EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000009595 (Gene tree)
Gene ID: 105936721
Gene Symbol: rtcb
Alias: zgc:76871
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 7077 bases
Position: chrKN811490.1:506642-513718
Accession: 105936721
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000008392	RtcB	PF01139.17	4.1e-146	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000002218	-	1887	XM_012877678	ENSFHEP00000008392	505 (aa)	XP_012733132	UPI00064499FF

Gene Model

Click here to download ENSFHEG00000009595's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000009595's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000009595	rtcb	100	94.455	ENSG00000100220	RTCB	100	94.455	Homo_sapiens
ENSFHEG00000009595	rtcb	100	97.030	ENSAPOG00000006040	rtcb	100	97.030	Acanthochromis_polyacanthus
ENSFHEG00000009595	rtcb	100	94.455	ENSAMEG00000016152	RTCB	100	94.455	Ailuropoda_melanoleuca
ENSFHEG00000009595	rtcb	100	92.673	ENSACIG00000009083	rtcb	100	92.673	Amphilophus_citrinellus
ENSFHEG00000009595	rtcb	100	97.426	ENSAOCG00000005662	rtcb	100	98.478	Amphiprion_ocellaris
ENSFHEG00000009595	rtcb	96	92.813	ENSAPEG00000024653	rtcb	100	92.813	Amphiprion_percula
ENSFHEG00000009595	rtcb	100	97.426	ENSAPEG00000024701	rtcb	100	97.426	Amphiprion_percula
ENSFHEG00000009595	rtcb	100	97.426	ENSATEG00000000618	rtcb	100	97.426	Anabas_testudineus
ENSFHEG00000009595	rtcb	100	91.137	ENSACAG00000014817	RTCB	100	91.137	Anolis_carolinensis
ENSFHEG00000009595	rtcb	72	97.222	ENSANAG00000023724	-	84	97.222	Aotus_nancymaae
ENSFHEG00000009595	rtcb	100	80.198	ENSANAG00000018191	-	91	80.198	Aotus_nancymaae
ENSFHEG00000009595	rtcb	100	95.842	ENSACLG00000008367	rtcb	100	96.304	Astatotilapia_calliptera
ENSFHEG00000009595	rtcb	100	95.248	ENSAMXG00000042320	rtcb	100	95.248	Astyanax_mexicanus
ENSFHEG00000009595	rtcb	100	94.653	ENSBTAG00000011070	RTCB	100	94.653	Bos_taurus
ENSFHEG00000009595	rtcb	100	74.851	WBGene00008877	rtcb-1	100	74.851	Caenorhabditis_elegans
ENSFHEG00000009595	rtcb	100	94.257	ENSCJAG00000006128	RTCB	100	94.257	Callithrix_jacchus
ENSFHEG00000009595	rtcb	100	90.297	ENSCAFG00000010789	-	100	90.297	Canis_familiaris
ENSFHEG00000009595	rtcb	100	94.455	ENSCAFG00000001785	RTCB	100	94.455	Canis_familiaris
ENSFHEG00000009595	rtcb	100	94.455	ENSCAFG00020004890	-	100	94.455	Canis_lupus_dingo
ENSFHEG00000009595	rtcb	87	90.227	ENSCAFG00020018953	-	99	90.227	Canis_lupus_dingo
ENSFHEG00000009595	rtcb	100	94.653	ENSCHIG00000027009	-	100	94.653	Capra_hircus
ENSFHEG00000009595	rtcb	100	94.257	ENSTSYG00000012320	RTCB	100	94.257	Carlito_syrichta
ENSFHEG00000009595	rtcb	94	94.340	ENSCAPG00000011647	RTCB	96	94.340	Cavia_aperea
ENSFHEG00000009595	rtcb	100	94.257	ENSCCAG00000000618	RTCB	100	94.257	Cebus_capucinus
ENSFHEG00000009595	rtcb	100	94.257	ENSCATG00000033424	RTCB	100	94.257	Cercocebus_atys
ENSFHEG00000009595	rtcb	100	94.257	ENSCLAG00000007997	RTCB	100	94.257	Chinchilla_lanigera
ENSFHEG00000009595	rtcb	100	94.059	ENSCSAG00000008351	RTCB	100	94.059	Chlorocebus_sabaeus
ENSFHEG00000009595	rtcb	100	80.990	ENSCHOG00000009123	RTCB	100	80.990	Choloepus_hoffmanni
ENSFHEG00000009595	rtcb	100	93.861	ENSCPBG00000023184	RTCB	100	93.861	Chrysemys_picta_bellii
ENSFHEG00000009595	rtcb	100	82.574	ENSCING00000003830	-	100	82.574	Ciona_intestinalis
ENSFHEG00000009595	rtcb	100	82.772	ENSCSAVG00000008124	-	99	82.772	Ciona_savignyi
ENSFHEG00000009595	rtcb	100	90.495	ENSCANG00000001891	RTCB	100	90.495	Colobus_angolensis_palliatus
ENSFHEG00000009595	rtcb	100	94.059	ENSCGRG00001011173	Rtcb	100	94.059	Cricetulus_griseus_chok1gshd
ENSFHEG00000009595	rtcb	93	94.904	ENSCGRG00000009587	-	96	94.904	Cricetulus_griseus_crigri
ENSFHEG00000009595	rtcb	100	96.634	ENSCSEG00000003986	rtcb	100	96.634	Cynoglossus_semilaevis
ENSFHEG00000009595	rtcb	82	96.394	ENSCVAG00000000569	rtcb	95	96.394	Cyprinodon_variegatus
ENSFHEG00000009595	rtcb	100	96.634	ENSDARG00000101047	rtcb	100	96.634	Danio_rerio
ENSFHEG00000009595	rtcb	80	90.418	ENSDNOG00000012425	RTCB	99	90.418	Dasypus_novemcinctus
ENSFHEG00000009595	rtcb	100	94.455	ENSDORG00000010855	Rtcb	100	94.455	Dipodomys_ordii
ENSFHEG00000009595	rtcb	99	84.891	FBgn0032781	RtcB	99	84.891	Drosophila_melanogaster
ENSFHEG00000009595	rtcb	100	88.317	ENSETEG00000001988	RTCB	100	88.317	Echinops_telfairi
ENSFHEG00000009595	rtcb	100	85.545	ENSEBUG00000014235	rtcb	100	85.545	Eptatretus_burgeri
ENSFHEG00000009595	rtcb	100	94.257	ENSEASG00005019059	RTCB	100	94.257	Equus_asinus_asinus
ENSFHEG00000009595	rtcb	100	94.257	ENSECAG00000023998	RTCB	100	94.257	Equus_caballus
ENSFHEG00000009595	rtcb	89	85.459	ENSEEUG00000006251	RTCB	100	85.459	Erinaceus_europaeus
ENSFHEG00000009595	rtcb	100	82.798	ENSELUG00000009275	rtcb	100	82.798	Esox_lucius
ENSFHEG00000009595	rtcb	100	94.455	ENSFCAG00000026480	RTCB	100	94.455	Felis_catus
ENSFHEG00000009595	rtcb	100	94.455	ENSFALG00000013334	RTCB	100	94.455	Ficedula_albicollis
ENSFHEG00000009595	rtcb	100	94.257	ENSFDAG00000018150	RTCB	100	94.257	Fukomys_damarensis
ENSFHEG00000009595	rtcb	100	93.465	ENSGMOG00000018882	rtcb	100	93.465	Gadus_morhua
ENSFHEG00000009595	rtcb	100	94.059	ENSGALG00000012611	RTCB	100	94.059	Gallus_gallus
ENSFHEG00000009595	rtcb	100	98.020	ENSGAFG00000004198	rtcb	100	98.020	Gambusia_affinis
ENSFHEG00000009595	rtcb	100	95.842	ENSGACG00000000586	rtcb	100	95.842	Gasterosteus_aculeatus
ENSFHEG00000009595	rtcb	93	93.404	ENSGAGG00000019133	RTCB	98	93.404	Gopherus_agassizii
ENSFHEG00000009595	rtcb	100	94.455	ENSGGOG00000011402	RTCB	100	94.455	Gorilla_gorilla
ENSFHEG00000009595	rtcb	100	95.842	ENSHBUG00000020571	rtcb	100	95.842	Haplochromis_burtoni
ENSFHEG00000009595	rtcb	93	67.161	ENSHGLG00000001066	-	99	67.161	Heterocephalus_glaber_female
ENSFHEG00000009595	rtcb	100	94.257	ENSHGLG00000004492	RTCB	100	94.257	Heterocephalus_glaber_female
ENSFHEG00000009595	rtcb	100	94.257	ENSHGLG00100008965	RTCB	100	94.257	Heterocephalus_glaber_male
ENSFHEG00000009595	rtcb	100	94.280	ENSHCOG00000006450	rtcb	100	94.280	Hippocampus_comes
ENSFHEG00000009595	rtcb	100	95.446	ENSIPUG00000015443	rtcb	100	95.446	Ictalurus_punctatus
ENSFHEG00000009595	rtcb	100	94.455	ENSSTOG00000003878	RTCB	100	94.455	Ictidomys_tridecemlineatus
ENSFHEG00000009595	rtcb	100	94.059	ENSJJAG00000010667	Rtcb	100	94.059	Jaculus_jaculus
ENSFHEG00000009595	rtcb	100	97.426	ENSKMAG00000013178	rtcb	100	97.426	Kryptolebias_marmoratus
ENSFHEG00000009595	rtcb	100	97.228	ENSLBEG00000010566	RTCB	100	97.228	Labrus_bergylta
ENSFHEG00000009595	rtcb	100	96.040	ENSLBEG00000000214	rtcb	100	96.040	Labrus_bergylta
ENSFHEG00000009595	rtcb	100	94.059	ENSLACG00000013033	RTCB	100	94.059	Latimeria_chalumnae
ENSFHEG00000009595	rtcb	100	95.248	ENSLOCG00000016515	rtcb	99	95.248	Lepisosteus_oculatus
ENSFHEG00000009595	rtcb	100	93.861	ENSLAFG00000002082	RTCB	100	93.861	Loxodonta_africana
ENSFHEG00000009595	rtcb	100	94.059	ENSMFAG00000034419	RTCB	100	94.059	Macaca_fascicularis
ENSFHEG00000009595	rtcb	100	94.059	ENSMMUG00000006720	RTCB	100	94.059	Macaca_mulatta
ENSFHEG00000009595	rtcb	100	94.059	ENSMNEG00000040669	RTCB	100	94.059	Macaca_nemestrina
ENSFHEG00000009595	rtcb	100	94.257	ENSMLEG00000040505	RTCB	100	94.257	Mandrillus_leucophaeus
ENSFHEG00000009595	rtcb	100	97.030	ENSMAMG00000020676	rtcb	100	97.030	Mastacembelus_armatus
ENSFHEG00000009595	rtcb	100	95.842	ENSMZEG00005018942	rtcb	100	95.842	Maylandia_zebra
ENSFHEG00000009595	rtcb	100	93.688	ENSMGAG00000012805	RTCB	100	93.688	Meleagris_gallopavo
ENSFHEG00000009595	rtcb	60	100.000	ENSMAUG00000008301	Rtcb	100	100.000	Mesocricetus_auratus
ENSFHEG00000009595	rtcb	100	74.851	ENSMICG00000036677	-	100	74.851	Microcebus_murinus
ENSFHEG00000009595	rtcb	100	94.257	ENSMICG00000013303	-	100	94.257	Microcebus_murinus
ENSFHEG00000009595	rtcb	100	94.455	ENSMOCG00000002440	Rtcb	100	94.455	Microtus_ochrogaster
ENSFHEG00000009595	rtcb	100	96.634	ENSMMOG00000005987	rtcb	100	96.634	Mola_mola
ENSFHEG00000009595	rtcb	100	93.861	ENSMODG00000001414	RTCB	100	93.861	Monodelphis_domestica
ENSFHEG00000009595	rtcb	100	97.624	ENSMALG00000007603	rtcb	100	97.624	Monopterus_albus
ENSFHEG00000009595	rtcb	100	94.059	MGP_CAROLIEiJ_G0015689	Rtcb	100	94.059	Mus_caroli
ENSFHEG00000009595	rtcb	100	94.059	ENSMUSG00000001783	Rtcb	100	94.059	Mus_musculus
ENSFHEG00000009595	rtcb	100	94.059	MGP_PahariEiJ_G0031396	Rtcb	100	94.059	Mus_pahari
ENSFHEG00000009595	rtcb	100	94.059	MGP_SPRETEiJ_G0016507	Rtcb	100	94.059	Mus_spretus
ENSFHEG00000009595	rtcb	100	94.455	ENSMPUG00000012285	RTCB	100	94.455	Mustela_putorius_furo
ENSFHEG00000009595	rtcb	100	91.519	ENSMLUG00000007803	RTCB	100	91.519	Myotis_lucifugus
ENSFHEG00000009595	rtcb	72	100.000	ENSNGAG00000005093	Rtcb	100	100.000	Nannospalax_galili
ENSFHEG00000009595	rtcb	100	96.040	ENSNBRG00000017202	rtcb	100	96.040	Neolamprologus_brichardi
ENSFHEG00000009595	rtcb	100	94.455	ENSNLEG00000004960	RTCB	100	94.455	Nomascus_leucogenys
ENSFHEG00000009595	rtcb	88	100.000	ENSMEUG00000007809	-	88	100.000	Notamacropus_eugenii
ENSFHEG00000009595	rtcb	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSFHEG00000009595	rtcb	100	62.772	ENSODEG00000005042	-	100	62.772	Octodon_degus
ENSFHEG00000009595	rtcb	82	100.000	ENSODEG00000013033	-	100	100.000	Octodon_degus
ENSFHEG00000009595	rtcb	100	96.634	ENSONIG00000007474	rtcb	100	96.634	Oreochromis_niloticus
ENSFHEG00000009595	rtcb	100	93.663	ENSOANG00000005524	RTCB	100	93.663	Ornithorhynchus_anatinus
ENSFHEG00000009595	rtcb	93	94.043	ENSOCUG00000008270	RTCB	96	94.043	Oryctolagus_cuniculus
ENSFHEG00000009595	rtcb	100	96.238	ENSORLG00000020093	rtcb	100	96.238	Oryzias_latipes
ENSFHEG00000009595	rtcb	100	96.238	ENSORLG00020003706	rtcb	99	97.263	Oryzias_latipes_hni
ENSFHEG00000009595	rtcb	100	96.436	ENSORLG00015002968	rtcb	100	96.436	Oryzias_latipes_hsok
ENSFHEG00000009595	rtcb	100	96.040	ENSOMEG00000021278	rtcb	100	96.040	Oryzias_melastigma
ENSFHEG00000009595	rtcb	100	93.663	ENSOGAG00000001425	RTCB	100	93.663	Otolemur_garnettii
ENSFHEG00000009595	rtcb	100	94.653	ENSOARG00000018008	RTCB	100	94.653	Ovis_aries
ENSFHEG00000009595	rtcb	100	94.455	ENSPPAG00000028667	RTCB	100	94.455	Pan_paniscus
ENSFHEG00000009595	rtcb	100	94.455	ENSPPRG00000004038	RTCB	100	94.455	Panthera_pardus
ENSFHEG00000009595	rtcb	94	90.316	ENSPTIG00000020499	RTCB	97	91.368	Panthera_tigris_altaica
ENSFHEG00000009595	rtcb	100	94.455	ENSPTRG00000014287	RTCB	100	94.455	Pan_troglodytes
ENSFHEG00000009595	rtcb	100	94.059	ENSPANG00000016035	RTCB	100	94.059	Papio_anubis
ENSFHEG00000009595	rtcb	100	94.851	ENSPKIG00000001881	rtcb	100	94.851	Paramormyrops_kingsleyae
ENSFHEG00000009595	rtcb	91	94.783	ENSPSIG00000011690	RTCB	100	94.783	Pelodiscus_sinensis
ENSFHEG00000009595	rtcb	100	96.040	ENSPMGG00000016672	rtcb	100	96.040	Periophthalmus_magnuspinnatus
ENSFHEG00000009595	rtcb	100	94.059	ENSPEMG00000019548	Rtcb	100	94.059	Peromyscus_maniculatus_bairdii
ENSFHEG00000009595	rtcb	100	91.683	ENSPMAG00000005657	rtcb	100	91.683	Petromyzon_marinus
ENSFHEG00000009595	rtcb	100	93.861	ENSPCIG00000009467	RTCB	100	93.861	Phascolarctos_cinereus
ENSFHEG00000009595	rtcb	100	98.416	ENSPFOG00000003058	rtcb	100	98.416	Poecilia_formosa
ENSFHEG00000009595	rtcb	100	98.416	ENSPLAG00000017663	rtcb	100	98.416	Poecilia_latipinna
ENSFHEG00000009595	rtcb	100	98.416	ENSPMEG00000006227	rtcb	100	98.416	Poecilia_mexicana
ENSFHEG00000009595	rtcb	100	98.218	ENSPREG00000018467	rtcb	100	98.218	Poecilia_reticulata
ENSFHEG00000009595	rtcb	100	94.455	ENSPPYG00000011752	RTCB	100	94.455	Pongo_abelii
ENSFHEG00000009595	rtcb	93	77.542	ENSPCAG00000013641	RTCB	100	77.542	Procavia_capensis
ENSFHEG00000009595	rtcb	100	94.257	ENSPCOG00000017243	RTCB	100	94.257	Propithecus_coquereli
ENSFHEG00000009595	rtcb	93	93.191	ENSPVAG00000002380	RTCB	100	93.191	Pteropus_vampyrus
ENSFHEG00000009595	rtcb	100	95.842	ENSPNYG00000022760	rtcb	100	95.842	Pundamilia_nyererei
ENSFHEG00000009595	rtcb	100	95.842	ENSPNAG00000009209	rtcb	100	95.842	Pygocentrus_nattereri
ENSFHEG00000009595	rtcb	100	94.059	ENSRNOG00000004813	Rtcb	100	94.059	Rattus_norvegicus
ENSFHEG00000009595	rtcb	100	86.166	ENSRBIG00000042090	RTCB	100	86.166	Rhinopithecus_bieti
ENSFHEG00000009595	rtcb	100	89.505	ENSSBOG00000020085	-	100	89.505	Saimiri_boliviensis_boliviensis
ENSFHEG00000009595	rtcb	94	95.148	ENSSHAG00000016277	RTCB	100	95.148	Sarcophilus_harrisii
ENSFHEG00000009595	rtcb	100	93.663	ENSSFOG00015011572	RTCB	100	93.663	Scleropages_formosus
ENSFHEG00000009595	rtcb	100	94.851	ENSSFOG00015000763	rtcb	100	94.851	Scleropages_formosus
ENSFHEG00000009595	rtcb	100	93.267	ENSSMAG00000005096	rtcb	100	93.267	Scophthalmus_maximus
ENSFHEG00000009595	rtcb	100	96.238	ENSSDUG00000012605	rtcb	100	96.238	Seriola_dumerili
ENSFHEG00000009595	rtcb	100	96.238	ENSSLDG00000019458	rtcb	100	96.238	Seriola_lalandi_dorsalis
ENSFHEG00000009595	rtcb	66	100.000	ENSSARG00000004799	-	70	100.000	Sorex_araneus
ENSFHEG00000009595	rtcb	100	93.861	ENSSPUG00000012814	RTCB	100	93.861	Sphenodon_punctatus
ENSFHEG00000009595	rtcb	100	97.426	ENSSPAG00000004623	rtcb	100	97.426	Stegastes_partitus
ENSFHEG00000009595	rtcb	100	94.455	ENSSSCG00000000158	RTCB	100	94.455	Sus_scrofa
ENSFHEG00000009595	rtcb	100	94.455	ENSTGUG00000010947	RTCB	99	94.455	Taeniopygia_guttata
ENSFHEG00000009595	rtcb	91	97.174	ENSTRUG00000009880	rtcb	100	97.174	Takifugu_rubripes
ENSFHEG00000009595	rtcb	100	95.050	ENSTNIG00000002484	rtcb	100	95.050	Tetraodon_nigroviridis
ENSFHEG00000009595	rtcb	100	80.990	ENSTBEG00000004418	RTCB	100	80.990	Tupaia_belangeri
ENSFHEG00000009595	rtcb	93	93.617	ENSTTRG00000006417	RTCB	100	93.617	Tursiops_truncatus
ENSFHEG00000009595	rtcb	100	94.455	ENSUAMG00000022792	RTCB	100	94.455	Ursus_americanus
ENSFHEG00000009595	rtcb	100	94.455	ENSUMAG00000017225	RTCB	100	94.455	Ursus_maritimus
ENSFHEG00000009595	rtcb	100	94.257	ENSVPAG00000005375	RTCB	100	94.257	Vicugna_pacos
ENSFHEG00000009595	rtcb	100	94.455	ENSVVUG00000023408	RTCB	100	95.086	Vulpes_vulpes
ENSFHEG00000009595	rtcb	100	93.465	ENSXETG00000011523	rtcb	100	93.465	Xenopus_tropicalis
ENSFHEG00000009595	rtcb	100	98.020	ENSXMAG00000002855	rtcb	100	98.020	Xiphophorus_maculatus