EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000008211 (Gene tree)
Gene ID: 105935106
Gene Symbol: sf3b4
Alias: chunp6902|fb36a04|wu:fb36a04
Full Name: limb and CNS expressed 1 like
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 24223 bases
Position: chrKN811447.1:4193855-4218077
Accession: 105935106
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000007131	RRM_1	PF00076.22	1.1e-38	1	2
ENSFHEP00000007131	RRM_1	PF00076.22	1.1e-38	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000004347	-	4778	XM_012875351	ENSFHEP00000025789	357 (aa)	XP_012730805	UPI000644A844
ENSFHET00000004337	-	2759	-	ENSFHEP00000007131	689 (aa)	-	-

Gene Model

Click here to download ENSFHEG00000008211's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000008211's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000008211	sf3b4	57	96.173	ENSCVAG00000005536	sf3b4	100	96.173	Cyprinodon_variegatus
ENSFHEG00000008211	sf3b4	50	87.356	ENSELUG00000012876	sf3b4	60	97.942	Esox_lucius
ENSFHEG00000008211	sf3b4	52	63.421	ENSGGOG00000038845	-	54	89.524	Gorilla_gorilla
ENSFHEG00000008211	sf3b4	55	89.974	ENSKMAG00000008154	sf3b4	62	98.765	Kryptolebias_marmoratus
ENSFHEG00000008211	sf3b4	51	60.383	ENSMFAG00000039067	-	60	77.232	Macaca_fascicularis
ENSFHEG00000008211	sf3b4	56	66.496	ENSNLEG00000000537	-	60	86.498	Nomascus_leucogenys
ENSFHEG00000008211	sf3b4	57	48.592	ENSNLEG00000009693	-	98	48.592	Nomascus_leucogenys
ENSFHEG00000008211	sf3b4	52	58.602	ENSODEG00000008916	-	55	76.415	Octodon_degus
ENSFHEG00000008211	sf3b4	50	87.679	ENSORLG00000003062	sf3b4	61	97.468	Oryzias_latipes
ENSFHEG00000008211	sf3b4	51	95.977	ENSPLAG00000001401	sf3b4	95	95.977	Poecilia_latipinna
ENSFHEG00000008211	sf3b4	82	93.640	ENSPMEG00000014452	sf3b4	78	93.704	Poecilia_mexicana
ENSFHEG00000008211	sf3b4	51	93.352	ENSPREG00000011076	sf3b4	89	93.352	Poecilia_reticulata
ENSFHEG00000008211	sf3b4	53	56.510	ENSRROG00000028213	-	58	72.489	Rhinopithecus_roxellana