EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000009619 (Gene tree)
Gene ID: -
Gene Symbol: si:ch73-14h10.2
Alias: wu:fe48h10|zgc:101795
Full Name: LSM2 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 1164 bases
Position: chrKN811284.1:2660575-2661738
Accession: 105925371
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000026650	LSM	PF01423.22	5.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000002171	-	288	XM_012861168	ENSFHEP00000026650	95 (aa)	XP_012716622	-

Gene Model

Click here to download ENSFHEG00000009619's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000009619's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSG00000204392	LSM2	99	95.833	Homo_sapiens
ENSFHEG00000009619	si:ch73-14h10.2	100	96.875	ENSAPOG00000017967	si:ch73-14h10.2	99	96.875	Acanthochromis_polyacanthus
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSAMEG00000006483	LSM2	100	95.833	Ailuropoda_melanoleuca
ENSFHEG00000009619	si:ch73-14h10.2	100	96.875	ENSACIG00000007795	si:ch73-14h10.2	62	96.875	Amphilophus_citrinellus
ENSFHEG00000009619	si:ch73-14h10.2	100	96.875	ENSAOCG00000006949	si:ch73-14h10.2	78	96.875	Amphiprion_ocellaris
ENSFHEG00000009619	si:ch73-14h10.2	100	96.875	ENSAPEG00000020375	si:ch73-14h10.2	87	96.875	Amphiprion_percula
ENSFHEG00000009619	si:ch73-14h10.2	100	96.875	ENSATEG00000011376	si:ch73-14h10.2	99	96.875	Anabas_testudineus
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSACAG00000017281	LSM2	90	95.833	Anolis_carolinensis
ENSFHEG00000009619	si:ch73-14h10.2	97	77.419	ENSANAG00000028033	-	96	77.419	Aotus_nancymaae
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSANAG00000028372	LSM2	99	95.833	Aotus_nancymaae
ENSFHEG00000009619	si:ch73-14h10.2	100	96.875	ENSACLG00000024717	smx5	99	96.875	Astatotilapia_calliptera
ENSFHEG00000009619	si:ch73-14h10.2	100	96.875	ENSAMXG00000036868	si:ch73-14h10.2	99	96.875	Astyanax_mexicanus
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSBTAG00000005634	LSM2	99	95.833	Bos_taurus
ENSFHEG00000009619	si:ch73-14h10.2	99	80.000	WBGene00001808	gut-2	96	80.000	Caenorhabditis_elegans
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSCJAG00000040899	LSM2	99	95.833	Callithrix_jacchus
ENSFHEG00000009619	si:ch73-14h10.2	78	93.243	ENSCAFG00020016978	-	89	93.243	Canis_lupus_dingo
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSCHIG00000016153	LSM2	100	95.833	Capra_hircus
ENSFHEG00000009619	si:ch73-14h10.2	99	86.316	ENSTSYG00000030015	-	99	86.316	Carlito_syrichta
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSTSYG00000034844	LSM2	99	95.833	Carlito_syrichta
ENSFHEG00000009619	si:ch73-14h10.2	79	94.667	ENSCAPG00000009970	LSM2	94	94.667	Cavia_aperea
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSCPOG00000021053	LSM2	99	95.833	Cavia_porcellus
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSCCAG00000024276	LSM2	99	95.833	Cebus_capucinus
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSCATG00000013737	LSM2	99	95.833	Cercocebus_atys
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSCLAG00000008081	LSM2	99	95.833	Chinchilla_lanigera
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSCSAG00000008800	LSM2	99	95.833	Chlorocebus_sabaeus
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSCHOG00000007702	LSM2	99	95.833	Choloepus_hoffmanni
ENSFHEG00000009619	si:ch73-14h10.2	100	92.708	ENSCING00000022677	-	99	92.708	Ciona_intestinalis
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSCANG00000039576	LSM2	99	95.833	Colobus_angolensis_palliatus
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSCGRG00001013932	Lsm2	99	95.833	Cricetulus_griseus_chok1gshd
ENSFHEG00000009619	si:ch73-14h10.2	79	94.667	ENSCGRG00000013311	Lsm2	63	94.667	Cricetulus_griseus_crigri
ENSFHEG00000009619	si:ch73-14h10.2	100	96.875	ENSCSEG00000002911	si:ch73-14h10.2	99	96.875	Cynoglossus_semilaevis
ENSFHEG00000009619	si:ch73-14h10.2	100	96.875	ENSCVAG00000015394	si:ch73-14h10.2	89	96.875	Cyprinodon_variegatus
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSDARG00000070867	smx5	99	95.833	Danio_rerio
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSDNOG00000002633	LSM2	100	95.833	Dasypus_novemcinctus
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSDORG00000026571	Lsm2	99	95.833	Dipodomys_ordii
ENSFHEG00000009619	si:ch73-14h10.2	96	92.391	FBgn0036277	CG10418	95	92.391	Drosophila_melanogaster
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSEASG00005015670	LSM2	79	95.833	Equus_asinus_asinus
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSECAG00000018791	LSM2	79	95.833	Equus_caballus
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSELUG00000008241	smx5	99	95.833	Esox_lucius
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSFCAG00000045887	LSM2	99	95.833	Felis_catus
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSFDAG00000000390	LSM2	99	95.833	Fukomys_damarensis
ENSFHEG00000009619	si:ch73-14h10.2	100	96.875	ENSGMOG00000019208	si:ch73-14h10.2	100	96.875	Gadus_morhua
ENSFHEG00000009619	si:ch73-14h10.2	100	96.875	ENSGAFG00000017286	si:ch73-14h10.2	99	96.875	Gambusia_affinis
ENSFHEG00000009619	si:ch73-14h10.2	100	96.875	ENSGACG00000003827	si:ch73-14h10.2	99	96.875	Gasterosteus_aculeatus
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSGAGG00000012458	LSM2	99	95.833	Gopherus_agassizii
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSGGOG00000011383	LSM2	99	95.833	Gorilla_gorilla
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSHGLG00000011299	LSM2	99	95.833	Heterocephalus_glaber_female
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSHGLG00100017194	LSM2	99	95.833	Heterocephalus_glaber_male
ENSFHEG00000009619	si:ch73-14h10.2	100	96.875	ENSHCOG00000014057	si:ch73-14h10.2	99	96.875	Hippocampus_comes
ENSFHEG00000009619	si:ch73-14h10.2	100	96.875	ENSIPUG00000010539	lsm2	99	96.875	Ictalurus_punctatus
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSSTOG00000013144	LSM2	99	95.833	Ictidomys_tridecemlineatus
ENSFHEG00000009619	si:ch73-14h10.2	95	73.626	ENSJJAG00000019477	-	100	73.626	Jaculus_jaculus
ENSFHEG00000009619	si:ch73-14h10.2	100	96.875	ENSKMAG00000014909	si:ch73-14h10.2	99	96.875	Kryptolebias_marmoratus
ENSFHEG00000009619	si:ch73-14h10.2	100	97.895	ENSLBEG00000025781	si:ch73-14h10.2	98	97.895	Labrus_bergylta
ENSFHEG00000009619	si:ch73-14h10.2	100	96.875	ENSLACG00000015064	LSM2	99	96.875	Latimeria_chalumnae
ENSFHEG00000009619	si:ch73-14h10.2	100	96.875	ENSLOCG00000005228	si:ch73-14h10.2	99	96.875	Lepisosteus_oculatus
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSLAFG00000016139	LSM2	100	95.833	Loxodonta_africana
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSMFAG00000001016	LSM2	99	95.833	Macaca_fascicularis
ENSFHEG00000009619	si:ch73-14h10.2	100	78.125	ENSMMUG00000045473	-	97	78.125	Macaca_mulatta
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSMMUG00000006832	LSM2	99	95.833	Macaca_mulatta
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSMNEG00000045355	LSM2	99	95.833	Macaca_nemestrina
ENSFHEG00000009619	si:ch73-14h10.2	80	80.519	ENSMNEG00000040973	-	91	80.519	Macaca_nemestrina
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSMLEG00000037369	-	99	95.833	Mandrillus_leucophaeus
ENSFHEG00000009619	si:ch73-14h10.2	100	77.083	ENSMLEG00000031181	-	97	77.083	Mandrillus_leucophaeus
ENSFHEG00000009619	si:ch73-14h10.2	100	96.875	ENSMAMG00000010053	si:ch73-14h10.2	72	96.875	Mastacembelus_armatus
ENSFHEG00000009619	si:ch73-14h10.2	100	98.958	ENSMZEG00005008688	si:ch73-14h10.2	100	98.958	Maylandia_zebra
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSMAUG00000021966	Lsm2	99	95.833	Mesocricetus_auratus
ENSFHEG00000009619	si:ch73-14h10.2	79	76.000	ENSMICG00000046764	-	93	76.000	Microcebus_murinus
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSMOCG00000015306	Lsm2	99	95.833	Microtus_ochrogaster
ENSFHEG00000009619	si:ch73-14h10.2	100	97.895	ENSMMOG00000005603	si:ch73-14h10.2	100	97.895	Mola_mola
ENSFHEG00000009619	si:ch73-14h10.2	100	96.875	ENSMODG00000015177	LSM2	99	96.875	Monodelphis_domestica
ENSFHEG00000009619	si:ch73-14h10.2	100	96.875	ENSMALG00000016490	si:ch73-14h10.2	99	96.875	Monopterus_albus
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	MGP_CAROLIEiJ_G0021490	Lsm2	99	95.833	Mus_caroli
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSMUSG00000007050	Lsm2	99	95.833	Mus_musculus
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	MGP_PahariEiJ_G0020485	Lsm2	99	95.833	Mus_pahari
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	MGP_SPRETEiJ_G0022395	Lsm2	99	95.833	Mus_spretus
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSNGAG00000003997	Lsm2	99	95.833	Nannospalax_galili
ENSFHEG00000009619	si:ch73-14h10.2	100	98.958	ENSNBRG00000012904	si:ch73-14h10.2	100	98.958	Neolamprologus_brichardi
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSNLEG00000035542	LSM2	99	95.833	Nomascus_leucogenys
ENSFHEG00000009619	si:ch73-14h10.2	77	97.260	ENSMEUG00000003419	LSM2	100	97.260	Notamacropus_eugenii
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSOPRG00000003668	LSM2	99	95.833	Ochotona_princeps
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSODEG00000017583	LSM2	99	95.833	Octodon_degus
ENSFHEG00000009619	si:ch73-14h10.2	100	96.875	ENSONIG00000019321	si:ch73-14h10.2	99	96.875	Oreochromis_niloticus
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSOANG00000005398	LSM2	100	95.833	Ornithorhynchus_anatinus
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSOCUG00000002583	LSM2	99	95.833	Oryctolagus_cuniculus
ENSFHEG00000009619	si:ch73-14h10.2	100	96.875	ENSORLG00000029858	si:ch73-14h10.2	99	96.875	Oryzias_latipes
ENSFHEG00000009619	si:ch73-14h10.2	100	77.236	ENSORLG00015000465	si:ch73-14h10.2	99	77.236	Oryzias_latipes_hsok
ENSFHEG00000009619	si:ch73-14h10.2	100	96.875	ENSOMEG00000002892	si:ch73-14h10.2	99	96.875	Oryzias_melastigma
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSOARG00000004575	LSM2	100	95.833	Ovis_aries
ENSFHEG00000009619	si:ch73-14h10.2	80	81.818	ENSPPAG00000043941	-	93	81.818	Pan_paniscus
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSPPAG00000032431	LSM2	99	95.833	Pan_paniscus
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSPPRG00000015353	LSM2	99	95.833	Panthera_pardus
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSPTIG00000010303	LSM2	99	95.833	Panthera_tigris_altaica
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSPTRG00000017986	LSM2	99	95.833	Pan_troglodytes
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSPANG00000024577	LSM2	99	95.833	Papio_anubis
ENSFHEG00000009619	si:ch73-14h10.2	100	96.875	ENSPKIG00000007028	si:ch73-14h10.2	99	96.875	Paramormyrops_kingsleyae
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSPSIG00000004458	LSM2	78	95.833	Pelodiscus_sinensis
ENSFHEG00000009619	si:ch73-14h10.2	100	96.842	ENSPMGG00000018511	si:ch73-14h10.2	100	96.842	Periophthalmus_magnuspinnatus
ENSFHEG00000009619	si:ch73-14h10.2	100	96.875	ENSPCIG00000018560	-	95	96.875	Phascolarctos_cinereus
ENSFHEG00000009619	si:ch73-14h10.2	100	96.875	ENSPFOG00000001621	si:ch73-14h10.2	99	96.875	Poecilia_formosa
ENSFHEG00000009619	si:ch73-14h10.2	100	96.875	ENSPLAG00000017165	si:ch73-14h10.2	99	96.875	Poecilia_latipinna
ENSFHEG00000009619	si:ch73-14h10.2	100	96.875	ENSPMEG00000019574	si:ch73-14h10.2	99	96.875	Poecilia_mexicana
ENSFHEG00000009619	si:ch73-14h10.2	100	97.895	ENSPREG00000016534	si:ch73-14h10.2	100	97.895	Poecilia_reticulata
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSPPYG00000016461	-	53	95.833	Pongo_abelii
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSPCAG00000013737	LSM2	99	95.833	Procavia_capensis
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSPCOG00000020134	LSM2	99	95.833	Propithecus_coquereli
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSPVAG00000012405	LSM2	99	95.833	Pteropus_vampyrus
ENSFHEG00000009619	si:ch73-14h10.2	100	96.875	ENSPNYG00000019298	smx5	99	96.875	Pundamilia_nyererei
ENSFHEG00000009619	si:ch73-14h10.2	100	96.875	ENSPNAG00000027769	si:ch73-14h10.2	99	96.875	Pygocentrus_nattereri
ENSFHEG00000009619	si:ch73-14h10.2	55	90.566	ENSRNOG00000011065	AC126899.1	76	90.566	Rattus_norvegicus
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSRNOG00000048725	Lsm2	99	95.833	Rattus_norvegicus
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSRBIG00000010172	LSM2	99	95.833	Rhinopithecus_bieti
ENSFHEG00000009619	si:ch73-14h10.2	80	81.818	ENSRBIG00000011356	-	91	81.818	Rhinopithecus_bieti
ENSFHEG00000009619	si:ch73-14h10.2	80	81.818	ENSRROG00000030708	-	91	81.818	Rhinopithecus_roxellana
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSRROG00000030345	LSM2	99	95.833	Rhinopithecus_roxellana
ENSFHEG00000009619	si:ch73-14h10.2	100	62.500	YBL026W	LSM2	99	62.500	Saccharomyces_cerevisiae
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSSBOG00000018943	LSM2	99	95.833	Saimiri_boliviensis_boliviensis
ENSFHEG00000009619	si:ch73-14h10.2	100	96.875	ENSSFOG00015006734	lsm2	99	96.875	Scleropages_formosus
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSSMAG00000001122	si:ch73-14h10.2	99	95.833	Scophthalmus_maximus
ENSFHEG00000009619	si:ch73-14h10.2	100	96.875	ENSSDUG00000021605	smx5	99	96.875	Seriola_dumerili
ENSFHEG00000009619	si:ch73-14h10.2	100	96.875	ENSSLDG00000002765	si:ch73-14h10.2	99	96.875	Seriola_lalandi_dorsalis
ENSFHEG00000009619	si:ch73-14h10.2	100	96.875	ENSSPUG00000009631	LSM2	99	96.875	Sphenodon_punctatus
ENSFHEG00000009619	si:ch73-14h10.2	100	96.875	ENSSPAG00000016904	si:ch73-14h10.2	99	96.875	Stegastes_partitus
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSSSCG00000039021	LSM2	99	95.833	Sus_scrofa
ENSFHEG00000009619	si:ch73-14h10.2	100	97.895	ENSTRUG00000002093	si:ch73-14h10.2	100	97.895	Takifugu_rubripes
ENSFHEG00000009619	si:ch73-14h10.2	71	91.176	ENSTNIG00000013770	si:ch73-14h10.2	99	91.176	Tetraodon_nigroviridis
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSTTRG00000014131	LSM2	99	95.833	Tursiops_truncatus
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSUMAG00000013425	LSM2	65	95.833	Ursus_maritimus
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSVPAG00000001761	LSM2	100	95.833	Vicugna_pacos
ENSFHEG00000009619	si:ch73-14h10.2	80	93.506	ENSVVUG00000016264	-	93	93.506	Vulpes_vulpes
ENSFHEG00000009619	si:ch73-14h10.2	100	95.833	ENSXETG00000024077	lsm2	99	95.833	Xenopus_tropicalis
ENSFHEG00000009619	si:ch73-14h10.2	100	97.895	ENSXCOG00000006078	si:ch73-14h10.2	100	97.895	Xiphophorus_couchianus
ENSFHEG00000009619	si:ch73-14h10.2	100	97.895	ENSXMAG00000028018	si:ch73-14h10.2	100	97.895	Xiphophorus_maculatus