EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000009154 (Gene tree)
Gene ID: 105920062
Gene Symbol: exosc1
Alias: -
Full Name: exosome component 1
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 9425 bases
Position: chrKN806017.1:73140-82564
Accession: 105920062
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000026364	EXOSC1	PF10447.9	1.2e-14	1	1
ENSFHEP00000026364	ECR1_N	PF14382.6	2.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000002894	-	886	XM_012855562	ENSFHEP00000026364	194 (aa)	XP_012711016	UPI000644C043

Gene Model

Click here to download ENSFHEG00000009154's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000009154's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000009154	exosc1	98	76.440	ENSG00000171311	EXOSC1	98	76.440	Homo_sapiens
ENSFHEG00000009154	exosc1	100	89.691	ENSAPOG00000007822	exosc1	100	89.691	Acanthochromis_polyacanthus
ENSFHEG00000009154	exosc1	98	76.963	ENSAMEG00000000129	EXOSC1	98	76.963	Ailuropoda_melanoleuca
ENSFHEG00000009154	exosc1	95	88.649	ENSACIG00000018956	exosc1	91	88.649	Amphilophus_citrinellus
ENSFHEG00000009154	exosc1	100	88.660	ENSAOCG00000010699	exosc1	100	88.660	Amphiprion_ocellaris
ENSFHEG00000009154	exosc1	93	78.889	ENSAPEG00000012690	exosc1	97	78.889	Amphiprion_percula
ENSFHEG00000009154	exosc1	100	88.660	ENSATEG00000018683	exosc1	100	88.660	Anabas_testudineus
ENSFHEG00000009154	exosc1	99	71.503	ENSACAG00000002101	EXOSC1	99	71.503	Anolis_carolinensis
ENSFHEG00000009154	exosc1	98	76.440	ENSANAG00000034669	EXOSC1	98	76.440	Aotus_nancymaae
ENSFHEG00000009154	exosc1	100	88.660	ENSACLG00000021243	exosc1	100	88.660	Astatotilapia_calliptera
ENSFHEG00000009154	exosc1	100	86.082	ENSAMXG00000011116	exosc1	100	86.082	Astyanax_mexicanus
ENSFHEG00000009154	exosc1	98	76.963	ENSBTAG00000012699	EXOSC1	98	76.963	Bos_taurus
ENSFHEG00000009154	exosc1	94	34.031	WBGene00012966	exos-1	92	34.031	Caenorhabditis_elegans
ENSFHEG00000009154	exosc1	98	75.916	ENSCJAG00000016586	EXOSC1	98	75.916	Callithrix_jacchus
ENSFHEG00000009154	exosc1	98	76.440	ENSCAFG00000009068	EXOSC1	92	76.440	Canis_familiaris
ENSFHEG00000009154	exosc1	98	76.440	ENSCAFG00020006002	EXOSC1	92	76.440	Canis_lupus_dingo
ENSFHEG00000009154	exosc1	98	76.963	ENSCHIG00000015253	EXOSC1	98	76.963	Capra_hircus
ENSFHEG00000009154	exosc1	98	75.916	ENSTSYG00000000760	EXOSC1	98	75.916	Carlito_syrichta
ENSFHEG00000009154	exosc1	99	76.042	ENSCPOG00000001173	EXOSC1	98	76.042	Cavia_porcellus
ENSFHEG00000009154	exosc1	99	38.660	ENSCCAG00000023986	EXOSC1	98	38.660	Cebus_capucinus
ENSFHEG00000009154	exosc1	98	76.440	ENSCATG00000034114	EXOSC1	98	76.440	Cercocebus_atys
ENSFHEG00000009154	exosc1	98	76.440	ENSCLAG00000002463	EXOSC1	98	76.440	Chinchilla_lanigera
ENSFHEG00000009154	exosc1	98	75.916	ENSCSAG00000005870	EXOSC1	98	75.916	Chlorocebus_sabaeus
ENSFHEG00000009154	exosc1	95	64.130	ENSCHOG00000006477	EXOSC1	98	64.130	Choloepus_hoffmanni
ENSFHEG00000009154	exosc1	55	66.355	ENSCPBG00000011949	EXOSC1	88	66.355	Chrysemys_picta_bellii
ENSFHEG00000009154	exosc1	99	50.259	ENSCING00000022734	-	92	50.259	Ciona_intestinalis
ENSFHEG00000009154	exosc1	99	55.440	ENSCSAVG00000010865	-	98	55.440	Ciona_savignyi
ENSFHEG00000009154	exosc1	98	76.440	ENSCANG00000034159	EXOSC1	98	76.440	Colobus_angolensis_palliatus
ENSFHEG00000009154	exosc1	98	75.393	ENSCGRG00001000335	Exosc1	98	75.393	Cricetulus_griseus_chok1gshd
ENSFHEG00000009154	exosc1	98	75.393	ENSCGRG00000011602	Exosc1	98	75.393	Cricetulus_griseus_crigri
ENSFHEG00000009154	exosc1	100	74.742	ENSCSEG00000007895	exosc1	97	74.742	Cynoglossus_semilaevis
ENSFHEG00000009154	exosc1	100	95.361	ENSCVAG00000016748	exosc1	100	95.361	Cyprinodon_variegatus
ENSFHEG00000009154	exosc1	100	86.082	ENSDARG00000059841	exosc1	100	86.082	Danio_rerio
ENSFHEG00000009154	exosc1	74	74.483	ENSDNOG00000007983	EXOSC1	98	74.483	Dasypus_novemcinctus
ENSFHEG00000009154	exosc1	98	76.963	ENSDORG00000016528	Exosc1	98	76.963	Dipodomys_ordii
ENSFHEG00000009154	exosc1	95	50.000	FBgn0032346	Csl4	92	50.000	Drosophila_melanogaster
ENSFHEG00000009154	exosc1	98	74.869	ENSETEG00000002469	-	98	74.869	Echinops_telfairi
ENSFHEG00000009154	exosc1	97	62.500	ENSEBUG00000008164	exosc1	96	62.500	Eptatretus_burgeri
ENSFHEG00000009154	exosc1	98	67.539	ENSEASG00005008684	EXOSC1	98	67.539	Equus_asinus_asinus
ENSFHEG00000009154	exosc1	60	54.310	ENSECAG00000010621	EXOSC1	69	54.310	Equus_caballus
ENSFHEG00000009154	exosc1	98	75.916	ENSEEUG00000005647	EXOSC1	98	75.916	Erinaceus_europaeus
ENSFHEG00000009154	exosc1	99	84.264	ENSELUG00000017369	exosc1	87	84.264	Esox_lucius
ENSFHEG00000009154	exosc1	98	76.963	ENSFCAG00000040563	EXOSC1	92	76.963	Felis_catus
ENSFHEG00000009154	exosc1	98	74.346	ENSFALG00000008450	EXOSC1	98	74.346	Ficedula_albicollis
ENSFHEG00000009154	exosc1	98	76.963	ENSFDAG00000000846	EXOSC1	98	76.963	Fukomys_damarensis
ENSFHEG00000009154	exosc1	100	86.082	ENSGMOG00000008993	exosc1	100	86.082	Gadus_morhua
ENSFHEG00000009154	exosc1	98	63.351	ENSGALG00000039917	EXOSC1	99	80.000	Gallus_gallus
ENSFHEG00000009154	exosc1	100	95.876	ENSGAFG00000010265	exosc1	95	95.876	Gambusia_affinis
ENSFHEG00000009154	exosc1	100	86.082	ENSGACG00000018936	exosc1	100	86.082	Gasterosteus_aculeatus
ENSFHEG00000009154	exosc1	98	73.822	ENSGAGG00000019192	EXOSC1	98	73.822	Gopherus_agassizii
ENSFHEG00000009154	exosc1	98	65.445	ENSGGOG00000003099	EXOSC1	98	65.445	Gorilla_gorilla
ENSFHEG00000009154	exosc1	100	88.660	ENSHBUG00000017857	exosc1	100	88.660	Haplochromis_burtoni
ENSFHEG00000009154	exosc1	98	76.440	ENSHGLG00000016927	EXOSC1	98	76.440	Heterocephalus_glaber_female
ENSFHEG00000009154	exosc1	98	76.440	ENSHGLG00100012208	EXOSC1	98	76.440	Heterocephalus_glaber_male
ENSFHEG00000009154	exosc1	100	87.113	ENSHCOG00000019882	exosc1	100	87.113	Hippocampus_comes
ENSFHEG00000009154	exosc1	100	84.536	ENSIPUG00000007685	exosc1	100	84.536	Ictalurus_punctatus
ENSFHEG00000009154	exosc1	99	75.521	ENSSTOG00000006615	EXOSC1	98	75.521	Ictidomys_tridecemlineatus
ENSFHEG00000009154	exosc1	61	63.025	ENSSTOG00000029860	-	91	63.025	Ictidomys_tridecemlineatus
ENSFHEG00000009154	exosc1	98	76.440	ENSJJAG00000013311	Exosc1	98	76.440	Jaculus_jaculus
ENSFHEG00000009154	exosc1	100	88.144	ENSKMAG00000001202	exosc1	82	88.144	Kryptolebias_marmoratus
ENSFHEG00000009154	exosc1	100	88.660	ENSLBEG00000011448	exosc1	100	88.660	Labrus_bergylta
ENSFHEG00000009154	exosc1	100	62.000	ENSLOCG00000003776	exosc1	100	62.000	Lepisosteus_oculatus
ENSFHEG00000009154	exosc1	98	76.440	ENSLAFG00000015983	EXOSC1	98	76.440	Loxodonta_africana
ENSFHEG00000009154	exosc1	98	76.440	ENSMFAG00000001493	EXOSC1	98	76.440	Macaca_fascicularis
ENSFHEG00000009154	exosc1	98	76.440	ENSMMUG00000020028	EXOSC1	98	70.408	Macaca_mulatta
ENSFHEG00000009154	exosc1	98	76.440	ENSMNEG00000029816	EXOSC1	98	76.440	Macaca_nemestrina
ENSFHEG00000009154	exosc1	98	71.728	ENSMLEG00000027643	EXOSC1	98	71.728	Mandrillus_leucophaeus
ENSFHEG00000009154	exosc1	100	90.206	ENSMAMG00000012200	exosc1	100	90.206	Mastacembelus_armatus
ENSFHEG00000009154	exosc1	100	88.660	ENSMZEG00005007042	exosc1	100	88.660	Maylandia_zebra
ENSFHEG00000009154	exosc1	98	65.445	ENSMAUG00000020462	-	98	65.445	Mesocricetus_auratus
ENSFHEG00000009154	exosc1	99	76.042	ENSMICG00000007664	EXOSC1	91	76.042	Microcebus_murinus
ENSFHEG00000009154	exosc1	98	75.393	ENSMOCG00000006004	-	98	75.393	Microtus_ochrogaster
ENSFHEG00000009154	exosc1	97	70.899	ENSMOCG00000017124	-	96	70.899	Microtus_ochrogaster
ENSFHEG00000009154	exosc1	100	67.526	ENSMMOG00000021403	exosc1	100	67.526	Mola_mola
ENSFHEG00000009154	exosc1	99	75.648	ENSMODG00000004213	EXOSC1	98	75.648	Monodelphis_domestica
ENSFHEG00000009154	exosc1	95	90.270	ENSMALG00000007061	exosc1	93	90.270	Monopterus_albus
ENSFHEG00000009154	exosc1	98	74.869	MGP_CAROLIEiJ_G0022959	Exosc1	98	74.869	Mus_caroli
ENSFHEG00000009154	exosc1	98	74.869	ENSMUSG00000034321	Exosc1	98	74.869	Mus_musculus
ENSFHEG00000009154	exosc1	98	75.393	MGP_PahariEiJ_G0014449	Exosc1	98	75.393	Mus_pahari
ENSFHEG00000009154	exosc1	98	74.869	MGP_SPRETEiJ_G0023880	Exosc1	98	74.869	Mus_spretus
ENSFHEG00000009154	exosc1	98	76.963	ENSMPUG00000017044	EXOSC1	98	76.963	Mustela_putorius_furo
ENSFHEG00000009154	exosc1	98	76.440	ENSMLUG00000009228	EXOSC1	98	76.440	Myotis_lucifugus
ENSFHEG00000009154	exosc1	98	73.822	ENSNGAG00000022033	Exosc1	98	73.822	Nannospalax_galili
ENSFHEG00000009154	exosc1	100	69.588	ENSNBRG00000024007	exosc1	99	69.588	Neolamprologus_brichardi
ENSFHEG00000009154	exosc1	98	75.916	ENSNLEG00000013872	EXOSC1	98	75.916	Nomascus_leucogenys
ENSFHEG00000009154	exosc1	58	70.536	ENSMEUG00000002246	EXOSC1	97	70.536	Notamacropus_eugenii
ENSFHEG00000009154	exosc1	98	75.393	ENSOPRG00000005065	EXOSC1	98	75.393	Ochotona_princeps
ENSFHEG00000009154	exosc1	98	76.963	ENSODEG00000016709	EXOSC1	98	76.963	Octodon_degus
ENSFHEG00000009154	exosc1	100	88.144	ENSONIG00000017683	exosc1	99	88.144	Oreochromis_niloticus
ENSFHEG00000009154	exosc1	59	85.965	ENSOANG00000006563	EXOSC1	98	82.927	Ornithorhynchus_anatinus
ENSFHEG00000009154	exosc1	98	75.000	ENSOCUG00000011898	-	98	75.000	Oryctolagus_cuniculus
ENSFHEG00000009154	exosc1	99	70.312	ENSOCUG00000026461	-	98	70.312	Oryctolagus_cuniculus
ENSFHEG00000009154	exosc1	100	86.667	ENSORLG00000011595	exosc1	100	86.667	Oryzias_latipes
ENSFHEG00000009154	exosc1	100	86.667	ENSORLG00020005831	exosc1	100	86.667	Oryzias_latipes_hni
ENSFHEG00000009154	exosc1	100	86.667	ENSORLG00015004317	exosc1	100	86.667	Oryzias_latipes_hsok
ENSFHEG00000009154	exosc1	100	73.711	ENSOMEG00000013907	exosc1	99	73.711	Oryzias_melastigma
ENSFHEG00000009154	exosc1	98	75.916	ENSOGAG00000016259	EXOSC1	98	75.916	Otolemur_garnettii
ENSFHEG00000009154	exosc1	98	76.440	ENSOARG00000010136	EXOSC1	98	76.440	Ovis_aries
ENSFHEG00000009154	exosc1	98	71.503	ENSPPAG00000039842	EXOSC1	98	71.503	Pan_paniscus
ENSFHEG00000009154	exosc1	98	76.963	ENSPPRG00000023366	EXOSC1	98	76.963	Panthera_pardus
ENSFHEG00000009154	exosc1	98	76.963	ENSPTIG00000017701	EXOSC1	98	76.963	Panthera_tigris_altaica
ENSFHEG00000009154	exosc1	98	76.440	ENSPTRG00000002808	EXOSC1	98	76.440	Pan_troglodytes
ENSFHEG00000009154	exosc1	98	76.440	ENSPANG00000021324	EXOSC1	98	76.440	Papio_anubis
ENSFHEG00000009154	exosc1	100	85.567	ENSPKIG00000016037	exosc1	100	85.567	Paramormyrops_kingsleyae
ENSFHEG00000009154	exosc1	91	64.706	ENSPSIG00000013571	EXOSC1	98	74.380	Pelodiscus_sinensis
ENSFHEG00000009154	exosc1	100	76.804	ENSPMGG00000014002	exosc1	100	76.804	Periophthalmus_magnuspinnatus
ENSFHEG00000009154	exosc1	98	75.393	ENSPEMG00000010710	-	98	75.393	Peromyscus_maniculatus_bairdii
ENSFHEG00000009154	exosc1	96	65.775	ENSPMAG00000000195	exosc1	95	65.775	Petromyzon_marinus
ENSFHEG00000009154	exosc1	99	75.521	ENSPCIG00000002210	EXOSC1	97	75.521	Phascolarctos_cinereus
ENSFHEG00000009154	exosc1	100	95.361	ENSPFOG00000006755	exosc1	95	95.361	Poecilia_formosa
ENSFHEG00000009154	exosc1	100	95.361	ENSPLAG00000005880	exosc1	100	95.361	Poecilia_latipinna
ENSFHEG00000009154	exosc1	100	95.361	ENSPMEG00000015598	exosc1	95	95.361	Poecilia_mexicana
ENSFHEG00000009154	exosc1	100	82.990	ENSPREG00000000405	exosc1	94	82.990	Poecilia_reticulata
ENSFHEG00000009154	exosc1	98	76.440	ENSPPYG00000002531	EXOSC1	98	76.440	Pongo_abelii
ENSFHEG00000009154	exosc1	98	75.393	ENSPCAG00000009135	EXOSC1	98	75.393	Procavia_capensis
ENSFHEG00000009154	exosc1	98	71.204	ENSPCOG00000027539	EXOSC1	98	71.204	Propithecus_coquereli
ENSFHEG00000009154	exosc1	98	76.440	ENSPVAG00000003372	EXOSC1	98	76.440	Pteropus_vampyrus
ENSFHEG00000009154	exosc1	100	88.660	ENSPNYG00000021745	exosc1	100	88.660	Pundamilia_nyererei
ENSFHEG00000009154	exosc1	100	85.052	ENSPNAG00000001944	exosc1	100	85.052	Pygocentrus_nattereri
ENSFHEG00000009154	exosc1	98	75.393	ENSRNOG00000048708	Exosc1	98	75.393	Rattus_norvegicus
ENSFHEG00000009154	exosc1	98	76.440	ENSRBIG00000035618	EXOSC1	98	76.440	Rhinopithecus_bieti
ENSFHEG00000009154	exosc1	98	76.440	ENSRROG00000032589	EXOSC1	91	76.440	Rhinopithecus_roxellana
ENSFHEG00000009154	exosc1	65	36.810	YNL232W	CSL4	55	36.810	Saccharomyces_cerevisiae
ENSFHEG00000009154	exosc1	98	76.440	ENSSBOG00000000359	EXOSC1	98	76.440	Saimiri_boliviensis_boliviensis
ENSFHEG00000009154	exosc1	75	83.673	ENSSHAG00000018219	EXOSC1	100	83.673	Sarcophilus_harrisii
ENSFHEG00000009154	exosc1	100	84.536	ENSSFOG00015009069	exosc1	100	84.536	Scleropages_formosus
ENSFHEG00000009154	exosc1	100	81.959	ENSSFOG00015016289	-	100	81.959	Scleropages_formosus
ENSFHEG00000009154	exosc1	100	88.144	ENSSMAG00000003721	exosc1	100	88.144	Scophthalmus_maximus
ENSFHEG00000009154	exosc1	100	87.113	ENSSDUG00000002993	exosc1	100	87.113	Seriola_dumerili
ENSFHEG00000009154	exosc1	100	87.113	ENSSLDG00000025181	exosc1	100	87.113	Seriola_lalandi_dorsalis
ENSFHEG00000009154	exosc1	98	64.398	ENSSARG00000000162	EXOSC1	98	64.398	Sorex_araneus
ENSFHEG00000009154	exosc1	98	70.681	ENSSPUG00000012263	EXOSC1	98	70.681	Sphenodon_punctatus
ENSFHEG00000009154	exosc1	100	80.928	ENSSPAG00000016792	exosc1	83	80.928	Stegastes_partitus
ENSFHEG00000009154	exosc1	98	76.440	ENSSSCG00000010518	EXOSC1	89	76.440	Sus_scrofa
ENSFHEG00000009154	exosc1	98	73.298	ENSTGUG00000009692	EXOSC1	98	73.298	Taeniopygia_guttata
ENSFHEG00000009154	exosc1	98	80.000	ENSTRUG00000007706	exosc1	98	80.000	Takifugu_rubripes
ENSFHEG00000009154	exosc1	98	78.756	ENSTNIG00000014079	exosc1	97	78.756	Tetraodon_nigroviridis
ENSFHEG00000009154	exosc1	98	70.681	ENSTBEG00000006011	EXOSC1	98	70.681	Tupaia_belangeri
ENSFHEG00000009154	exosc1	94	77.596	ENSTTRG00000009887	EXOSC1	99	77.596	Tursiops_truncatus
ENSFHEG00000009154	exosc1	98	60.714	ENSUAMG00000010266	EXOSC1	98	60.714	Ursus_americanus
ENSFHEG00000009154	exosc1	98	61.780	ENSUMAG00000022002	EXOSC1	98	61.780	Ursus_maritimus
ENSFHEG00000009154	exosc1	98	76.440	ENSVVUG00000023192	EXOSC1	62	76.440	Vulpes_vulpes
ENSFHEG00000009154	exosc1	99	72.539	ENSXETG00000003434	exosc1	99	72.539	Xenopus_tropicalis
ENSFHEG00000009154	exosc1	62	100.000	ENSXCOG00000014499	exosc1	93	100.000	Xiphophorus_couchianus
ENSFHEG00000009154	exosc1	100	83.505	ENSXMAG00000023382	exosc1	94	83.505	Xiphophorus_maculatus