082Macaca_mulatta
ENSFHEG00000008186pabpc1b5879.082ENSMMUG00000009740-9879.082Macaca_mulatta
ENSFHEG00000008186pabpc1b5879.082ENSMMUG00000037681-9879.082Macaca_mulatta
ENSFHEG00000008186pabpc1b5879.082ENSMNEG00000037732-9879.082Macaca_nemestrina
ENSFHEG00000008186pabpc1b5879.082ENSMLEG00000027495-9879.082Mandrillus_leucophaeus
ENSFHEG00000008186pabpc1b10094.164ENSMAMG00000014610pabpc1b10094.164Mastacembelus_armatus
ENSFHEG00000008186pabpc1b9990.160ENSMAMG00000004502-10090.160Mastacembelus_armatus
ENSFHEG00000008186pabpc1b9991.076ENSMZEG00005025416pabpc1a10092.661Maylandia_zebra
ENSFHEG00000008186pabpc1b10092.902ENSMZEG00005026745pabpc1b10092.902Maylandia_zebra
ENSFHEG00000008186pabpc1b5879.082ENSMICG00000047642-9879.082Microcebus_murinus
ENSFHEG00000008186pabpc1b10087.382ENSMMOG00000018009pabpc1b10087.066Mola_mola
ENSFHEG00000008186pabpc1b9989.245ENSMMOG00000018044pabpc1a10089.245Mola_mola
ENSFHEG00000008186pabpc1b9873.089ENSMODG00000013156-9873.280Monodelphis_domestica
ENSFHEG00000008186pabpc1b9866.507ENSMODG00000015024-9866.454Monodelphis_domestica
ENSFHEG00000008186pabpc1b10088.871ENSMALG00000013020-10088.871Monopterus_albus
ENSFHEG00000008186pabpc1b10088.013ENSMALG00000006066pabpc1b10088.170Monopterus_albus
ENSFHEG00000008186pabpc1b5881.421ENSNGAG00000012688-9878.571Nannospalax_galili
ENSFHEG00000008186pabpc1b9991.076ENSNBRG00000003068-10092.661Neolamprologus_brichardi
ENSFHEG00000008186pabpc1b10092.744ENSNBRG00000013737pabpc1b10092.744Neolamprologus_brichardi
ENSFHEG00000008186pabpc1b5879.082ENSNLEG00000018128-9879.082Nomascus_leucogenys
ENSFHEG00000008186pabpc1b5878.571ENSODEG00000018540-9878.571Octodon_degus
ENSFHEG00000008186pabpc1b10092.744ENSONIG00000002717pabpc1b10092.744Oreochromis_niloticus
ENSFHEG00000008186pabpc1b10089.342ENSONIG00000006871-10089.185Oreochromis_niloticus
ENSFHEG00000008186pabpc1b5879.082ENSOCUG00000002565-9879.082Oryctolagus_cuniculus
ENSFHEG00000008186pabpc1b9992.874ENSORLG00000002691pabpc1a9694.595Oryzias_latipes
ENSFHEG00000008186pabpc1b10086.120ENSORLG00000003008-10085.174Oryzias_latipes
ENSFHEG00000008186pabpc1b10089.028ENSORLG00020022398pabpc1a10088.871Oryzias_latipes_hni
ENSFHEG00000008186pabpc1b10086.120ENSORLG00020022259-10085.174Oryzias_latipes_hni
ENSFHEG00000008186pabpc1b10086.435ENSORLG00015010932-10085.489Oryzias_latipes_hsok
ENSFHEG00000008186pabpc1b10088.871ENSORLG00015013633pabpc110088.715Oryzias_latipes_hsok
ENSFHEG00000008186pabpc1b10089.185ENSOMEG00000020219pabpc1a10089.028Oryzias_melastigma
ENSFHEG00000008186pabpc1b9984.211ENSOMEG00000013627pabpc1b10084.211Oryzias_melastigma
ENSFHEG00000008186pabpc1b5879.082ENSOGAG00000026047-9879.082Otolemur_garnettii
ENSFHEG00000008186pabpc1b5879.082ENSOGAG00000029513-9879.082Otolemur_garnettii
ENSFHEG00000008186pabpc1b5879.082ENSOARG00000005943-9879.082Ovis_aries
ENSFHEG00000008186pabpc1b5879.082ENSPPAG00000012920-9879.082Pan_paniscus
ENSFHEG00000008186pabpc1b5879.082ENSPPRG00000011804-9879.082Panthera_pardus
ENSFHEG00000008186pabpc1b5879.082ENSPPRG00000011809-9879.082Panthera_pardus
ENSFHEG00000008186pabpc1b5879.082ENSPTRG00000028252-9879.082Pan_troglodytes
ENSFHEG00000008186pabpc1b5879.082ENSPANG00000011549-9879.082Papio_anubis
ENSFHEG00000008186pabpc1b10093.386ENSPKIG00000005676pabpc1b10093.071Paramormyrops_kingsleyae
ENSFHEG00000008186pabpc1b7092.601ENSPMGG00000022487pabpc1a9292.601Periophthalmus_magnuspinnatus
ENSFHEG00000008186pabpc1b7093.946ENSPMGG00000023134-9793.946Periophthalmus_magnuspinnatus
ENSFHEG00000008186pabpc1b9971.860ENSPCIG00000016995-5471.292Phascolarctos_cinereus
ENSFHEG00000008186pabpc1b10088.154ENSPFOG00000010815pabpc1a10087.982Poecilia_formosa
ENSFHEG00000008186pabpc1b10097.003ENSPFOG00000005917pabpc1b10097.003Poecilia_formosa
ENSFHEG00000008186pabpc1b10097.319ENSPLAG00000001388pabpc1b10097.319Poecilia_latipinna
ENSFHEG00000008186pabpc1b10089.655ENSPLAG00000004114pabpc1a10089.498Poecilia_latipinna
ENSFHEG00000008186pabpc1b10089.655ENSPMEG00000001334pabpc1a10089.498Poecilia_mexicana
ENSFHEG00000008186pabpc1b10097.003ENSPMEG00000014399pabpc1b10097.003Poecilia_mexicana
ENSFHEG00000008186pabpc1b9991.076ENSPREG00000019595pabpc1a10092.661Poecilia_reticulata
ENSFHEG00000008186pabpc1b10097.319ENSPREG00000010911pabpc1b10097.319Poecilia_reticulata
ENSFHEG00000008186pabpc1b5879.082ENSPPYG00000020468-9879.082Pongo_abelii
ENSFHEG00000008186pabpc1b5979.082ENSPCAG00000005308-9879.082Procavia_capensis
ENSFHEG00000008186pabpc1b5879.592ENSPCOG00000026349-9879.592Propithecus_coquereli
ENSFHEG00000008186pabpc1b5979.487ENSPVAG00000016117-9879.487Pteropus_vampyrus
ENSFHEG00000008186pabpc1b10092.902ENSPNYG00000012578pabpc1b10092.902Pundamilia_nyererei
ENSFHEG00000008186pabpc1b10089.498ENSPNYG00000005192pabpc1a10089.342Pundamilia_nyererei
ENSFHEG00000008186pabpc1b10089.623ENSPNAG00000028408pabpc1a10088.994Pygocentrus_nattereri
ENSFHEG00000008186pabpc1b10092.283ENSPNAG00000024626pabpc1b10091.811Pygocentrus_nattereri
ENSFHEG00000008186pabpc1b5879.082ENSRBIG00000027173-9879.082Rhinopithecus_bieti
ENSFHEG00000008186pabpc1b9991.017ENSRBIG00000028738-9491.017Rhinopithecus_bieti
ENSFHEG00000008186pabpc1b5879.082ENSRROG00000017404-9879.082Rhinopithecus_roxellana
ENSFHEG00000008186pabpc1b9863.987ENSSHAG00000000511-10063.666Sarcophilus_harrisii
ENSFHEG00000008186pabpc1b10092.114ENSSFOG00015002752-10092.114Scleropages_formosus
ENSFHEG00000008186pabpc1b6979.191ENSSFOG00015019668-9179.191Scleropages_formosus
ENSFHEG00000008186pabpc1b10089.921ENSSFOG00015006662pabpc1a10089.921Scleropages_formosus
ENSFHEG00000008186pabpc1b10093.375ENSSMAG00000006869pabpc1b10093.375Scophthalmus_maximus
ENSFHEG00000008186pabpc1b10089.342ENSSMAG00000010803pabpc1a10089.028Scophthalmus_maximus
ENSFHEG00000008186pabpc1b10092.271ENSSDUG00000011965pabpc1b10092.271Seriola_dumerili
ENSFHEG00000008186pabpc1b10088.871ENSSDUG00000006675pabpc1a10088.715Seriola_dumerili
ENSFHEG00000008186pabpc1b10088.871ENSSLDG00000011661pabpc1a10088.715Seriola_lalandi_dorsalis
ENSFHEG00000008186pabpc1b10093.897ENSSLDG00000014156pabpc1b10093.897Seriola_lalandi_dorsalis
ENSFHEG00000008186pabpc1b10094.637ENSSPAG00000019265pabpc1b10094.637Stegastes_partitus
ENSFHEG00000008186pabpc1b10089.498ENSSPAG00000014453-10089.342Stegastes_partitus
ENSFHEG00000008186pabpc1b5879.082ENSSSCG00000036336-9879.082Sus_scrofa
ENSFHEG00000008186pabpc1b5879.082ENSSSCG00000032167-9879.082Sus_scrofa
ENSFHEG00000008186pabpc1b10089.028ENSTRUG00000011577-10089.028Takifugu_rubripes
ENSFHEG00000008186pabpc1b10090.079ENSTRUG00000003767-10089.449Takifugu_rubripes
ENSFHEG00000008186pabpc1b10090.125ENSTNIG00000009153pabpc1b10089.812Tetraodon_nigroviridis
ENSFHEG00000008186pabpc1b10086.090ENSTNIG00000013307pabpc1a10086.090Tetraodon_nigroviridis
ENSFHEG00000008186pabpc1b5879.082ENSTTRG00000013181-9879.082Tursiops_truncatus
ENSFHEG00000008186pabpc1b5879.082ENSUAMG00000008089-9879.082Ursus_americanus
ENSFHEG00000008186pabpc1b9754.309ENSUMAG00000023926-8968.785Ursus_maritimus
ENSFHEG00000008186pabpc1b5879.082ENSUMAG00000003364-9879.082Ursus_maritimus
ENSFHEG00000008186pabpc1b5978.000ENSVVUG00000015892-9778.000Vulpes_vulpes
ENSFHEG00000008186pabpc1b9945.657ENSXETG00000015439-10045.312Xenopus_tropicalis
ENSFHEG00000008186pabpc1b10090.852ENSXCOG00000019901pabpc1b10090.852Xiphophorus_couchianus
ENSFHEG00000008186pabpc1b10086.435ENSXCOG00000017066pabpc1a10086.164Xiphophorus_couchianus
ENSFHEG00000008186pabpc1b10089.498ENSXMAG00000002555pabpc1a10089.342Xiphophorus_maculatus
ENSFHEG00000008186pabpc1b10096.845ENSXMAG00000003753pabpc1b10096.845Xiphophorus_maculatus

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