EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000009824 (Gene tree)
Gene ID: -
Gene Symbol: rad54l
Alias: zgc:56289
Full Name: DNA repair and recombination protein RAD54-like
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 26917 bases
Position: chrKN806782.1:7266-34182
Accession: 105922669
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000008439	ResIII	PF04851.15	1.9e-08	1	1
ENSFHEP00000008448	ResIII	PF04851.15	4.4e-08	1	1
ENSFHEP00000026668	ResIII	PF04851.15	4.5e-08	1	1
ENSFHEP00000008439	DEAD	PF00270.29	1.6e-06	1	1
ENSFHEP00000026668	DEAD	PF00270.29	1.6e-06	1	1
ENSFHEP00000008448	DEAD	PF00270.29	1.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000002120	-	1743	-	ENSFHEP00000008448	580 (aa)	-	-
ENSFHET00000002132	-	1749	XM_021314204	ENSFHEP00000026668	582 (aa)	XP_021169879	-
ENSFHET00000002138	-	1779	-	ENSFHEP00000008439	592 (aa)	-	-

Gene Model

Click here to download ENSFHEG00000009824's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000009824's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000009824	rad54l	58	30.857	ENSFHEG00000007269	-	51	30.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000009824	rad54l	78	77.802	ENSG00000085999	RAD54L	100	82.667	Homo_sapiens
ENSFHEG00000009824	rad54l	83	83.160	ENSAPOG00000011643	rad54l	67	83.160	Acanthochromis_polyacanthus
ENSFHEG00000009824	rad54l	78	77.093	ENSAMEG00000013902	RAD54L	61	77.093	Ailuropoda_melanoleuca
ENSFHEG00000009824	rad54l	83	78.411	ENSACIG00000001939	rad54l	66	78.411	Amphilophus_citrinellus
ENSFHEG00000009824	rad54l	80	85.961	ENSAOCG00000017576	rad54l	63	85.961	Amphiprion_ocellaris
ENSFHEG00000009824	rad54l	80	85.837	ENSAPEG00000020658	rad54l	63	86.947	Amphiprion_percula
ENSFHEG00000009824	rad54l	78	86.813	ENSATEG00000006767	rad54l	65	86.813	Anabas_testudineus
ENSFHEG00000009824	rad54l	78	79.691	ENSAPLG00000006389	RAD54L	65	79.691	Anas_platyrhynchos
ENSFHEG00000009824	rad54l	78	80.396	ENSACAG00000002312	RAD54L	61	80.710	Anolis_carolinensis
ENSFHEG00000009824	rad54l	78	77.582	ENSANAG00000035439	RAD54L	61	77.582	Aotus_nancymaae
ENSFHEG00000009824	rad54l	80	81.897	ENSACLG00000018711	rad54l	63	81.897	Astatotilapia_calliptera
ENSFHEG00000009824	rad54l	83	80.417	ENSAMXG00000012777	rad54l	65	80.417	Astyanax_mexicanus
ENSFHEG00000009824	rad54l	78	78.414	ENSBTAG00000019901	RAD54L	61	78.414	Bos_taurus
ENSFHEG00000009824	rad54l	74	55.116	WBGene00004298	rad-54	53	54.734	Caenorhabditis_elegans
ENSFHEG00000009824	rad54l	78	77.363	ENSCJAG00000021080	RAD54L	63	77.363	Callithrix_jacchus
ENSFHEG00000009824	rad54l	78	77.313	ENSCAFG00000004272	RAD54L	61	77.313	Canis_familiaris
ENSFHEG00000009824	rad54l	78	77.313	ENSCAFG00020015066	RAD54L	61	77.313	Canis_lupus_dingo
ENSFHEG00000009824	rad54l	78	78.194	ENSCHIG00000020118	RAD54L	61	78.194	Capra_hircus
ENSFHEG00000009824	rad54l	78	77.582	ENSTSYG00000002032	RAD54L	66	72.636	Carlito_syrichta
ENSFHEG00000009824	rad54l	78	77.582	ENSCPOG00000006768	RAD54L	61	77.582	Cavia_porcellus
ENSFHEG00000009824	rad54l	78	78.022	ENSCCAG00000025783	RAD54L	61	78.022	Cebus_capucinus
ENSFHEG00000009824	rad54l	78	77.363	ENSCATG00000030589	RAD54L	61	77.363	Cercocebus_atys
ENSFHEG00000009824	rad54l	78	77.582	ENSCLAG00000004645	RAD54L	61	77.582	Chinchilla_lanigera
ENSFHEG00000009824	rad54l	78	77.363	ENSCSAG00000001229	RAD54L	61	77.363	Chlorocebus_sabaeus
ENSFHEG00000009824	rad54l	78	78.808	ENSCPBG00000005675	RAD54L	61	78.936	Chrysemys_picta_bellii
ENSFHEG00000009824	rad54l	83	57.282	ENSCING00000024456	-	67	57.282	Ciona_intestinalis
ENSFHEG00000009824	rad54l	78	60.722	ENSCSAVG00000010859	-	61	60.722	Ciona_savignyi
ENSFHEG00000009824	rad54l	78	77.363	ENSCANG00000034891	RAD54L	61	77.363	Colobus_angolensis_palliatus
ENSFHEG00000009824	rad54l	82	72.822	ENSCGRG00001014807	Rad54l	61	76.889	Cricetulus_griseus_chok1gshd
ENSFHEG00000009824	rad54l	77	76.889	ENSCGRG00000016038	Rad54l	60	76.889	Cricetulus_griseus_crigri
ENSFHEG00000009824	rad54l	74	87.850	ENSCSEG00000001983	rad54l	59	87.850	Cynoglossus_semilaevis
ENSFHEG00000009824	rad54l	88	60.769	ENSCVAG00000019561	rad54l	90	60.769	Cyprinodon_variegatus
ENSFHEG00000009824	rad54l	83	77.959	ENSDARG00000018623	rad54l	66	77.959	Danio_rerio
ENSFHEG00000009824	rad54l	78	77.483	ENSDNOG00000003395	RAD54L	61	77.483	Dasypus_novemcinctus
ENSFHEG00000009824	rad54l	76	67.785	ENSDORG00000002632	Rad54l	59	68.009	Dipodomys_ordii
ENSFHEG00000009824	rad54l	82	49.281	FBgn0002989	okr	61	49.281	Drosophila_melanogaster
ENSFHEG00000009824	rad54l	70	78.293	ENSETEG00000000550	RAD54L	55	78.293	Echinops_telfairi
ENSFHEG00000009824	rad54l	78	77.263	ENSEASG00005004511	RAD54L	62	78.132	Equus_asinus_asinus
ENSFHEG00000009824	rad54l	77	78.000	ENSECAG00000008760	RAD54L	66	77.876	Equus_caballus
ENSFHEG00000009824	rad54l	74	79.859	ENSEEUG00000008113	RAD54L	57	79.859	Erinaceus_europaeus
ENSFHEG00000009824	rad54l	83	79.477	ENSELUG00000002295	rad54l	67	79.477	Esox_lucius
ENSFHEG00000009824	rad54l	78	76.872	ENSFCAG00000003444	RAD54L	61	76.872	Felis_catus
ENSFHEG00000009824	rad54l	82	75.884	ENSFALG00000009480	RAD54L	61	78.936	Ficedula_albicollis
ENSFHEG00000009824	rad54l	78	76.703	ENSFDAG00000007806	RAD54L	61	76.703	Fukomys_damarensis
ENSFHEG00000009824	rad54l	83	77.869	ENSGMOG00000014568	rad54l	66	77.869	Gadus_morhua
ENSFHEG00000009824	rad54l	78	79.470	ENSGALG00000010356	RAD54L	56	79.823	Gallus_gallus
ENSFHEG00000009824	rad54l	82	86.694	ENSGAFG00000011110	rad54l	71	86.694	Gambusia_affinis
ENSFHEG00000009824	rad54l	83	81.535	ENSGACG00000003111	rad54l	60	85.210	Gasterosteus_aculeatus
ENSFHEG00000009824	rad54l	78	78.146	ENSGAGG00000014089	RAD54L	59	78.146	Gopherus_agassizii
ENSFHEG00000009824	rad54l	78	77.582	ENSGGOG00000010602	RAD54L	61	77.582	Gorilla_gorilla
ENSFHEG00000009824	rad54l	80	82.112	ENSHBUG00000007793	rad54l	63	82.112	Haplochromis_burtoni
ENSFHEG00000009824	rad54l	78	77.582	ENSHGLG00000000753	RAD54L	61	77.582	Heterocephalus_glaber_female
ENSFHEG00000009824	rad54l	78	77.582	ENSHGLG00100016987	RAD54L	61	77.582	Heterocephalus_glaber_male
ENSFHEG00000009824	rad54l	79	82.174	ENSIPUG00000015999	rad54l	65	83.111	Ictalurus_punctatus
ENSFHEG00000009824	rad54l	78	77.143	ENSSTOG00000029125	RAD54L	61	77.143	Ictidomys_tridecemlineatus
ENSFHEG00000009824	rad54l	78	69.231	ENSJJAG00000000235	-	64	70.000	Jaculus_jaculus
ENSFHEG00000009824	rad54l	83	82.573	ENSKMAG00000009944	rad54l	61	87.822	Kryptolebias_marmoratus
ENSFHEG00000009824	rad54l	83	81.497	ENSLBEG00000014617	rad54l	62	86.682	Labrus_bergylta
ENSFHEG00000009824	rad54l	83	80.412	ENSLOCG00000004144	rad54l	72	80.412	Lepisosteus_oculatus
ENSFHEG00000009824	rad54l	77	78.000	ENSLAFG00000007583	RAD54L	61	78.000	Loxodonta_africana
ENSFHEG00000009824	rad54l	78	77.363	ENSMFAG00000031241	RAD54L	61	77.363	Macaca_fascicularis
ENSFHEG00000009824	rad54l	78	77.363	ENSMMUG00000011568	RAD54L	61	77.363	Macaca_mulatta
ENSFHEG00000009824	rad54l	78	77.363	ENSMNEG00000038562	RAD54L	61	77.363	Macaca_nemestrina
ENSFHEG00000009824	rad54l	78	77.363	ENSMLEG00000038145	RAD54L	61	77.363	Mandrillus_leucophaeus
ENSFHEG00000009824	rad54l	83	80.785	ENSMAMG00000022180	rad54l	64	85.219	Mastacembelus_armatus
ENSFHEG00000009824	rad54l	80	81.897	ENSMZEG00005018081	rad54l	63	81.897	Maylandia_zebra
ENSFHEG00000009824	rad54l	78	79.470	ENSMGAG00000010634	RAD54L	61	79.823	Meleagris_gallopavo
ENSFHEG00000009824	rad54l	77	78.000	ENSMAUG00000020076	Rad54l	60	78.000	Mesocricetus_auratus
ENSFHEG00000009824	rad54l	78	77.363	ENSMICG00000003266	RAD54L	61	77.363	Microcebus_murinus
ENSFHEG00000009824	rad54l	77	78.000	ENSMOCG00000001778	Rad54l	60	78.000	Microtus_ochrogaster
ENSFHEG00000009824	rad54l	83	77.273	ENSMALG00000021148	rad54l	64	77.273	Monopterus_albus
ENSFHEG00000009824	rad54l	78	71.610	MGP_CAROLIEiJ_G0026325	Rad54l	62	71.610	Mus_caroli
ENSFHEG00000009824	rad54l	78	76.703	ENSMUSG00000028702	Rad54l	61	76.703	Mus_musculus
ENSFHEG00000009824	rad54l	77	77.333	MGP_PahariEiJ_G0028657	Rad54l	60	77.333	Mus_pahari
ENSFHEG00000009824	rad54l	78	76.703	MGP_SPRETEiJ_G0027297	Rad54l	61	76.703	Mus_spretus
ENSFHEG00000009824	rad54l	78	76.703	ENSMPUG00000012883	RAD54L	61	76.703	Mustela_putorius_furo
ENSFHEG00000009824	rad54l	77	78.444	ENSMLUG00000003763	RAD54L	60	78.444	Myotis_lucifugus
ENSFHEG00000009824	rad54l	78	76.703	ENSNGAG00000024213	Rad54l	61	76.703	Nannospalax_galili
ENSFHEG00000009824	rad54l	78	77.582	ENSNLEG00000016548	RAD54L	61	77.582	Nomascus_leucogenys
ENSFHEG00000009824	rad54l	74	72.365	ENSMEUG00000006793	RAD54L	63	72.365	Notamacropus_eugenii
ENSFHEG00000009824	rad54l	68	81.579	ENSOPRG00000016016	RAD54L	54	81.579	Ochotona_princeps
ENSFHEG00000009824	rad54l	80	76.940	ENSODEG00000008519	RAD54L	62	76.940	Octodon_degus
ENSFHEG00000009824	rad54l	80	82.112	ENSONIG00000007659	rad54l	63	82.112	Oreochromis_niloticus
ENSFHEG00000009824	rad54l	80	76.293	ENSOCUG00000005229	RAD54L	62	76.293	Oryctolagus_cuniculus
ENSFHEG00000009824	rad54l	76	83.937	ENSORLG00000002958	rad54l	61	83.669	Oryzias_latipes
ENSFHEG00000009824	rad54l	83	79.210	ENSORLG00020006554	rad54l	64	84.562	Oryzias_latipes_hni
ENSFHEG00000009824	rad54l	76	84.163	ENSORLG00015002907	rad54l	61	84.116	Oryzias_latipes_hsok
ENSFHEG00000009824	rad54l	83	79.834	ENSOMEG00000007770	rad54l	61	84.494	Oryzias_melastigma
ENSFHEG00000009824	rad54l	78	78.462	ENSOARG00000002264	RAD54L	61	78.462	Ovis_aries
ENSFHEG00000009824	rad54l	78	77.582	ENSPPAG00000031222	RAD54L	61	77.582	Pan_paniscus
ENSFHEG00000009824	rad54l	78	76.872	ENSPPRG00000010317	RAD54L	61	76.872	Panthera_pardus
ENSFHEG00000009824	rad54l	78	76.872	ENSPTIG00000012200	RAD54L	61	76.872	Panthera_tigris_altaica
ENSFHEG00000009824	rad54l	78	77.363	ENSPTRG00000000689	RAD54L	61	77.363	Pan_troglodytes
ENSFHEG00000009824	rad54l	78	77.363	ENSPANG00000016295	RAD54L	64	77.778	Papio_anubis
ENSFHEG00000009824	rad54l	80	75.862	ENSPKIG00000016172	rad54l	62	75.862	Paramormyrops_kingsleyae
ENSFHEG00000009824	rad54l	78	79.691	ENSPSIG00000003258	RAD54L	62	79.691	Pelodiscus_sinensis
ENSFHEG00000009824	rad54l	81	74.947	ENSPMGG00000016335	rad54l	65	74.947	Periophthalmus_magnuspinnatus
ENSFHEG00000009824	rad54l	82	73.651	ENSPEMG00000011422	Rad54l	65	73.651	Peromyscus_maniculatus_bairdii
ENSFHEG00000009824	rad54l	78	73.742	ENSPMAG00000007719	rad54l	61	73.846	Petromyzon_marinus
ENSFHEG00000009824	rad54l	83	73.608	ENSPCIG00000029032	RAD54L	65	73.608	Phascolarctos_cinereus
ENSFHEG00000009824	rad54l	78	90.330	ENSPFOG00000013732	rad54l	72	90.330	Poecilia_formosa
ENSFHEG00000009824	rad54l	74	87.671	ENSPLAG00000023416	rad54l	72	87.671	Poecilia_latipinna
ENSFHEG00000009824	rad54l	82	87.526	ENSPMEG00000008299	rad54l	71	87.526	Poecilia_mexicana
ENSFHEG00000009824	rad54l	82	87.110	ENSPREG00000019955	rad54l	65	87.110	Poecilia_reticulata
ENSFHEG00000009824	rad54l	78	77.802	ENSPPYG00000001398	RAD54L	67	77.802	Pongo_abelii
ENSFHEG00000009824	rad54l	78	76.923	ENSPCOG00000015423	RAD54L	61	76.923	Propithecus_coquereli
ENSFHEG00000009824	rad54l	74	81.963	ENSPNYG00000002942	rad54l	61	81.963	Pundamilia_nyererei
ENSFHEG00000009824	rad54l	78	83.700	ENSPNAG00000012483	rad54l	61	83.700	Pygocentrus_nattereri
ENSFHEG00000009824	rad54l	78	76.652	ENSRNOG00000013148	Rad54l	61	76.652	Rattus_norvegicus
ENSFHEG00000009824	rad54l	78	77.363	ENSRBIG00000043495	RAD54L	61	77.363	Rhinopithecus_bieti
ENSFHEG00000009824	rad54l	78	77.363	ENSRROG00000020844	RAD54L	61	77.363	Rhinopithecus_roxellana
ENSFHEG00000009824	rad54l	78	77.802	ENSSBOG00000024672	RAD54L	61	77.802	Saimiri_boliviensis_boliviensis
ENSFHEG00000009824	rad54l	82	73.542	ENSSHAG00000000110	RAD54L	61	76.991	Sarcophilus_harrisii
ENSFHEG00000009824	rad54l	83	82.952	ENSSDUG00000019147	rad54l	65	82.952	Seriola_dumerili
ENSFHEG00000009824	rad54l	83	82.328	ENSSLDG00000012330	rad54l	61	86.946	Seriola_lalandi_dorsalis
ENSFHEG00000009824	rad54l	74	80.328	ENSSARG00000006689	RAD54L	69	80.328	Sorex_araneus
ENSFHEG00000009824	rad54l	81	84.009	ENSSPAG00000011016	rad54l	63	84.009	Stegastes_partitus
ENSFHEG00000009824	rad54l	82	74.274	ENSSSCG00000003905	RAD54L	65	74.274	Sus_scrofa
ENSFHEG00000009824	rad54l	78	79.029	ENSTGUG00000008233	RAD54L	61	79.157	Taeniopygia_guttata
ENSFHEG00000009824	rad54l	74	84.382	ENSTRUG00000008410	rad54l	61	84.382	Takifugu_rubripes
ENSFHEG00000009824	rad54l	81	77.331	ENSTNIG00000004716	rad54l	64	77.590	Tetraodon_nigroviridis
ENSFHEG00000009824	rad54l	74	74.707	ENSTTRG00000006315	RAD54L	57	74.707	Tursiops_truncatus
ENSFHEG00000009824	rad54l	78	76.872	ENSUAMG00000011824	RAD54L	61	76.872	Ursus_americanus
ENSFHEG00000009824	rad54l	78	76.872	ENSUMAG00000023603	RAD54L	61	77.333	Ursus_maritimus
ENSFHEG00000009824	rad54l	78	77.313	ENSVVUG00000007201	RAD54L	61	77.313	Vulpes_vulpes
ENSFHEG00000009824	rad54l	80	68.026	ENSXETG00000004369	rad54l	65	68.026	Xenopus_tropicalis
ENSFHEG00000009824	rad54l	68	88.161	ENSXCOG00000016028	rad54l	83	90.741	Xiphophorus_couchianus