EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000008424 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: spalt like transcription factor 3
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 12805 bases
Position: chrKN811406.1:3159489-3172293
Accession: 105933437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000025880	zf-C2H2	PF00096.26	6.7e-26	1	5
ENSFHEP00000025880	zf-C2H2	PF00096.26	6.7e-26	2	5
ENSFHEP00000025880	zf-C2H2	PF00096.26	6.7e-26	3	5
ENSFHEP00000025880	zf-C2H2	PF00096.26	6.7e-26	4	5
ENSFHEP00000025880	zf-C2H2	PF00096.26	6.7e-26	5	5
ENSFHEP00000007295	zf-C2H2	PF00096.26	5.3e-25	1	5
ENSFHEP00000007295	zf-C2H2	PF00096.26	5.3e-25	2	5
ENSFHEP00000007295	zf-C2H2	PF00096.26	5.3e-25	3	5
ENSFHEP00000007295	zf-C2H2	PF00096.26	5.3e-25	4	5
ENSFHEP00000007295	zf-C2H2	PF00096.26	5.3e-25	5	5
ENSFHEP00000025880	zf-met	PF12874.7	8.4e-15	1	1
ENSFHEP00000007295	zf-met	PF12874.7	5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000004072	-	3771	XM_012872978	ENSFHEP00000007295	1256 (aa)	XP_012728432	-
ENSFHET00000004114	-	2973	-	ENSFHEP00000025880	990 (aa)	-	-

Gene Model

Click here to download ENSFHEG00000008424's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000008424's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000008424	-	83	63.462	ENSFHEG00000014187	sall4	92	63.462
ENSFHEG00000008424	-	100	64.151	ENSFHEG00000012579	sall1a	74	63.415

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000008424	-	99	61.538	ENSG00000103449	SALL1	75	63.462	Homo_sapiens
ENSFHEG00000008424	-	100	63.265	ENSAPOG00000022764	sall1a	79	63.415	Acanthochromis_polyacanthus
ENSFHEG00000008424	-	98	51.253	ENSAMEG00000006817	SALL1	79	63.462	Ailuropoda_melanoleuca
ENSFHEG00000008424	-	100	63.679	ENSACIG00000004231	sall1a	71	63.415	Amphilophus_citrinellus
ENSFHEG00000008424	-	100	63.265	ENSAOCG00000002800	sall1a	79	63.415	Amphiprion_ocellaris
ENSFHEG00000008424	-	100	63.265	ENSAPEG00000010179	sall1a	79	63.415	Amphiprion_percula
ENSFHEG00000008424	-	99	63.265	ENSATEG00000003006	sall1a	76	63.265	Anabas_testudineus
ENSFHEG00000008424	-	100	63.265	ENSAPLG00000003356	SALL1	74	63.265	Anas_platyrhynchos
ENSFHEG00000008424	-	97	61.538	ENSACAG00000014399	SALL1	73	61.538	Anolis_carolinensis
ENSFHEG00000008424	-	99	61.538	ENSANAG00000027238	SALL1	72	63.462	Aotus_nancymaae
ENSFHEG00000008424	-	100	63.265	ENSACLG00000017148	sall1a	75	63.265	Astatotilapia_calliptera
ENSFHEG00000008424	-	100	63.265	ENSAMXG00000018599	sall1a	74	62.500	Astyanax_mexicanus
ENSFHEG00000008424	-	99	63.265	ENSAMXG00000017702	sall1b	68	63.265	Astyanax_mexicanus
ENSFHEG00000008424	-	99	61.538	ENSBTAG00000008544	SALL1	79	63.462	Bos_taurus
ENSFHEG00000008424	-	93	63.462	ENSCJAG00000001740	SALL1	72	63.462	Callithrix_jacchus
ENSFHEG00000008424	-	98	63.462	ENSCAFG00000009755	SALL1	93	61.538	Canis_familiaris
ENSFHEG00000008424	-	98	63.462	ENSCAFG00020002842	SALL1	93	61.538	Canis_lupus_dingo
ENSFHEG00000008424	-	99	61.538	ENSCHIG00000026074	SALL1	76	63.462	Capra_hircus
ENSFHEG00000008424	-	99	61.538	ENSTSYG00000029464	SALL1	75	63.462	Carlito_syrichta
ENSFHEG00000008424	-	94	63.462	ENSCPOG00000006564	SALL1	75	63.462	Cavia_porcellus
ENSFHEG00000008424	-	99	61.538	ENSCCAG00000001639	SALL1	74	60.465	Cebus_capucinus
ENSFHEG00000008424	-	99	61.538	ENSCATG00000004982	SALL1	75	63.462	Cercocebus_atys
ENSFHEG00000008424	-	99	61.538	ENSCLAG00000006380	SALL1	76	63.462	Chinchilla_lanigera
ENSFHEG00000008424	-	99	61.538	ENSCSAG00000005319	SALL1	75	63.265	Chlorocebus_sabaeus
ENSFHEG00000008424	-	100	61.538	ENSCPBG00000015924	SALL1	75	63.462	Chrysemys_picta_bellii
ENSFHEG00000008424	-	99	61.538	ENSCANG00000036664	SALL1	75	63.462	Colobus_angolensis_palliatus
ENSFHEG00000008424	-	99	64.141	ENSCGRG00001023314	-	69	61.538	Cricetulus_griseus_chok1gshd
ENSFHEG00000008424	-	97	64.141	ENSCGRG00000009496	Sall1	70	61.538	Cricetulus_griseus_crigri
ENSFHEG00000008424	-	99	64.796	ENSCSEG00000009349	sall1a	74	63.265	Cynoglossus_semilaevis
ENSFHEG00000008424	-	90	80.303	ENSCVAG00000020513	sall1a	72	80.303	Cyprinodon_variegatus
ENSFHEG00000008424	-	85	63.462	ENSDARG00000075891	sall1b	84	63.462	Danio_rerio
ENSFHEG00000008424	-	94	64.103	ENSDARG00000074319	sall1a	74	64.103	Danio_rerio
ENSFHEG00000008424	-	99	61.538	ENSDNOG00000016413	SALL1	76	63.462	Dasypus_novemcinctus
ENSFHEG00000008424	-	97	61.538	ENSETEG00000015150	SALL1	75	63.462	Echinops_telfairi
ENSFHEG00000008424	-	89	84.483	ENSEBUG00000011732	SALL1	67	84.483	Eptatretus_burgeri
ENSFHEG00000008424	-	67	65.957	ENSEBUG00000008798	SALL1	64	63.265	Eptatretus_burgeri
ENSFHEG00000008424	-	71	61.538	ENSEASG00005014602	SALL1	76	63.462	Equus_asinus_asinus
ENSFHEG00000008424	-	85	63.462	ENSECAG00000011334	SALL1	72	63.462	Equus_caballus
ENSFHEG00000008424	-	97	61.538	ENSEEUG00000002014	SALL1	71	61.538	Erinaceus_europaeus
ENSFHEG00000008424	-	75	59.615	ENSELUG00000017774	-	88	59.615	Esox_lucius
ENSFHEG00000008424	-	100	63.265	ENSELUG00000006159	sall1a	85	63.265	Esox_lucius
ENSFHEG00000008424	-	95	54.545	ENSFCAG00000024654	SALL1	76	61.538	Felis_catus
ENSFHEG00000008424	-	100	63.265	ENSFALG00000000074	SALL1	74	63.265	Ficedula_albicollis
ENSFHEG00000008424	-	100	63.265	ENSGMOG00000006103	sall1a	74	63.415	Gadus_morhua
ENSFHEG00000008424	-	97	66.935	ENSGMOG00000013383	-	76	59.184	Gadus_morhua
ENSFHEG00000008424	-	100	63.265	ENSGALG00000039238	SALL1	74	63.265	Gallus_gallus
ENSFHEG00000008424	-	100	63.265	ENSGAFG00000009964	sall1a	74	63.415	Gambusia_affinis
ENSFHEG00000008424	-	99	63.265	ENSGACG00000016702	sall1a	74	63.265	Gasterosteus_aculeatus
ENSFHEG00000008424	-	100	61.538	ENSGAGG00000013979	SALL1	75	63.462	Gopherus_agassizii
ENSFHEG00000008424	-	99	61.538	ENSGGOG00000000663	SALL1	75	63.462	Gorilla_gorilla
ENSFHEG00000008424	-	100	63.265	ENSHBUG00000022005	sall1a	75	63.265	Haplochromis_burtoni
ENSFHEG00000008424	-	99	61.538	ENSHGLG00000004288	-	76	63.462	Heterocephalus_glaber_female
ENSFHEG00000008424	-	99	61.538	ENSHGLG00100017496	SALL1	76	63.462	Heterocephalus_glaber_male
ENSFHEG00000008424	-	86	63.265	ENSHCOG00000000974	sall1a	73	63.265	Hippocampus_comes
ENSFHEG00000008424	-	100	63.265	ENSIPUG00000016265	SALL1	74	64.103	Ictalurus_punctatus
ENSFHEG00000008424	-	86	61.224	ENSIPUG00000022928	sall1b	82	61.224	Ictalurus_punctatus
ENSFHEG00000008424	-	99	64.646	ENSSTOG00000020885	SALL1	69	61.538	Ictidomys_tridecemlineatus
ENSFHEG00000008424	-	100	63.265	ENSKMAG00000016681	sall1a	73	65.854	Kryptolebias_marmoratus
ENSFHEG00000008424	-	96	72.973	ENSLBEG00000012207	sall1a	71	72.973	Labrus_bergylta
ENSFHEG00000008424	-	84	61.538	ENSLACG00000014018	-	67	59.615	Latimeria_chalumnae
ENSFHEG00000008424	-	92	61.538	ENSLACG00000003556	SALL1	98	61.538	Latimeria_chalumnae
ENSFHEG00000008424	-	100	56.134	ENSLOCG00000007283	sall1b	69	61.538	Lepisosteus_oculatus
ENSFHEG00000008424	-	94	63.462	ENSLAFG00000015251	SALL1	75	63.462	Loxodonta_africana
ENSFHEG00000008424	-	99	61.538	ENSMFAG00000003298	SALL1	75	63.462	Macaca_fascicularis
ENSFHEG00000008424	-	89	63.462	ENSMMUG00000017200	SALL1	74	63.462	Macaca_mulatta
ENSFHEG00000008424	-	89	63.462	ENSMNEG00000034770	SALL1	74	63.462	Macaca_nemestrina
ENSFHEG00000008424	-	99	61.538	ENSMLEG00000036406	SALL1	75	63.462	Mandrillus_leucophaeus
ENSFHEG00000008424	-	99	63.265	ENSMAMG00000004164	sall1a	76	63.265	Mastacembelus_armatus
ENSFHEG00000008424	-	100	63.265	ENSMZEG00005006479	sall1a	75	63.265	Maylandia_zebra
ENSFHEG00000008424	-	97	63.265	ENSMGAG00000004704	SALL1	76	63.265	Meleagris_gallopavo
ENSFHEG00000008424	-	99	63.265	ENSMAUG00000019093	Sall1	76	63.462	Mesocricetus_auratus
ENSFHEG00000008424	-	99	61.538	ENSMICG00000036486	SALL1	75	61.538	Microcebus_murinus
ENSFHEG00000008424	-	94	58.537	ENSMMOG00000016400	sall1a	74	58.537	Mola_mola
ENSFHEG00000008424	-	99	61.538	ENSMODG00000013114	SALL1	75	63.462	Monodelphis_domestica
ENSFHEG00000008424	-	99	63.265	ENSMALG00000013400	sall1a	68	63.265	Monopterus_albus
ENSFHEG00000008424	-	99	61.538	MGP_CAROLIEiJ_G0031362	Sall1	75	63.462	Mus_caroli
ENSFHEG00000008424	-	99	61.538	ENSMUSG00000031665	Sall1	75	63.462	Mus_musculus
ENSFHEG00000008424	-	99	62.802	MGP_PahariEiJ_G0022961	Sall1	72	63.462	Mus_pahari
ENSFHEG00000008424	-	99	61.538	MGP_SPRETEiJ_G0032480	Sall1	75	63.462	Mus_spretus
ENSFHEG00000008424	-	96	63.462	ENSMPUG00000003265	SALL1	74	63.462	Mustela_putorius_furo
ENSFHEG00000008424	-	97	61.538	ENSMLUG00000015541	SALL1	76	58.140	Myotis_lucifugus
ENSFHEG00000008424	-	100	63.265	ENSNBRG00000009307	sall1a	75	63.265	Neolamprologus_brichardi
ENSFHEG00000008424	-	95	54.545	ENSNLEG00000001008	SALL1	74	54.545	Nomascus_leucogenys
ENSFHEG00000008424	-	99	63.265	ENSMEUG00000012206	SALL1	75	63.462	Notamacropus_eugenii
ENSFHEG00000008424	-	77	61.538	ENSOPRG00000005645	SALL1	68	63.265	Ochotona_princeps
ENSFHEG00000008424	-	99	61.538	ENSODEG00000003685	SALL1	76	63.462	Octodon_degus
ENSFHEG00000008424	-	100	63.265	ENSONIG00000002831	sall1a	74	63.415	Oreochromis_niloticus
ENSFHEG00000008424	-	95	63.462	ENSOANG00000013399	SALL1	94	73.714	Ornithorhynchus_anatinus
ENSFHEG00000008424	-	100	63.265	ENSORLG00000013827	sall1a	79	65.854	Oryzias_latipes
ENSFHEG00000008424	-	100	63.265	ENSORLG00020020570	sall1a	79	65.854	Oryzias_latipes_hni
ENSFHEG00000008424	-	100	63.265	ENSORLG00015018830	sall1a	79	65.854	Oryzias_latipes_hsok
ENSFHEG00000008424	-	100	63.265	ENSOMEG00000016043	sall1a	79	65.854	Oryzias_melastigma
ENSFHEG00000008424	-	99	61.538	ENSOGAG00000027316	SALL1	75	63.462	Otolemur_garnettii
ENSFHEG00000008424	-	99	53.205	ENSOARG00000017583	SALL1	68	63.462	Ovis_aries
ENSFHEG00000008424	-	97	61.538	ENSPPAG00000035657	SALL1	75	63.462	Pan_paniscus
ENSFHEG00000008424	-	94	53.488	ENSPPAG00000035136	-	75	53.488	Pan_paniscus
ENSFHEG00000008424	-	97	63.462	ENSPPRG00000023283	SALL1	77	63.462	Panthera_pardus
ENSFHEG00000008424	-	72	74.251	ENSPTIG00000013539	-	86	74.096	Panthera_tigris_altaica
ENSFHEG00000008424	-	99	61.538	ENSPTRG00000008108	SALL1	75	63.462	Pan_troglodytes
ENSFHEG00000008424	-	93	53.488	ENSPTRG00000045256	-	73	53.488	Pan_troglodytes
ENSFHEG00000008424	-	99	61.538	ENSPANG00000024176	SALL1	75	63.462	Papio_anubis
ENSFHEG00000008424	-	89	63.265	ENSPKIG00000005383	-	89	63.265	Paramormyrops_kingsleyae
ENSFHEG00000008424	-	100	61.538	ENSPSIG00000008582	SALL1	84	63.462	Pelodiscus_sinensis
ENSFHEG00000008424	-	94	60.976	ENSPMGG00000021788	sall1a	75	60.976	Periophthalmus_magnuspinnatus
ENSFHEG00000008424	-	69	70.312	ENSPMAG00000008148	sall1b	72	63.462	Petromyzon_marinus
ENSFHEG00000008424	-	99	61.538	ENSPCIG00000017840	SALL1	75	63.462	Phascolarctos_cinereus
ENSFHEG00000008424	-	96	63.265	ENSPFOG00000015799	sall1a	72	63.415	Poecilia_formosa
ENSFHEG00000008424	-	100	63.265	ENSPLAG00000022539	sall1a	74	63.415	Poecilia_latipinna
ENSFHEG00000008424	-	100	63.265	ENSPMEG00000020894	sall1a	74	63.415	Poecilia_mexicana
ENSFHEG00000008424	-	100	63.265	ENSPREG00000006802	sall1a	75	63.415	Poecilia_reticulata
ENSFHEG00000008424	-	90	63.830	ENSPPYG00000007345	SALL1	68	63.830	Pongo_abelii
ENSFHEG00000008424	-	85	63.265	ENSPCAG00000008162	SALL1	74	63.265	Procavia_capensis
ENSFHEG00000008424	-	98	63.462	ENSPCOG00000028192	SALL1	77	63.462	Propithecus_coquereli
ENSFHEG00000008424	-	84	61.538	ENSPVAG00000015374	SALL1	98	63.265	Pteropus_vampyrus
ENSFHEG00000008424	-	100	63.265	ENSPNYG00000010865	sall1a	75	63.265	Pundamilia_nyererei
ENSFHEG00000008424	-	74	63.265	ENSPNAG00000007442	sall1b	84	63.265	Pygocentrus_nattereri
ENSFHEG00000008424	-	100	82.258	ENSPNAG00000028248	-	95	82.258	Pygocentrus_nattereri
ENSFHEG00000008424	-	100	63.265	ENSPNAG00000023644	sall1a	73	62.500	Pygocentrus_nattereri
ENSFHEG00000008424	-	99	61.538	ENSRNOG00000013907	Sall1	77	63.462	Rattus_norvegicus
ENSFHEG00000008424	-	89	63.462	ENSRBIG00000015707	SALL1	75	63.462	Rhinopithecus_bieti
ENSFHEG00000008424	-	97	61.538	ENSRROG00000035777	SALL1	74	63.462	Rhinopithecus_roxellana
ENSFHEG00000008424	-	99	61.538	ENSSBOG00000032186	SALL1	74	60.465	Saimiri_boliviensis_boliviensis
ENSFHEG00000008424	-	99	63.265	ENSSHAG00000009477	SALL1	74	63.462	Sarcophilus_harrisii
ENSFHEG00000008424	-	94	61.224	ENSSFOG00015001590	sall1a	86	57.028	Scleropages_formosus
ENSFHEG00000008424	-	100	63.265	ENSSFOG00015020020	sall1a	75	61.538	Scleropages_formosus
ENSFHEG00000008424	-	99	63.265	ENSSMAG00000009160	sall1a	74	63.415	Scophthalmus_maximus
ENSFHEG00000008424	-	60	61.702	ENSSDUG00000000748	sall1b	74	61.702	Seriola_dumerili
ENSFHEG00000008424	-	99	65.816	ENSSDUG00000006507	sall1a	75	63.265	Seriola_dumerili
ENSFHEG00000008424	-	99	65.816	ENSSLDG00000017721	sall1a	74	63.415	Seriola_lalandi_dorsalis
ENSFHEG00000008424	-	94	63.462	ENSSARG00000000661	SALL1	75	63.462	Sorex_araneus
ENSFHEG00000008424	-	94	59.524	ENSSPUG00000000156	SALL1	73	63.265	Sphenodon_punctatus
ENSFHEG00000008424	-	100	63.265	ENSSPAG00000021615	sall1a	74	63.415	Stegastes_partitus
ENSFHEG00000008424	-	96	63.462	ENSSSCG00000002836	SALL1	75	63.462	Sus_scrofa
ENSFHEG00000008424	-	100	63.265	ENSTGUG00000007514	SALL1	74	63.265	Taeniopygia_guttata
ENSFHEG00000008424	-	59	80.000	ENSTRUG00000008950	sall1a	64	80.000	Takifugu_rubripes
ENSFHEG00000008424	-	79	78.095	ENSTNIG00000004257	sall1a	73	58.182	Tetraodon_nigroviridis
ENSFHEG00000008424	-	83	55.634	ENSTBEG00000002119	-	52	60.784	Tupaia_belangeri
ENSFHEG00000008424	-	85	63.462	ENSUAMG00000023379	-	81	63.830	Ursus_americanus
ENSFHEG00000008424	-	85	63.462	ENSVVUG00000019383	-	91	63.830	Vulpes_vulpes
ENSFHEG00000008424	-	78	59.615	ENSXETG00000017176	sall2	77	59.184	Xenopus_tropicalis
ENSFHEG00000008424	-	100	61.538	ENSXETG00000018417	sall1	73	65.789	Xenopus_tropicalis
ENSFHEG00000008424	-	100	63.265	ENSXMAG00000016273	sall1a	74	63.415	Xiphophorus_maculatus