EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000009476 (Gene tree)
Gene ID: 105936365
Gene Symbol: srsf5b
Alias: sfrs5b|wu:fe15e05|zgc:113907|zgc:92278
Full Name: serine/arginine-rich splicing factor 5-like
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 5976 bases
Position: chrKN805608.1:352665-358640
Accession: 105936365
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000026558	RRM_1	PF00076.22	6e-32	1	2
ENSFHEP00000026558	RRM_1	PF00076.22	6e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000002392	-	2444	XM_012877163	ENSFHEP00000026558	307 (aa)	XP_012732617	UPI0006449D1B

Gene Model

Click here to download ENSFHEG00000009476's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000009476's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000009476	srsf5b	59	63.587	ENSFHEG00000007472	srsf4	97	60.194
ENSFHEG00000009476	srsf5b	55	48.023	ENSFHEG00000017425	-	86	49.711
ENSFHEG00000009476	srsf5b	55	46.243	ENSFHEG00000003174	srsf1a	68	43.094
ENSFHEG00000009476	srsf5b	57	42.778	ENSFHEG00000020851	srsf9	68	41.111
ENSFHEG00000009476	srsf5b	60	65.829	ENSFHEG00000003955	srsf5a	95	61.268

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000009476	srsf5b	60	84.324	ENSG00000100650	SRSF5	98	74.219	Homo_sapiens
ENSFHEG00000009476	srsf5b	88	93.358	ENSAPOG00000008642	srsf5b	100	89.577	Acanthochromis_polyacanthus
ENSFHEG00000009476	srsf5b	60	84.324	ENSAMEG00000014574	SRSF5	96	70.609	Ailuropoda_melanoleuca
ENSFHEG00000009476	srsf5b	88	91.912	ENSACIG00000010742	srsf5b	93	90.146	Amphilophus_citrinellus
ENSFHEG00000009476	srsf5b	88	92.989	ENSAOCG00000005719	srsf5b	92	93.040	Amphiprion_ocellaris
ENSFHEG00000009476	srsf5b	88	92.989	ENSAPEG00000007830	srsf5b	92	93.040	Amphiprion_percula
ENSFHEG00000009476	srsf5b	88	91.144	ENSATEG00000019112	srsf5b	92	90.809	Anabas_testudineus
ENSFHEG00000009476	srsf5b	58	82.584	ENSAPLG00000014681	SRSF5	96	66.182	Anas_platyrhynchos
ENSFHEG00000009476	srsf5b	60	85.405	ENSACAG00000005143	SRSF5	96	68.364	Anolis_carolinensis
ENSFHEG00000009476	srsf5b	60	84.324	ENSANAG00000027977	-	73	91.667	Aotus_nancymaae
ENSFHEG00000009476	srsf5b	88	92.251	ENSACLG00000026424	srsf5b	92	92.308	Astatotilapia_calliptera
ENSFHEG00000009476	srsf5b	62	94.180	ENSAMXG00000011932	srsf5b	84	94.531	Astyanax_mexicanus
ENSFHEG00000009476	srsf5b	60	84.324	ENSBTAG00000011596	SRSF5	96	70.609	Bos_taurus
ENSFHEG00000009476	srsf5b	60	84.324	ENSCJAG00000014884	SRSF5	96	71.119	Callithrix_jacchus
ENSFHEG00000009476	srsf5b	60	84.324	ENSCAFG00000016589	SRSF5	96	70.609	Canis_familiaris
ENSFHEG00000009476	srsf5b	60	84.324	ENSCAFG00020005661	SRSF5	96	70.609	Canis_lupus_dingo
ENSFHEG00000009476	srsf5b	60	82.162	ENSCHIG00000016794	SRSF5	66	83.069	Capra_hircus
ENSFHEG00000009476	srsf5b	60	84.324	ENSTSYG00000007786	SRSF5	96	72.202	Carlito_syrichta
ENSFHEG00000009476	srsf5b	60	84.324	ENSCAPG00000008801	SRSF5	66	83.069	Cavia_aperea
ENSFHEG00000009476	srsf5b	60	84.324	ENSCPOG00000039926	SRSF5	66	83.069	Cavia_porcellus
ENSFHEG00000009476	srsf5b	60	84.324	ENSCCAG00000029002	SRSF5	96	71.119	Cebus_capucinus
ENSFHEG00000009476	srsf5b	60	84.324	ENSCATG00000045051	SRSF5	96	71.119	Cercocebus_atys
ENSFHEG00000009476	srsf5b	60	84.324	ENSCLAG00000004755	SRSF5	86	64.103	Chinchilla_lanigera
ENSFHEG00000009476	srsf5b	60	84.324	ENSCSAG00000013041	SRSF5	96	71.119	Chlorocebus_sabaeus
ENSFHEG00000009476	srsf5b	60	82.703	ENSCPBG00000021653	SRSF5	96	68.364	Chrysemys_picta_bellii
ENSFHEG00000009476	srsf5b	60	84.324	ENSCANG00000030560	SRSF5	96	71.119	Colobus_angolensis_palliatus
ENSFHEG00000009476	srsf5b	60	84.324	ENSCGRG00000009833	Srsf5	96	70.758	Cricetulus_griseus_crigri
ENSFHEG00000009476	srsf5b	81	90.873	ENSCSEG00000003801	srsf5b	93	87.273	Cynoglossus_semilaevis
ENSFHEG00000009476	srsf5b	89	89.273	ENSCVAG00000017240	srsf5b	89	90.311	Cyprinodon_variegatus
ENSFHEG00000009476	srsf5b	60	94.054	ENSDARG00000027734	srsf5b	90	87.500	Danio_rerio
ENSFHEG00000009476	srsf5b	60	82.162	ENSDNOG00000006160	SRSF5	68	83.069	Dasypus_novemcinctus
ENSFHEG00000009476	srsf5b	60	79.348	ENSETEG00000020396	SRSF5	68	78.191	Echinops_telfairi
ENSFHEG00000009476	srsf5b	61	62.245	ENSEBUG00000006229	srsf5b	69	63.351	Eptatretus_burgeri
ENSFHEG00000009476	srsf5b	60	84.324	ENSEASG00005016615	SRSF5	96	70.609	Equus_asinus_asinus
ENSFHEG00000009476	srsf5b	75	70.259	ENSECAG00000026873	SRSF5	88	74.219	Equus_caballus
ENSFHEG00000009476	srsf5b	88	71.053	ENSELUG00000019852	srsf5b	85	80.556	Esox_lucius
ENSFHEG00000009476	srsf5b	60	84.324	ENSFCAG00000008848	SRSF5	96	70.609	Felis_catus
ENSFHEG00000009476	srsf5b	60	82.065	ENSFALG00000004979	SRSF5	68	80.319	Ficedula_albicollis
ENSFHEG00000009476	srsf5b	75	70.259	ENSFDAG00000011562	SRSF5	96	71.273	Fukomys_damarensis
ENSFHEG00000009476	srsf5b	61	79.646	ENSGMOG00000000595	srsf5b	99	79.646	Gadus_morhua
ENSFHEG00000009476	srsf5b	60	81.522	ENSGALG00000009421	SRSF5	88	75.781	Gallus_gallus
ENSFHEG00000009476	srsf5b	100	94.788	ENSGAFG00000002865	srsf5b	100	94.788	Gambusia_affinis
ENSFHEG00000009476	srsf5b	88	66.163	ENSGACG00000007834	srsf5b	86	83.824	Gasterosteus_aculeatus
ENSFHEG00000009476	srsf5b	60	82.703	ENSGAGG00000004447	SRSF5	96	68.364	Gopherus_agassizii
ENSFHEG00000009476	srsf5b	60	84.324	ENSGGOG00000016462	SRSF5	96	71.119	Gorilla_gorilla
ENSFHEG00000009476	srsf5b	88	91.882	ENSHBUG00000012462	srsf5b	93	99.219	Haplochromis_burtoni
ENSFHEG00000009476	srsf5b	60	83.784	ENSHGLG00000010147	SRSF5	96	70.758	Heterocephalus_glaber_female
ENSFHEG00000009476	srsf5b	76	48.649	ENSHGLG00100000095	-	62	59.444	Heterocephalus_glaber_male
ENSFHEG00000009476	srsf5b	60	83.784	ENSHGLG00100015328	SRSF5	96	70.758	Heterocephalus_glaber_male
ENSFHEG00000009476	srsf5b	61	88.542	ENSHCOG00000005592	srsf5b	66	87.500	Hippocampus_comes
ENSFHEG00000009476	srsf5b	60	84.324	ENSSTOG00000020672	SRSF5	96	71.119	Ictidomys_tridecemlineatus
ENSFHEG00000009476	srsf5b	60	84.324	ENSJJAG00000001688	Srsf5	96	70.609	Jaculus_jaculus
ENSFHEG00000009476	srsf5b	88	94.465	ENSKMAG00000020486	srsf5b	90	94.139	Kryptolebias_marmoratus
ENSFHEG00000009476	srsf5b	88	90.476	ENSLBEG00000013647	srsf5b	93	90.545	Labrus_bergylta
ENSFHEG00000009476	srsf5b	60	85.326	ENSLACG00000005874	SRSF5	68	84.043	Latimeria_chalumnae
ENSFHEG00000009476	srsf5b	60	86.772	ENSLOCG00000012438	srsf5b	70	82.383	Lepisosteus_oculatus
ENSFHEG00000009476	srsf5b	60	83.784	ENSLAFG00000005260	SRSF5	96	70.397	Loxodonta_africana
ENSFHEG00000009476	srsf5b	60	84.324	ENSMFAG00000002393	SRSF5	96	71.119	Macaca_fascicularis
ENSFHEG00000009476	srsf5b	60	84.324	ENSMNEG00000030872	SRSF5	96	71.119	Macaca_nemestrina
ENSFHEG00000009476	srsf5b	60	84.324	ENSMLEG00000030017	SRSF5	96	71.119	Mandrillus_leucophaeus
ENSFHEG00000009476	srsf5b	83	92.913	ENSMAMG00000002673	srsf5b	92	91.575	Mastacembelus_armatus
ENSFHEG00000009476	srsf5b	88	92.251	ENSMZEG00005003550	srsf5b	92	92.308	Maylandia_zebra
ENSFHEG00000009476	srsf5b	60	84.324	ENSMAUG00000009544	Srsf5	96	70.758	Mesocricetus_auratus
ENSFHEG00000009476	srsf5b	60	84.324	ENSMOCG00000013134	Srsf5	96	70.758	Microtus_ochrogaster
ENSFHEG00000009476	srsf5b	91	76.429	ENSMMOG00000000137	srsf5b	80	96.154	Mola_mola
ENSFHEG00000009476	srsf5b	60	82.703	ENSMODG00000011362	SRSF5	68	83.598	Monodelphis_domestica
ENSFHEG00000009476	srsf5b	88	90.809	ENSMALG00000021875	srsf5b	84	99.225	Monopterus_albus
ENSFHEG00000009476	srsf5b	60	84.324	ENSMUSG00000021134	Srsf5	96	90.909	Mus_musculus
ENSFHEG00000009476	srsf5b	60	84.324	MGP_PahariEiJ_G0029659	Srsf5	96	70.758	Mus_pahari
ENSFHEG00000009476	srsf5b	60	84.324	ENSMPUG00000007458	SRSF5	96	70.609	Mustela_putorius_furo
ENSFHEG00000009476	srsf5b	60	82.162	ENSMLUG00000011939	SRSF5	65	83.069	Myotis_lucifugus
ENSFHEG00000009476	srsf5b	60	84.324	ENSNGAG00000010073	-	96	70.758	Nannospalax_galili
ENSFHEG00000009476	srsf5b	88	87.546	ENSNBRG00000001285	srsf5b	92	89.091	Neolamprologus_brichardi
ENSFHEG00000009476	srsf5b	60	84.324	ENSNLEG00000001615	SRSF5	96	71.119	Nomascus_leucogenys
ENSFHEG00000009476	srsf5b	60	84.324	ENSOPRG00000008286	SRSF5	65	83.069	Ochotona_princeps
ENSFHEG00000009476	srsf5b	60	84.324	ENSODEG00000013469	-	68	83.069	Octodon_degus
ENSFHEG00000009476	srsf5b	60	80.541	ENSODEG00000000700	-	69	80.952	Octodon_degus
ENSFHEG00000009476	srsf5b	88	92.251	ENSONIG00000005759	srsf5b	92	92.308	Oreochromis_niloticus
ENSFHEG00000009476	srsf5b	60	78.378	ENSOANG00000013336	SRSF5	96	68.478	Ornithorhynchus_anatinus
ENSFHEG00000009476	srsf5b	60	84.324	ENSOCUG00000009274	SRSF5	66	83.069	Oryctolagus_cuniculus
ENSFHEG00000009476	srsf5b	88	76.768	ENSORLG00000029854	srsf5b	93	78.405	Oryzias_latipes
ENSFHEG00000009476	srsf5b	88	89.744	ENSORLG00015001720	srsf5b	100	86.084	Oryzias_latipes_hsok
ENSFHEG00000009476	srsf5b	89	89.130	ENSOMEG00000020690	srsf5b	67	88.000	Oryzias_melastigma
ENSFHEG00000009476	srsf5b	60	82.162	ENSOGAG00000015122	SRSF5	96	71.119	Otolemur_garnettii
ENSFHEG00000009476	srsf5b	60	84.324	ENSPPAG00000029921	SRSF5	96	71.119	Pan_paniscus
ENSFHEG00000009476	srsf5b	60	84.324	ENSPPRG00000012903	SRSF5	96	70.609	Panthera_pardus
ENSFHEG00000009476	srsf5b	60	84.324	ENSPTIG00000018589	SRSF5	96	70.609	Panthera_tigris_altaica
ENSFHEG00000009476	srsf5b	60	84.324	ENSPTRG00000006488	SRSF5	96	71.119	Pan_troglodytes
ENSFHEG00000009476	srsf5b	60	84.324	ENSPANG00000021091	SRSF5	96	71.119	Papio_anubis
ENSFHEG00000009476	srsf5b	63	81.347	ENSPSIG00000012522	SRSF5	96	68.727	Pelodiscus_sinensis
ENSFHEG00000009476	srsf5b	62	61.111	ENSPMAG00000007790	srsf5b	68	61.421	Petromyzon_marinus
ENSFHEG00000009476	srsf5b	60	82.703	ENSPCIG00000011877	SRSF5	68	83.598	Phascolarctos_cinereus
ENSFHEG00000009476	srsf5b	100	94.788	ENSPFOG00000017700	srsf5b	100	94.788	Poecilia_formosa
ENSFHEG00000009476	srsf5b	100	94.481	ENSPLAG00000006480	srsf5b	100	94.481	Poecilia_latipinna
ENSFHEG00000009476	srsf5b	100	94.788	ENSPMEG00000012751	srsf5b	100	94.788	Poecilia_mexicana
ENSFHEG00000009476	srsf5b	100	94.788	ENSPREG00000010381	srsf5b	100	94.788	Poecilia_reticulata
ENSFHEG00000009476	srsf5b	60	84.324	ENSPPYG00000005945	SRSF5	96	71.119	Pongo_abelii
ENSFHEG00000009476	srsf5b	50	79.739	ENSPCAG00000004405	SRSF5	100	77.632	Procavia_capensis
ENSFHEG00000009476	srsf5b	60	84.324	ENSPCOG00000014442	SRSF5	96	71.119	Propithecus_coquereli
ENSFHEG00000009476	srsf5b	88	83.026	ENSPNYG00000002669	srsf5b	94	99.219	Pundamilia_nyererei
ENSFHEG00000009476	srsf5b	62	93.651	ENSPNAG00000011262	srsf5b	95	79.853	Pygocentrus_nattereri
ENSFHEG00000009476	srsf5b	60	84.324	ENSRBIG00000013003	SRSF5	96	71.119	Rhinopithecus_bieti
ENSFHEG00000009476	srsf5b	60	84.324	ENSRROG00000043407	SRSF5	96	71.119	Rhinopithecus_roxellana
ENSFHEG00000009476	srsf5b	60	84.324	ENSSBOG00000030784	SRSF5	96	71.119	Saimiri_boliviensis_boliviensis
ENSFHEG00000009476	srsf5b	60	82.703	ENSSHAG00000002871	SRSF5	68	83.598	Sarcophilus_harrisii
ENSFHEG00000009476	srsf5b	89	79.672	ENSSMAG00000019728	srsf5b	92	79.530	Scophthalmus_maximus
ENSFHEG00000009476	srsf5b	86	92.395	ENSSDUG00000005766	srsf5b	92	92.395	Seriola_dumerili
ENSFHEG00000009476	srsf5b	88	92.251	ENSSLDG00000023255	srsf5b	92	92.308	Seriola_lalandi_dorsalis
ENSFHEG00000009476	srsf5b	60	70.652	ENSSARG00000001059	SRSF5	67	68.254	Sorex_araneus
ENSFHEG00000009476	srsf5b	60	78.756	ENSSPUG00000002464	SRSF5	89	71.533	Sphenodon_punctatus
ENSFHEG00000009476	srsf5b	88	92.620	ENSSPAG00000015325	srsf5b	92	92.674	Stegastes_partitus
ENSFHEG00000009476	srsf5b	60	84.324	ENSSSCG00000032583	SRSF5	96	70.251	Sus_scrofa
ENSFHEG00000009476	srsf5b	60	82.065	ENSTGUG00000011425	SRSF5	68	80.319	Taeniopygia_guttata
ENSFHEG00000009476	srsf5b	61	94.149	ENSTRUG00000017811	srsf5b	60	93.617	Takifugu_rubripes
ENSFHEG00000009476	srsf5b	89	82.721	ENSTNIG00000016411	srsf5b	95	81.618	Tetraodon_nigroviridis
ENSFHEG00000009476	srsf5b	62	80.729	ENSTBEG00000001972	SRSF5	80	68.722	Tupaia_belangeri
ENSFHEG00000009476	srsf5b	60	82.065	ENSTTRG00000003318	SRSF5	66	82.979	Tursiops_truncatus
ENSFHEG00000009476	srsf5b	60	84.324	ENSUAMG00000014184	SRSF5	96	70.609	Ursus_americanus
ENSFHEG00000009476	srsf5b	62	83.117	ENSUMAG00000009827	SRSF5	96	64.158	Ursus_maritimus
ENSFHEG00000009476	srsf5b	60	84.324	ENSVPAG00000006448	SRSF5	96	71.119	Vicugna_pacos
ENSFHEG00000009476	srsf5b	60	84.324	ENSVVUG00000003790	SRSF5	96	70.609	Vulpes_vulpes
ENSFHEG00000009476	srsf5b	61	82.979	ENSXETG00000002211	srsf5	84	63.869	Xenopus_tropicalis
ENSFHEG00000009476	srsf5b	88	85.294	ENSXCOG00000001570	srsf5b	89	89.416	Xiphophorus_couchianus
ENSFHEG00000009476	srsf5b	100	94.156	ENSXMAG00000026416	srsf5b	100	94.156	Xiphophorus_maculatus