EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000009794 (Gene tree)
Gene ID: 105935046
Gene Symbol: -
Alias: -
Full Name: transcriptional repressor scratch 1-like
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 8863 bases
Position: chrKN811447.1:2084550-2093412
Accession: 105935046
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000026764	zf-C2H2	PF00096.26	3.3e-25	1	4
ENSFHEP00000026764	zf-C2H2	PF00096.26	3.3e-25	2	4
ENSFHEP00000026764	zf-C2H2	PF00096.26	3.3e-25	3	4
ENSFHEP00000026764	zf-C2H2	PF00096.26	3.3e-25	4	4
ENSFHEP00000026764	zf-met	PF12874.7	7.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000001872	-	900	XM_012875270	ENSFHEP00000026764	299 (aa)	XP_012730724	A0A146ZT49

Gene Model

Click here to download ENSFHEG00000009794's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000009794's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000009794	-	97	65.172	ENSFHEG00000005732	scrt2	96	65.172
ENSFHEG00000009794	-	99	76.333	ENSFHEG00000014820	scrt1b	99	76.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000009794	-	99	77.000	ENSAPOG00000009279	scrt1b	99	77.000	Acanthochromis_polyacanthus
ENSFHEG00000009794	-	97	63.103	ENSAPOG00000003680	scrt2	96	63.103	Acanthochromis_polyacanthus
ENSFHEG00000009794	-	100	88.963	ENSAPOG00000015197	-	100	88.963	Acanthochromis_polyacanthus
ENSFHEG00000009794	-	97	54.952	ENSACIG00000001296	-	96	53.674	Amphilophus_citrinellus
ENSFHEG00000009794	-	99	75.585	ENSACIG00000013613	scrt1b	99	75.585	Amphilophus_citrinellus
ENSFHEG00000009794	-	100	94.649	ENSACIG00000006586	-	100	94.649	Amphilophus_citrinellus
ENSFHEG00000009794	-	97	61.279	ENSACIG00000012604	scrt2	96	61.279	Amphilophus_citrinellus
ENSFHEG00000009794	-	97	63.103	ENSAOCG00000021557	scrt2	96	63.103	Amphiprion_ocellaris
ENSFHEG00000009794	-	99	77.000	ENSAOCG00000003910	scrt1b	99	77.000	Amphiprion_ocellaris
ENSFHEG00000009794	-	100	95.652	ENSAOCG00000023304	-	100	95.652	Amphiprion_ocellaris
ENSFHEG00000009794	-	99	76.667	ENSAPEG00000000869	scrt1b	99	76.667	Amphiprion_percula
ENSFHEG00000009794	-	100	95.652	ENSAPEG00000005677	-	100	95.652	Amphiprion_percula
ENSFHEG00000009794	-	97	63.103	ENSAPEG00000022558	scrt2	96	63.103	Amphiprion_percula
ENSFHEG00000009794	-	100	86.288	ENSATEG00000011660	-	100	86.288	Anabas_testudineus
ENSFHEG00000009794	-	99	75.585	ENSATEG00000002302	scrt1b	99	76.667	Anabas_testudineus
ENSFHEG00000009794	-	97	60.938	ENSATEG00000023998	scrt2	97	60.938	Anabas_testudineus
ENSFHEG00000009794	-	97	53.731	ENSATEG00000003195	-	97	53.731	Anabas_testudineus
ENSFHEG00000009794	-	68	77.941	ENSACAG00000016109	SCRT2	91	77.941	Anolis_carolinensis
ENSFHEG00000009794	-	99	76.667	ENSACLG00000007162	scrt1b	99	76.667	Astatotilapia_calliptera
ENSFHEG00000009794	-	100	91.089	ENSACLG00000012046	-	100	91.089	Astatotilapia_calliptera
ENSFHEG00000009794	-	99	79.530	ENSAMXG00000038085	scrt1a	99	79.530	Astyanax_mexicanus
ENSFHEG00000009794	-	98	73.986	ENSAMXG00000042624	SCRT1	99	73.986	Astyanax_mexicanus
ENSFHEG00000009794	-	83	68.400	ENSAMXG00000034158	scrt2	87	68.400	Astyanax_mexicanus
ENSFHEG00000009794	-	55	60.123	WBGene00000468	ces-1	79	48.035	Caenorhabditis_elegans
ENSFHEG00000009794	-	87	56.929	ENSCPBG00000027613	SCRT2	100	56.929	Chrysemys_picta_bellii
ENSFHEG00000009794	-	99	75.503	ENSCPBG00000018899	SCRT1	99	75.503	Chrysemys_picta_bellii
ENSFHEG00000009794	-	100	92.308	ENSCSEG00000014892	-	100	92.308	Cynoglossus_semilaevis
ENSFHEG00000009794	-	97	62.102	ENSCSEG00000021542	scrt2	97	62.102	Cynoglossus_semilaevis
ENSFHEG00000009794	-	99	75.585	ENSCSEG00000008596	scrt1b	99	76.333	Cynoglossus_semilaevis
ENSFHEG00000009794	-	99	76.000	ENSCVAG00000009561	scrt1b	99	76.000	Cyprinodon_variegatus
ENSFHEG00000009794	-	97	59.561	ENSCVAG00000021038	scrt2	97	59.561	Cyprinodon_variegatus
ENSFHEG00000009794	-	100	96.656	ENSCVAG00000003190	-	100	96.656	Cyprinodon_variegatus
ENSFHEG00000009794	-	99	77.852	ENSDARG00000100821	scrt1a	99	77.852	Danio_rerio
ENSFHEG00000009794	-	99	75.839	ENSDARG00000040214	scrt1b	99	75.839	Danio_rerio
ENSFHEG00000009794	-	100	76.667	ENSELUG00000022228	scrt1a	100	76.667	Esox_lucius
ENSFHEG00000009794	-	96	61.290	ENSELUG00000023883	scrt2	95	60.968	Esox_lucius
ENSFHEG00000009794	-	99	77.703	ENSELUG00000005435	scrt1b	98	77.703	Esox_lucius
ENSFHEG00000009794	-	67	78.000	ENSFALG00000005718	SCRT2	83	78.500	Ficedula_albicollis
ENSFHEG00000009794	-	56	96.032	ENSGMOG00000013833	-	56	96.032	Gadus_morhua
ENSFHEG00000009794	-	99	75.920	ENSGMOG00000000629	scrt1b	99	75.920	Gadus_morhua
ENSFHEG00000009794	-	97	56.604	ENSGMOG00000019519	scrt2	96	56.604	Gadus_morhua
ENSFHEG00000009794	-	97	60.690	ENSGALG00000028912	SCRT2	97	61.724	Gallus_gallus
ENSFHEG00000009794	-	100	86.957	ENSGAFG00000009650	-	100	86.957	Gambusia_affinis
ENSFHEG00000009794	-	97	62.215	ENSGAFG00000003093	scrt2	97	62.215	Gambusia_affinis
ENSFHEG00000009794	-	99	76.667	ENSGAFG00000007636	scrt1b	99	76.667	Gambusia_affinis
ENSFHEG00000009794	-	100	88.629	ENSGACG00000004072	-	100	88.629	Gasterosteus_aculeatus
ENSFHEG00000009794	-	99	74.832	ENSGACG00000008982	scrt1b	99	74.832	Gasterosteus_aculeatus
ENSFHEG00000009794	-	59	80.791	ENSGAGG00000020760	-	68	81.356	Gopherus_agassizii
ENSFHEG00000009794	-	96	61.111	ENSGAGG00000020761	SCRT2	96	61.458	Gopherus_agassizii
ENSFHEG00000009794	-	99	76.014	ENSGAGG00000011736	SCRT1	99	76.014	Gopherus_agassizii
ENSFHEG00000009794	-	99	76.667	ENSHBUG00000016621	scrt1b	99	76.667	Haplochromis_burtoni
ENSFHEG00000009794	-	100	93.980	ENSHBUG00000019101	-	100	93.980	Haplochromis_burtoni
ENSFHEG00000009794	-	97	63.793	ENSHBUG00000012492	scrt2	96	63.793	Haplochromis_burtoni
ENSFHEG00000009794	-	100	73.115	ENSHCOG00000016179	-	100	73.443	Hippocampus_comes
ENSFHEG00000009794	-	97	59.871	ENSHCOG00000008116	scrt2	97	59.871	Hippocampus_comes
ENSFHEG00000009794	-	99	75.667	ENSHCOG00000016704	scrt1b	99	75.667	Hippocampus_comes
ENSFHEG00000009794	-	98	77.966	ENSIPUG00000004551	scrt1a	99	77.966	Ictalurus_punctatus
ENSFHEG00000009794	-	98	71.769	ENSIPUG00000005547	-	99	71.769	Ictalurus_punctatus
ENSFHEG00000009794	-	99	76.333	ENSKMAG00000005484	scrt1b	99	76.333	Kryptolebias_marmoratus
ENSFHEG00000009794	-	100	94.684	ENSKMAG00000009489	-	100	94.684	Kryptolebias_marmoratus
ENSFHEG00000009794	-	97	60.188	ENSKMAG00000018087	scrt2	97	60.188	Kryptolebias_marmoratus
ENSFHEG00000009794	-	97	60.436	ENSLBEG00000015419	scrt2	97	59.813	Labrus_bergylta
ENSFHEG00000009794	-	100	92.308	ENSLBEG00000023388	-	100	92.308	Labrus_bergylta
ENSFHEG00000009794	-	99	75.503	ENSLACG00000003588	SCRT1	99	75.503	Latimeria_chalumnae
ENSFHEG00000009794	-	99	77.852	ENSLOCG00000007573	scrt1b	99	77.852	Lepisosteus_oculatus
ENSFHEG00000009794	-	97	52.761	ENSLOCG00000002246	scrt2	97	53.211	Lepisosteus_oculatus
ENSFHEG00000009794	-	96	91.852	ENSMFAG00000035496	SCRT1	71	86.184	Macaca_fascicularis
ENSFHEG00000009794	-	97	60.312	ENSMAMG00000001291	scrt2	97	60.312	Mastacembelus_armatus
ENSFHEG00000009794	-	99	75.585	ENSMAMG00000011698	scrt1b	99	76.667	Mastacembelus_armatus
ENSFHEG00000009794	-	97	63.793	ENSMZEG00005026445	scrt2	96	63.793	Maylandia_zebra
ENSFHEG00000009794	-	100	93.980	ENSMZEG00005026702	-	100	93.980	Maylandia_zebra
ENSFHEG00000009794	-	99	76.667	ENSMZEG00005005627	scrt1b	99	76.667	Maylandia_zebra
ENSFHEG00000009794	-	65	80.311	ENSMGAG00000016579	SCRT2	80	80.311	Meleagris_gallopavo
ENSFHEG00000009794	-	99	75.000	ENSMMOG00000003327	scrt1b	99	75.000	Mola_mola
ENSFHEG00000009794	-	100	92.667	ENSMMOG00000018345	-	100	92.667	Mola_mola
ENSFHEG00000009794	-	97	60.568	ENSMMOG00000009272	scrt2	97	60.883	Mola_mola
ENSFHEG00000009794	-	99	76.254	ENSMALG00000012704	scrt1b	99	77.333	Monopterus_albus
ENSFHEG00000009794	-	97	63.014	ENSMALG00000013656	scrt2	96	63.014	Monopterus_albus
ENSFHEG00000009794	-	60	68.108	ENSNGAG00000020815	Scrt2	91	67.368	Nannospalax_galili
ENSFHEG00000009794	-	100	94.314	ENSNBRG00000014882	-	100	94.314	Neolamprologus_brichardi
ENSFHEG00000009794	-	99	73.579	ENSNBRG00000013983	scrt1b	99	73.579	Neolamprologus_brichardi
ENSFHEG00000009794	-	97	63.448	ENSNBRG00000007221	scrt2	96	63.448	Neolamprologus_brichardi
ENSFHEG00000009794	-	97	90.492	ENSONIG00000019809	-	100	90.492	Oreochromis_niloticus
ENSFHEG00000009794	-	97	57.388	ENSONIG00000003152	-	96	57.388	Oreochromis_niloticus
ENSFHEG00000009794	-	99	76.333	ENSONIG00000006007	scrt1b	99	76.333	Oreochromis_niloticus
ENSFHEG00000009794	-	97	60.815	ENSONIG00000016758	scrt2	97	60.815	Oreochromis_niloticus
ENSFHEG00000009794	-	97	60.188	ENSORLG00000024051	scrt2	97	60.188	Oryzias_latipes
ENSFHEG00000009794	-	99	75.251	ENSORLG00000025651	scrt1b	99	76.000	Oryzias_latipes
ENSFHEG00000009794	-	100	90.099	ENSORLG00000022825	-	100	90.099	Oryzias_latipes
ENSFHEG00000009794	-	97	60.188	ENSORLG00020011478	scrt2	97	60.188	Oryzias_latipes_hni
ENSFHEG00000009794	-	99	75.251	ENSORLG00020012967	scrt1b	99	76.000	Oryzias_latipes_hni
ENSFHEG00000009794	-	100	89.769	ENSORLG00015010104	-	100	89.769	Oryzias_latipes_hsok
ENSFHEG00000009794	-	97	60.188	ENSORLG00015005524	scrt2	97	60.188	Oryzias_latipes_hsok
ENSFHEG00000009794	-	99	75.251	ENSORLG00015019165	scrt1b	99	76.000	Oryzias_latipes_hsok
ENSFHEG00000009794	-	97	60.502	ENSOMEG00000002661	scrt2	97	60.502	Oryzias_melastigma
ENSFHEG00000009794	-	100	91.639	ENSOMEG00000000286	-	100	91.639	Oryzias_melastigma
ENSFHEG00000009794	-	99	75.251	ENSOMEG00000003925	scrt1b	99	76.000	Oryzias_melastigma
ENSFHEG00000009794	-	99	78.188	ENSPKIG00000020085	scrt1a	99	78.188	Paramormyrops_kingsleyae
ENSFHEG00000009794	-	99	77.181	ENSPKIG00000022303	SCRT1	99	77.181	Paramormyrops_kingsleyae
ENSFHEG00000009794	-	100	89.298	ENSPMGG00000021402	-	100	89.298	Periophthalmus_magnuspinnatus
ENSFHEG00000009794	-	99	73.244	ENSPMGG00000002260	scrt1b	99	73.244	Periophthalmus_magnuspinnatus
ENSFHEG00000009794	-	97	65.068	ENSPMGG00000016561	scrt2	96	65.068	Periophthalmus_magnuspinnatus
ENSFHEG00000009794	-	99	76.667	ENSPFOG00000017719	scrt1b	99	76.667	Poecilia_formosa
ENSFHEG00000009794	-	97	59.875	ENSPFOG00000007738	scrt2	97	59.875	Poecilia_formosa
ENSFHEG00000009794	-	100	96.321	ENSPFOG00000005616	-	100	96.321	Poecilia_formosa
ENSFHEG00000009794	-	99	76.667	ENSPLAG00000009876	scrt1b	99	76.667	Poecilia_latipinna
ENSFHEG00000009794	-	100	96.321	ENSPLAG00000011718	-	100	96.321	Poecilia_latipinna
ENSFHEG00000009794	-	97	64.828	ENSPLAG00000005765	scrt2	96	64.828	Poecilia_latipinna
ENSFHEG00000009794	-	100	96.321	ENSPMEG00000011706	-	100	96.321	Poecilia_mexicana
ENSFHEG00000009794	-	99	76.667	ENSPMEG00000013274	scrt1b	99	76.667	Poecilia_mexicana
ENSFHEG00000009794	-	97	64.828	ENSPMEG00000001538	scrt2	96	64.828	Poecilia_mexicana
ENSFHEG00000009794	-	100	95.652	ENSPREG00000012166	-	100	95.652	Poecilia_reticulata
ENSFHEG00000009794	-	99	76.667	ENSPREG00000018985	scrt1b	99	76.667	Poecilia_reticulata
ENSFHEG00000009794	-	97	59.875	ENSPREG00000001147	scrt2	97	59.875	Poecilia_reticulata
ENSFHEG00000009794	-	100	93.645	ENSPNYG00000008865	-	100	93.645	Pundamilia_nyererei
ENSFHEG00000009794	-	97	63.793	ENSPNYG00000013109	scrt2	96	63.793	Pundamilia_nyererei
ENSFHEG00000009794	-	99	76.667	ENSPNYG00000017733	scrt1b	99	76.667	Pundamilia_nyererei
ENSFHEG00000009794	-	98	73.649	ENSPNAG00000027880	-	99	73.986	Pygocentrus_nattereri
ENSFHEG00000009794	-	99	78.188	ENSPNAG00000017415	scrt1a	99	78.188	Pygocentrus_nattereri
ENSFHEG00000009794	-	99	76.510	ENSSFOG00015001195	SCRT1	99	76.510	Scleropages_formosus
ENSFHEG00000009794	-	100	75.748	ENSSMAG00000019207	scrt1b	100	75.748	Scophthalmus_maximus
ENSFHEG00000009794	-	100	91.089	ENSSMAG00000005122	-	100	91.089	Scophthalmus_maximus
ENSFHEG00000009794	-	99	77.000	ENSSDUG00000007752	scrt1b	99	77.000	Seriola_dumerili
ENSFHEG00000009794	-	100	95.652	ENSSDUG00000013215	-	100	95.652	Seriola_dumerili
ENSFHEG00000009794	-	100	59.877	ENSSDUG00000001637	scrt2	98	59.877	Seriola_dumerili
ENSFHEG00000009794	-	97	60.312	ENSSLDG00000013565	scrt2	97	59.688	Seriola_lalandi_dorsalis
ENSFHEG00000009794	-	99	77.000	ENSSLDG00000017166	scrt1b	99	77.000	Seriola_lalandi_dorsalis
ENSFHEG00000009794	-	100	95.652	ENSSLDG00000016454	-	100	95.652	Seriola_lalandi_dorsalis
ENSFHEG00000009794	-	97	62.414	ENSSPUG00000018637	SCRT2	97	62.414	Sphenodon_punctatus
ENSFHEG00000009794	-	97	64.138	ENSSPAG00000014018	scrt2	96	64.138	Stegastes_partitus
ENSFHEG00000009794	-	99	77.000	ENSSPAG00000002200	scrt1b	99	77.000	Stegastes_partitus
ENSFHEG00000009794	-	100	95.652	ENSSPAG00000006788	-	100	95.652	Stegastes_partitus
ENSFHEG00000009794	-	67	77.889	ENSTGUG00000006801	SCRT2	86	78.392	Taeniopygia_guttata
ENSFHEG00000009794	-	98	76.768	ENSTRUG00000011637	scrt1b	99	76.768	Takifugu_rubripes
ENSFHEG00000009794	-	100	90.970	ENSTRUG00000012719	-	100	91.639	Takifugu_rubripes
ENSFHEG00000009794	-	97	60.510	ENSTRUG00000007620	scrt2	97	60.510	Takifugu_rubripes
ENSFHEG00000009794	-	86	83.333	ENSTRUG00000019558	-	82	84.109	Takifugu_rubripes
ENSFHEG00000009794	-	99	76.000	ENSTNIG00000018384	scrt1b	99	76.000	Tetraodon_nigroviridis
ENSFHEG00000009794	-	97	64.626	ENSTNIG00000012473	scrt2	97	64.626	Tetraodon_nigroviridis
ENSFHEG00000009794	-	99	77.000	ENSXCOG00000019675	scrt1b	99	77.000	Xiphophorus_couchianus
ENSFHEG00000009794	-	97	61.812	ENSXCOG00000014367	scrt2	97	61.812	Xiphophorus_couchianus
ENSFHEG00000009794	-	100	86.288	ENSXCOG00000019861	-	100	86.288	Xiphophorus_couchianus
ENSFHEG00000009794	-	100	95.652	ENSXMAG00000015353	-	100	95.652	Xiphophorus_maculatus
ENSFHEG00000009794	-	97	59.502	ENSXMAG00000028567	scrt2	97	59.502	Xiphophorus_maculatus
ENSFHEG00000009794	-	99	77.000	ENSXMAG00000027885	scrt1b	99	77.000	Xiphophorus_maculatus