EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000008444 (Gene tree)
Gene ID: 105930531
Gene Symbol: ddx1
Alias: si:ch211-214k9.2|si:dkey-161f12.1
Full Name: DEAD-box helicase 1
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 9914 bases
Position: chrKN811354.1:1138913-1148826
Accession: 105930531
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000025850	DEAD	PF00270.29	3.9e-73	1	1
ENSFHEP00000007216	DEAD	PF00270.29	4e-73	1	1
ENSFHEP00000007187	DEAD	PF00270.29	7.2e-51	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000004239	-	1941	-	ENSFHEP00000007187	646 (aa)	-	-
ENSFHET00000004183	-	4404	-	ENSFHEP00000025850	734 (aa)	-	-
ENSFHET00000004208	-	4273	XM_012868783	ENSFHEP00000007216	740 (aa)	XP_012724237	UPI0006451B0D

Gene Model

Click here to download ENSFHEG00000008444's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000008444's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000008444	ddx1	53	45.098	ENSFHEG00000015487	-	68	45.098
ENSFHEG00000008444	ddx1	58	50.000	ENSFHEG00000011435	ddx47	71	50.000
ENSFHEG00000008444	ddx1	52	45.098	ENSFHEG00000021202	ddx6	67	45.098
ENSFHEG00000008444	ddx1	53	35.484	ENSFHEG00000019935	ddx4	54	35.484

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000008444	ddx1	100	83.378	ENSG00000079785	DDX1	100	83.378	Homo_sapiens
ENSFHEG00000008444	ddx1	100	91.757	ENSAPOG00000003166	ddx1	100	91.757	Acanthochromis_polyacanthus
ENSFHEG00000008444	ddx1	100	82.473	ENSAMEG00000001071	DDX1	99	82.544	Ailuropoda_melanoleuca
ENSFHEG00000008444	ddx1	100	88.467	ENSACIG00000017422	ddx1	99	91.298	Amphilophus_citrinellus
ENSFHEG00000008444	ddx1	90	90.045	ENSAOCG00000015436	ddx1	95	91.888	Amphiprion_ocellaris
ENSFHEG00000008444	ddx1	100	92.568	ENSAPEG00000007699	ddx1	100	92.568	Amphiprion_percula
ENSFHEG00000008444	ddx1	99	89.329	ENSATEG00000003965	ddx1	98	91.908	Anabas_testudineus
ENSFHEG00000008444	ddx1	100	84.274	ENSAPLG00000011093	DDX1	100	84.274	Anas_platyrhynchos
ENSFHEG00000008444	ddx1	94	84.241	ENSACAG00000011036	DDX1	99	84.241	Anolis_carolinensis
ENSFHEG00000008444	ddx1	100	83.649	ENSANAG00000037912	DDX1	100	83.649	Aotus_nancymaae
ENSFHEG00000008444	ddx1	100	92.098	ENSACLG00000008850	ddx1	99	91.145	Astatotilapia_calliptera
ENSFHEG00000008444	ddx1	100	89.646	ENSAMXG00000002100	ddx1	100	89.595	Astyanax_mexicanus
ENSFHEG00000008444	ddx1	100	83.514	ENSBTAG00000009906	DDX1	100	83.514	Bos_taurus
ENSFHEG00000008444	ddx1	98	47.908	WBGene00021938	Y55F3BR.1	98	47.908	Caenorhabditis_elegans
ENSFHEG00000008444	ddx1	100	83.378	ENSCJAG00000007076	DDX1	100	83.378	Callithrix_jacchus
ENSFHEG00000008444	ddx1	100	83.243	ENSCAFG00000003686	DDX1	100	83.243	Canis_familiaris
ENSFHEG00000008444	ddx1	100	83.243	ENSCAFG00020026083	DDX1	100	83.243	Canis_lupus_dingo
ENSFHEG00000008444	ddx1	100	83.784	ENSCHIG00000011046	DDX1	100	83.784	Capra_hircus
ENSFHEG00000008444	ddx1	100	83.108	ENSTSYG00000002477	-	100	83.108	Carlito_syrichta
ENSFHEG00000008444	ddx1	100	59.610	ENSTSYG00000037396	-	97	61.760	Carlito_syrichta
ENSFHEG00000008444	ddx1	97	65.630	ENSCAPG00000008906	-	93	68.118	Cavia_aperea
ENSFHEG00000008444	ddx1	68	82.869	ENSCPOG00000032467	-	100	82.869	Cavia_porcellus
ENSFHEG00000008444	ddx1	98	78.867	ENSCPOG00000009816	-	96	81.317	Cavia_porcellus
ENSFHEG00000008444	ddx1	100	83.649	ENSCCAG00000030085	DDX1	100	83.649	Cebus_capucinus
ENSFHEG00000008444	ddx1	100	83.514	ENSCATG00000033924	DDX1	100	83.514	Cercocebus_atys
ENSFHEG00000008444	ddx1	100	83.378	ENSCLAG00000005434	DDX1	100	83.378	Chinchilla_lanigera
ENSFHEG00000008444	ddx1	100	83.514	ENSCSAG00000007883	DDX1	100	83.514	Chlorocebus_sabaeus
ENSFHEG00000008444	ddx1	70	87.173	ENSCHOG00000002171	DDX1	70	87.173	Choloepus_hoffmanni
ENSFHEG00000008444	ddx1	100	78.503	ENSCPBG00000013330	DDX1	99	84.084	Chrysemys_picta_bellii
ENSFHEG00000008444	ddx1	100	66.892	ENSCING00000001176	-	100	66.890	Ciona_intestinalis
ENSFHEG00000008444	ddx1	99	61.813	ENSCSAVG00000003028	-	99	61.813	Ciona_savignyi
ENSFHEG00000008444	ddx1	100	83.514	ENSCANG00000031530	DDX1	100	83.514	Colobus_angolensis_palliatus
ENSFHEG00000008444	ddx1	100	82.703	ENSCGRG00001013025	Ddx1	100	82.703	Cricetulus_griseus_chok1gshd
ENSFHEG00000008444	ddx1	100	82.703	ENSCGRG00000000676	Ddx1	100	82.703	Cricetulus_griseus_crigri
ENSFHEG00000008444	ddx1	100	92.916	ENSCSEG00000002630	ddx1	100	92.916	Cynoglossus_semilaevis
ENSFHEG00000008444	ddx1	100	93.460	ENSCVAG00000020927	ddx1	100	93.460	Cyprinodon_variegatus
ENSFHEG00000008444	ddx1	100	87.738	ENSDARG00000032117	ddx1	100	87.738	Danio_rerio
ENSFHEG00000008444	ddx1	100	83.378	ENSDNOG00000006905	DDX1	100	83.378	Dasypus_novemcinctus
ENSFHEG00000008444	ddx1	100	83.243	ENSDORG00000012847	Ddx1	100	83.243	Dipodomys_ordii
ENSFHEG00000008444	ddx1	98	59.508	FBgn0015075	Ddx1	99	59.918	Drosophila_melanogaster
ENSFHEG00000008444	ddx1	100	75.000	ENSETEG00000014259	DDX1	100	75.000	Echinops_telfairi
ENSFHEG00000008444	ddx1	71	73.729	ENSEBUG00000009800	-	99	77.331	Eptatretus_burgeri
ENSFHEG00000008444	ddx1	100	83.243	ENSEASG00005009335	DDX1	92	83.243	Equus_asinus_asinus
ENSFHEG00000008444	ddx1	99	80.000	ENSECAG00000016396	DDX1	100	82.496	Equus_caballus
ENSFHEG00000008444	ddx1	89	81.321	ENSEEUG00000001606	DDX1	89	81.321	Erinaceus_europaeus
ENSFHEG00000008444	ddx1	100	86.505	ENSELUG00000006743	ddx1	100	86.505	Esox_lucius
ENSFHEG00000008444	ddx1	100	83.243	ENSFCAG00000004680	DDX1	100	83.243	Felis_catus
ENSFHEG00000008444	ddx1	100	84.595	ENSFALG00000008696	DDX1	100	84.595	Ficedula_albicollis
ENSFHEG00000008444	ddx1	100	82.838	ENSFDAG00000021305	DDX1	100	82.838	Fukomys_damarensis
ENSFHEG00000008444	ddx1	100	85.868	ENSGMOG00000011300	ddx1	100	85.868	Gadus_morhua
ENSFHEG00000008444	ddx1	100	84.189	ENSGALG00000016461	DDX1	100	84.189	Gallus_gallus
ENSFHEG00000008444	ddx1	100	94.865	ENSGAFG00000004706	ddx1	100	94.865	Gambusia_affinis
ENSFHEG00000008444	ddx1	100	90.135	ENSGACG00000011162	ddx1	100	90.135	Gasterosteus_aculeatus
ENSFHEG00000008444	ddx1	100	84.189	ENSGAGG00000021020	DDX1	100	84.189	Gopherus_agassizii
ENSFHEG00000008444	ddx1	100	83.378	ENSGGOG00000012482	DDX1	100	83.378	Gorilla_gorilla
ENSFHEG00000008444	ddx1	100	91.962	ENSHBUG00000014069	ddx1	100	91.892	Haplochromis_burtoni
ENSFHEG00000008444	ddx1	100	82.568	ENSHGLG00000000801	DDX1	100	82.568	Heterocephalus_glaber_female
ENSFHEG00000008444	ddx1	100	82.425	ENSHGLG00100000711	DDX1	100	82.425	Heterocephalus_glaber_male
ENSFHEG00000008444	ddx1	100	90.676	ENSHCOG00000011492	ddx1	96	90.676	Hippocampus_comes
ENSFHEG00000008444	ddx1	100	86.622	ENSIPUG00000003494	ddx1	100	86.622	Ictalurus_punctatus
ENSFHEG00000008444	ddx1	100	83.106	ENSSTOG00000003977	DDX1	100	83.106	Ictidomys_tridecemlineatus
ENSFHEG00000008444	ddx1	99	75.725	ENSJJAG00000013315	Ddx1	100	78.168	Jaculus_jaculus
ENSFHEG00000008444	ddx1	100	93.649	ENSKMAG00000011340	ddx1	100	93.649	Kryptolebias_marmoratus
ENSFHEG00000008444	ddx1	100	84.091	ENSLBEG00000008692	ddx1	99	87.328	Labrus_bergylta
ENSFHEG00000008444	ddx1	100	83.649	ENSLACG00000010529	DDX1	100	83.649	Latimeria_chalumnae
ENSFHEG00000008444	ddx1	100	85.442	ENSLOCG00000016473	ddx1	100	84.987	Lepisosteus_oculatus
ENSFHEG00000008444	ddx1	100	83.651	ENSLAFG00000002213	DDX1	99	83.718	Loxodonta_africana
ENSFHEG00000008444	ddx1	100	83.514	ENSMFAG00000033987	DDX1	100	83.514	Macaca_fascicularis
ENSFHEG00000008444	ddx1	100	83.514	ENSMMUG00000023437	DDX1	100	83.514	Macaca_mulatta
ENSFHEG00000008444	ddx1	100	83.514	ENSMNEG00000029189	DDX1	100	83.514	Macaca_nemestrina
ENSFHEG00000008444	ddx1	100	83.514	ENSMLEG00000030787	DDX1	100	83.514	Mandrillus_leucophaeus
ENSFHEG00000008444	ddx1	100	92.568	ENSMAMG00000015916	ddx1	100	92.568	Mastacembelus_armatus
ENSFHEG00000008444	ddx1	100	92.098	ENSMZEG00005015207	ddx1	99	91.145	Maylandia_zebra
ENSFHEG00000008444	ddx1	100	80.759	ENSMGAG00000014025	DDX1	100	80.759	Meleagris_gallopavo
ENSFHEG00000008444	ddx1	64	96.364	ENSMAUG00000016156	Ddx1	100	96.364	Mesocricetus_auratus
ENSFHEG00000008444	ddx1	100	82.973	ENSMICG00000001023	DDX1	100	82.973	Microcebus_murinus
ENSFHEG00000008444	ddx1	100	82.703	ENSMOCG00000000257	Ddx1	100	82.703	Microtus_ochrogaster
ENSFHEG00000008444	ddx1	99	86.870	ENSMMOG00000015397	ddx1	99	89.466	Mola_mola
ENSFHEG00000008444	ddx1	100	84.469	ENSMODG00000010275	DDX1	99	84.469	Monodelphis_domestica
ENSFHEG00000008444	ddx1	100	92.568	ENSMALG00000016409	ddx1	100	92.568	Monopterus_albus
ENSFHEG00000008444	ddx1	100	82.838	MGP_CAROLIEiJ_G0017622	Ddx1	100	82.838	Mus_caroli
ENSFHEG00000008444	ddx1	100	82.703	ENSMUSG00000037149	Ddx1	100	82.703	Mus_musculus
ENSFHEG00000008444	ddx1	100	82.838	MGP_PahariEiJ_G0029378	Ddx1	100	82.838	Mus_pahari
ENSFHEG00000008444	ddx1	100	82.703	MGP_SPRETEiJ_G0018464	Ddx1	100	82.703	Mus_spretus
ENSFHEG00000008444	ddx1	100	82.973	ENSMPUG00000013606	DDX1	100	82.973	Mustela_putorius_furo
ENSFHEG00000008444	ddx1	100	82.561	ENSMLUG00000003027	DDX1	98	82.609	Myotis_lucifugus
ENSFHEG00000008444	ddx1	100	83.106	ENSNGAG00000015783	Ddx1	100	83.106	Nannospalax_galili
ENSFHEG00000008444	ddx1	88	86.106	ENSNBRG00000020677	ddx1	94	88.601	Neolamprologus_brichardi
ENSFHEG00000008444	ddx1	100	83.514	ENSNLEG00000014417	DDX1	100	83.514	Nomascus_leucogenys
ENSFHEG00000008444	ddx1	99	82.353	ENSMEUG00000008254	DDX1	99	82.353	Notamacropus_eugenii
ENSFHEG00000008444	ddx1	99	61.256	ENSOPRG00000004290	DDX1	100	60.135	Ochotona_princeps
ENSFHEG00000008444	ddx1	100	83.378	ENSODEG00000000569	DDX1	100	83.378	Octodon_degus
ENSFHEG00000008444	ddx1	100	92.925	ENSONIG00000000513	ddx1	100	92.848	Oreochromis_niloticus
ENSFHEG00000008444	ddx1	84	79.211	ENSOANG00000005450	DDX1	99	81.900	Ornithorhynchus_anatinus
ENSFHEG00000008444	ddx1	100	83.243	ENSOCUG00000007010	DDX1	100	83.243	Oryctolagus_cuniculus
ENSFHEG00000008444	ddx1	100	92.297	ENSORLG00000016709	ddx1	100	92.297	Oryzias_latipes
ENSFHEG00000008444	ddx1	100	92.098	ENSORLG00020003290	ddx1	100	92.098	Oryzias_latipes_hni
ENSFHEG00000008444	ddx1	100	91.892	ENSORLG00015022438	ddx1	100	91.892	Oryzias_latipes_hsok
ENSFHEG00000008444	ddx1	100	87.330	ENSOMEG00000017620	ddx1	100	87.297	Oryzias_melastigma
ENSFHEG00000008444	ddx1	100	83.016	ENSOGAG00000008730	DDX1	100	83.016	Otolemur_garnettii
ENSFHEG00000008444	ddx1	100	83.424	ENSOARG00000016369	DDX1	100	83.424	Ovis_aries
ENSFHEG00000008444	ddx1	100	83.243	ENSPPAG00000027432	DDX1	100	83.243	Pan_paniscus
ENSFHEG00000008444	ddx1	100	83.243	ENSPPRG00000020556	DDX1	100	83.243	Panthera_pardus
ENSFHEG00000008444	ddx1	100	83.378	ENSPTIG00000008267	DDX1	100	83.378	Panthera_tigris_altaica
ENSFHEG00000008444	ddx1	100	83.243	ENSPTRG00000011670	DDX1	100	83.243	Pan_troglodytes
ENSFHEG00000008444	ddx1	100	83.514	ENSPANG00000025185	DDX1	100	83.514	Papio_anubis
ENSFHEG00000008444	ddx1	100	84.605	ENSPKIG00000012466	ddx1	100	84.605	Paramormyrops_kingsleyae
ENSFHEG00000008444	ddx1	54	81.390	ENSPSIG00000012292	DDX1	100	81.390	Pelodiscus_sinensis
ENSFHEG00000008444	ddx1	100	90.599	ENSPMGG00000000782	ddx1	100	90.541	Periophthalmus_magnuspinnatus
ENSFHEG00000008444	ddx1	100	83.243	ENSPEMG00000016389	Ddx1	100	83.243	Peromyscus_maniculatus_bairdii
ENSFHEG00000008444	ddx1	100	77.174	ENSPMAG00000009118	-	100	77.174	Petromyzon_marinus
ENSFHEG00000008444	ddx1	100	85.000	ENSPCIG00000010941	DDX1	100	85.000	Phascolarctos_cinereus
ENSFHEG00000008444	ddx1	100	94.730	ENSPFOG00000011921	ddx1	100	94.730	Poecilia_formosa
ENSFHEG00000008444	ddx1	97	91.135	ENSPFOG00000006873	-	100	93.624	Poecilia_formosa
ENSFHEG00000008444	ddx1	100	94.595	ENSPLAG00000005939	ddx1	100	94.595	Poecilia_latipinna
ENSFHEG00000008444	ddx1	100	94.730	ENSPMEG00000011140	ddx1	100	94.730	Poecilia_mexicana
ENSFHEG00000008444	ddx1	100	94.595	ENSPREG00000011751	ddx1	100	94.595	Poecilia_reticulata
ENSFHEG00000008444	ddx1	100	83.378	ENSPPYG00000012638	DDX1	100	83.378	Pongo_abelii
ENSFHEG00000008444	ddx1	100	71.351	ENSPCAG00000001491	DDX1	100	71.351	Procavia_capensis
ENSFHEG00000008444	ddx1	100	80.926	ENSPCOG00000028185	DDX1	99	80.926	Propithecus_coquereli
ENSFHEG00000008444	ddx1	100	83.108	ENSPVAG00000013618	DDX1	100	83.108	Pteropus_vampyrus
ENSFHEG00000008444	ddx1	100	91.962	ENSPNYG00000013839	ddx1	100	91.892	Pundamilia_nyererei
ENSFHEG00000008444	ddx1	99	85.823	ENSPNAG00000017033	ddx1	97	88.550	Pygocentrus_nattereri
ENSFHEG00000008444	ddx1	100	82.973	ENSRNOG00000006652	Ddx1	100	82.973	Rattus_norvegicus
ENSFHEG00000008444	ddx1	100	82.568	ENSRBIG00000041664	DDX1	100	83.200	Rhinopithecus_bieti
ENSFHEG00000008444	ddx1	100	83.243	ENSRROG00000031167	DDX1	100	83.243	Rhinopithecus_roxellana
ENSFHEG00000008444	ddx1	100	83.514	ENSSBOG00000027577	DDX1	100	83.514	Saimiri_boliviensis_boliviensis
ENSFHEG00000008444	ddx1	100	76.839	ENSSHAG00000009363	DDX1	99	76.839	Sarcophilus_harrisii
ENSFHEG00000008444	ddx1	100	85.559	ENSSFOG00015014476	ddx1	100	85.541	Scleropages_formosus
ENSFHEG00000008444	ddx1	100	91.757	ENSSMAG00000010094	ddx1	100	91.757	Scophthalmus_maximus
ENSFHEG00000008444	ddx1	100	91.689	ENSSDUG00000012334	ddx1	100	91.622	Seriola_dumerili
ENSFHEG00000008444	ddx1	100	91.417	ENSSLDG00000025345	ddx1	100	91.351	Seriola_lalandi_dorsalis
ENSFHEG00000008444	ddx1	100	75.204	ENSSARG00000004536	DDX1	92	84.158	Sorex_araneus
ENSFHEG00000008444	ddx1	100	82.703	ENSSPUG00000018835	DDX1	100	82.703	Sphenodon_punctatus
ENSFHEG00000008444	ddx1	100	87.838	ENSSPAG00000023554	ddx1	100	87.838	Stegastes_partitus
ENSFHEG00000008444	ddx1	100	82.973	ENSSSCG00000008619	DDX1	100	82.973	Sus_scrofa
ENSFHEG00000008444	ddx1	100	84.332	ENSTGUG00000013096	DDX1	100	83.919	Taeniopygia_guttata
ENSFHEG00000008444	ddx1	100	90.736	ENSTRUG00000015765	ddx1	99	90.786	Takifugu_rubripes
ENSFHEG00000008444	ddx1	100	91.622	ENSTNIG00000016309	ddx1	100	91.622	Tetraodon_nigroviridis
ENSFHEG00000008444	ddx1	100	79.700	ENSTBEG00000008454	DDX1	100	79.700	Tupaia_belangeri
ENSFHEG00000008444	ddx1	100	83.243	ENSTTRG00000005081	DDX1	100	83.243	Tursiops_truncatus
ENSFHEG00000008444	ddx1	63	77.186	ENSUAMG00000017375	DDX1	87	77.186	Ursus_americanus
ENSFHEG00000008444	ddx1	100	82.834	ENSUMAG00000023450	DDX1	100	82.834	Ursus_maritimus
ENSFHEG00000008444	ddx1	85	86.698	ENSVPAG00000007764	DDX1	85	86.698	Vicugna_pacos
ENSFHEG00000008444	ddx1	100	83.106	ENSVVUG00000013085	DDX1	96	83.129	Vulpes_vulpes
ENSFHEG00000008444	ddx1	100	83.784	ENSXETG00000017825	ddx1	100	83.784	Xenopus_tropicalis
ENSFHEG00000008444	ddx1	100	91.700	ENSXCOG00000007082	ddx1	100	91.700	Xiphophorus_couchianus
ENSFHEG00000008444	ddx1	100	94.595	ENSXMAG00000004555	ddx1	100	94.595	Xiphophorus_maculatus