EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000009826 (Gene tree)
Gene ID: 105937134
Gene Symbol: UPF2
Alias: DKFZP434D222|KIAA1408|RENT2|smg-3
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 25311 bases
Position: chrKN811500.1:311601-336911
Accession: 105937134
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000026794	Upf2	PF04050.14	1.2e-32	1	1
ENSFHEP00000026778	Upf2	PF04050.14	1.3e-32	1	1
ENSFHEP00000026778	MIF4G	PF02854.19	2.2e-75	1	3
ENSFHEP00000026778	MIF4G	PF02854.19	2.2e-75	2	3
ENSFHEP00000026778	MIF4G	PF02854.19	2.2e-75	3	3
ENSFHEP00000026794	MIF4G	PF02854.19	2.5e-75	1	3
ENSFHEP00000026794	MIF4G	PF02854.19	2.5e-75	2	3
ENSFHEP00000026794	MIF4G	PF02854.19	2.5e-75	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000001820	UPF2-201	6970	XM_012878288	ENSFHEP00000026794	1296 (aa)	XP_012733742	UPI000644D81E
ENSFHET00000001841	UPF2-202	6218	-	ENSFHEP00000026778	1264 (aa)	-	A0A146ZQE1

Gene Model

Click here to download ENSFHEG00000009826's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000009826's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000009826	UPF2	100	82.154	ENSG00000151461	UPF2	99	82.261	Homo_sapiens
ENSFHEG00000009826	UPF2	99	88.924	ENSAPOG00000015837	UPF2	99	88.565	Acanthochromis_polyacanthus
ENSFHEG00000009826	UPF2	99	83.135	ENSAMEG00000004586	UPF2	99	83.597	Ailuropoda_melanoleuca
ENSFHEG00000009826	UPF2	99	93.997	ENSACIG00000018078	UPF2	99	94.392	Amphilophus_citrinellus
ENSFHEG00000009826	UPF2	100	94.945	ENSAOCG00000016766	UPF2	99	94.945	Amphiprion_ocellaris
ENSFHEG00000009826	UPF2	100	95.024	ENSAPEG00000019084	UPF2	99	95.024	Amphiprion_percula
ENSFHEG00000009826	UPF2	100	94.085	ENSATEG00000021677	UPF2	99	94.479	Anabas_testudineus
ENSFHEG00000009826	UPF2	100	78.824	ENSAPLG00000010287	UPF2	90	83.004	Anas_platyrhynchos
ENSFHEG00000009826	UPF2	99	83.004	ENSACAG00000009259	UPF2	99	83.465	Anolis_carolinensis
ENSFHEG00000009826	UPF2	92	78.866	ENSANAG00000028451	UPF2	94	79.131	Aotus_nancymaae
ENSFHEG00000009826	UPF2	100	94.006	ENSACLG00000012696	UPF2	99	94.401	Astatotilapia_calliptera
ENSFHEG00000009826	UPF2	99	88.337	ENSAMXG00000013700	UPF2	98	88.180	Astyanax_mexicanus
ENSFHEG00000009826	UPF2	99	83.083	ENSBTAG00000000288	UPF2	99	83.425	Bos_taurus
ENSFHEG00000009826	UPF2	99	82.488	ENSCJAG00000020685	UPF2	99	81.962	Callithrix_jacchus
ENSFHEG00000009826	UPF2	99	83.373	ENSCAFG00000004839	UPF2	99	83.715	Canis_familiaris
ENSFHEG00000009826	UPF2	94	86.364	ENSCAFG00020005882	UPF2	99	81.602	Canis_lupus_dingo
ENSFHEG00000009826	UPF2	99	83.135	ENSCHIG00000020359	UPF2	99	83.478	Capra_hircus
ENSFHEG00000009826	UPF2	100	82.376	ENSTSYG00000000935	UPF2	99	82.639	Carlito_syrichta
ENSFHEG00000009826	UPF2	92	74.251	ENSCAPG00000016658	UPF2	95	74.235	Cavia_aperea
ENSFHEG00000009826	UPF2	99	79.762	ENSCPOG00000008809	UPF2	99	80.190	Cavia_porcellus
ENSFHEG00000009826	UPF2	100	75.767	ENSCCAG00000035991	UPF2	99	75.334	Cebus_capucinus
ENSFHEG00000009826	UPF2	100	82.311	ENSCATG00000032679	UPF2	99	82.418	Cercocebus_atys
ENSFHEG00000009826	UPF2	99	81.696	ENSCLAG00000011434	UPF2	99	82.041	Chinchilla_lanigera
ENSFHEG00000009826	UPF2	100	82.311	ENSCSAG00000013372	UPF2	99	82.418	Chlorocebus_sabaeus
ENSFHEG00000009826	UPF2	79	89.333	ENSCHOG00000000422	UPF2	84	89.333	Choloepus_hoffmanni
ENSFHEG00000009826	UPF2	99	80.888	ENSCPBG00000027823	UPF2	99	81.235	Chrysemys_picta_bellii
ENSFHEG00000009826	UPF2	79	49.263	ENSCSAVG00000007772	-	99	48.035	Ciona_savignyi
ENSFHEG00000009826	UPF2	99	77.109	ENSCANG00000040396	UPF2	99	77.577	Colobus_angolensis_palliatus
ENSFHEG00000009826	UPF2	99	82.488	ENSCGRG00001019347	Upf2	99	82.805	Cricetulus_griseus_chok1gshd
ENSFHEG00000009826	UPF2	99	82.488	ENSCGRG00000017993	Upf2	99	82.805	Cricetulus_griseus_crigri
ENSFHEG00000009826	UPF2	100	85.692	ENSCSEG00000003520	UPF2	99	85.185	Cynoglossus_semilaevis
ENSFHEG00000009826	UPF2	100	97.235	ENSCVAG00000006167	UPF2	100	97.235	Cyprinodon_variegatus
ENSFHEG00000009826	UPF2	99	82.977	ENSDNOG00000018160	UPF2	99	83.399	Dasypus_novemcinctus
ENSFHEG00000009826	UPF2	99	82.502	ENSDORG00000002478	Upf2	99	82.688	Dipodomys_ordii
ENSFHEG00000009826	UPF2	90	36.163	FBgn0029992	Upf2	73	39.384	Drosophila_melanogaster
ENSFHEG00000009826	UPF2	72	94.118	ENSETEG00000011583	-	62	94.118	Echinops_telfairi
ENSFHEG00000009826	UPF2	65	71.523	ENSEBUG00000012448	-	93	69.012	Eptatretus_burgeri
ENSFHEG00000009826	UPF2	99	82.171	ENSEASG00005019274	UPF2	99	82.325	Equus_asinus_asinus
ENSFHEG00000009826	UPF2	99	82.171	ENSECAG00000017022	UPF2	99	82.647	Equus_caballus
ENSFHEG00000009826	UPF2	81	73.585	ENSEEUG00000007819	UPF2	70	84.500	Erinaceus_europaeus
ENSFHEG00000009826	UPF2	99	87.569	ENSELUG00000012014	UPF2	99	89.230	Esox_lucius
ENSFHEG00000009826	UPF2	99	84.153	ENSFCAG00000005785	UPF2	99	83.478	Felis_catus
ENSFHEG00000009826	UPF2	99	83.848	ENSFALG00000001889	UPF2	97	84.032	Ficedula_albicollis
ENSFHEG00000009826	UPF2	100	80.866	ENSFDAG00000014348	UPF2	99	81.181	Fukomys_damarensis
ENSFHEG00000009826	UPF2	91	88.179	ENSGMOG00000005557	UPF2	99	86.185	Gadus_morhua
ENSFHEG00000009826	UPF2	100	83.412	ENSGALG00000033772	UPF2	99	83.451	Gallus_gallus
ENSFHEG00000009826	UPF2	100	95.731	ENSGAFG00000020867	UPF2	99	96.126	Gambusia_affinis
ENSFHEG00000009826	UPF2	99	90.701	ENSGACG00000001080	UPF2	99	90.859	Gasterosteus_aculeatus
ENSFHEG00000009826	UPF2	92	84.919	ENSGAGG00000002700	UPF2	92	84.915	Gopherus_agassizii
ENSFHEG00000009826	UPF2	100	82.154	ENSGGOG00000001479	UPF2	99	82.261	Gorilla_gorilla
ENSFHEG00000009826	UPF2	100	93.849	ENSHBUG00000004249	UPF2	99	94.392	Haplochromis_burtoni
ENSFHEG00000009826	UPF2	99	72.857	ENSHGLG00000003822	-	98	73.254	Heterocephalus_glaber_female
ENSFHEG00000009826	UPF2	99	81.458	ENSHGLG00000015176	-	99	81.804	Heterocephalus_glaber_female
ENSFHEG00000009826	UPF2	99	77.919	ENSHGLG00100010036	UPF2	99	79.587	Heterocephalus_glaber_male
ENSFHEG00000009826	UPF2	100	89.851	ENSHCOG00000004025	UPF2	99	89.606	Hippocampus_comes
ENSFHEG00000009826	UPF2	99	86.693	ENSIPUG00000015524	UPF2	99	86.614	Ictalurus_punctatus
ENSFHEG00000009826	UPF2	99	82.660	ENSSTOG00000013075	UPF2	99	82.925	Ictidomys_tridecemlineatus
ENSFHEG00000009826	UPF2	100	79.213	ENSJJAG00000004913	Upf2	99	81.775	Jaculus_jaculus
ENSFHEG00000009826	UPF2	100	93.533	ENSKMAG00000001071	UPF2	100	93.612	Kryptolebias_marmoratus
ENSFHEG00000009826	UPF2	80	89.515	ENSLBEG00000000728	-	93	89.951	Labrus_bergylta
ENSFHEG00000009826	UPF2	100	92.271	ENSLBEG00000016394	-	98	93.060	Labrus_bergylta
ENSFHEG00000009826	UPF2	98	77.247	ENSLACG00000015945	UPF2	99	76.507	Latimeria_chalumnae
ENSFHEG00000009826	UPF2	100	87.549	ENSLOCG00000015698	UPF2	100	87.234	Lepisosteus_oculatus
ENSFHEG00000009826	UPF2	100	82.311	ENSMFAG00000043865	UPF2	99	82.418	Macaca_fascicularis
ENSFHEG00000009826	UPF2	100	82.311	ENSMMUG00000008241	UPF2	99	82.418	Macaca_mulatta
ENSFHEG00000009826	UPF2	80	83.153	ENSMNEG00000008062	UPF2	99	82.759	Macaca_nemestrina
ENSFHEG00000009826	UPF2	99	80.252	ENSMLEG00000036120	UPF2	99	80.315	Mandrillus_leucophaeus
ENSFHEG00000009826	UPF2	100	94.006	ENSMAMG00000018276	UPF2	99	94.479	Mastacembelus_armatus
ENSFHEG00000009826	UPF2	100	94.006	ENSMZEG00005021595	UPF2	99	94.401	Maylandia_zebra
ENSFHEG00000009826	UPF2	99	83.017	ENSMGAG00000004573	UPF2	99	83.136	Meleagris_gallopavo
ENSFHEG00000009826	UPF2	99	80.428	ENSMAUG00000016512	Upf2	99	80.745	Mesocricetus_auratus
ENSFHEG00000009826	UPF2	99	80.807	ENSMICG00000001716	UPF2	99	79.811	Microcebus_murinus
ENSFHEG00000009826	UPF2	100	81.245	ENSMOCG00000008263	Upf2	99	81.481	Microtus_ochrogaster
ENSFHEG00000009826	UPF2	99	88.608	ENSMMOG00000006528	UPF2	99	88.449	Mola_mola
ENSFHEG00000009826	UPF2	99	81.394	ENSMODG00000016794	UPF2	99	83.848	Monodelphis_domestica
ENSFHEG00000009826	UPF2	99	92.642	ENSMALG00000002663	UPF2	99	92.722	Monopterus_albus
ENSFHEG00000009826	UPF2	99	82.250	MGP_CAROLIEiJ_G0023157	Upf2	99	84.522	Mus_caroli
ENSFHEG00000009826	UPF2	99	82.647	ENSMUSG00000043241	Upf2	99	83.774	Mus_musculus
ENSFHEG00000009826	UPF2	100	82.283	MGP_PahariEiJ_G0019217	Upf2	100	83.585	Mus_pahari
ENSFHEG00000009826	UPF2	99	82.805	MGP_SPRETEiJ_G0024075	Upf2	100	83.774	Mus_spretus
ENSFHEG00000009826	UPF2	99	83.056	ENSMPUG00000001064	UPF2	99	83.478	Mustela_putorius_furo
ENSFHEG00000009826	UPF2	99	82.106	ENSMLUG00000000228	UPF2	99	82.595	Myotis_lucifugus
ENSFHEG00000009826	UPF2	100	94.006	ENSNBRG00000013629	UPF2	99	94.401	Neolamprologus_brichardi
ENSFHEG00000009826	UPF2	100	82.233	ENSNLEG00000012058	UPF2	99	82.339	Nomascus_leucogenys
ENSFHEG00000009826	UPF2	73	95.070	ENSOPRG00000006801	-	73	95.070	Ochotona_princeps
ENSFHEG00000009826	UPF2	99	81.423	ENSODEG00000001290	UPF2	99	81.818	Octodon_degus
ENSFHEG00000009826	UPF2	100	93.691	ENSONIG00000017991	UPF2	99	94.085	Oreochromis_niloticus
ENSFHEG00000009826	UPF2	99	80.806	ENSOCUG00000006230	UPF2	99	81.423	Oryctolagus_cuniculus
ENSFHEG00000009826	UPF2	98	92.903	ENSORLG00000017189	UPF2	99	92.101	Oryzias_latipes
ENSFHEG00000009826	UPF2	98	92.909	ENSORLG00020005969	UPF2	99	92.180	Oryzias_latipes_hni
ENSFHEG00000009826	UPF2	98	92.909	ENSORLG00015005713	UPF2	99	92.180	Oryzias_latipes_hsok
ENSFHEG00000009826	UPF2	99	88.440	ENSOMEG00000023420	UPF2	99	87.723	Oryzias_melastigma
ENSFHEG00000009826	UPF2	100	82.769	ENSOGAG00000005796	UPF2	99	82.482	Otolemur_garnettii
ENSFHEG00000009826	UPF2	99	83.004	ENSOARG00000014587	UPF2	99	83.346	Ovis_aries
ENSFHEG00000009826	UPF2	99	79.622	ENSPPAG00000037953	UPF2	99	79.685	Pan_paniscus
ENSFHEG00000009826	UPF2	99	83.056	ENSPPRG00000000690	UPF2	99	83.478	Panthera_pardus
ENSFHEG00000009826	UPF2	99	83.056	ENSPTIG00000008867	UPF2	99	83.478	Panthera_tigris_altaica
ENSFHEG00000009826	UPF2	100	82.154	ENSPTRG00000002291	UPF2	99	82.261	Pan_troglodytes
ENSFHEG00000009826	UPF2	100	82.311	ENSPANG00000023399	UPF2	99	82.418	Papio_anubis
ENSFHEG00000009826	UPF2	100	87.234	ENSPKIG00000025502	UPF2	99	87.234	Paramormyrops_kingsleyae
ENSFHEG00000009826	UPF2	51	86.047	ENSPSIG00000015158	UPF2	83	85.344	Pelodiscus_sinensis
ENSFHEG00000009826	UPF2	99	88.986	ENSPMGG00000005259	UPF2	99	88.986	Periophthalmus_magnuspinnatus
ENSFHEG00000009826	UPF2	92	76.829	ENSPEMG00000015731	Upf2	98	76.829	Peromyscus_maniculatus_bairdii
ENSFHEG00000009826	UPF2	99	83.175	ENSPCIG00000006656	UPF2	99	83.570	Phascolarctos_cinereus
ENSFHEG00000009826	UPF2	100	96.759	ENSPFOG00000017118	UPF2	99	96.759	Poecilia_formosa
ENSFHEG00000009826	UPF2	100	96.838	ENSPLAG00000005094	UPF2	99	96.838	Poecilia_latipinna
ENSFHEG00000009826	UPF2	100	96.838	ENSPMEG00000017009	UPF2	99	96.838	Poecilia_mexicana
ENSFHEG00000009826	UPF2	99	95.487	ENSPREG00000021880	UPF2	99	95.487	Poecilia_reticulata
ENSFHEG00000009826	UPF2	66	84.460	ENSPPYG00000002089	-	100	85.172	Pongo_abelii
ENSFHEG00000009826	UPF2	86	75.182	ENSPCAG00000000684	UPF2	99	70.672	Procavia_capensis
ENSFHEG00000009826	UPF2	99	79.590	ENSPCOG00000021656	UPF2	99	80.205	Propithecus_coquereli
ENSFHEG00000009826	UPF2	99	76.266	ENSPVAG00000017286	UPF2	99	76.661	Pteropus_vampyrus
ENSFHEG00000009826	UPF2	99	91.390	ENSPNYG00000017096	UPF2	99	91.785	Pundamilia_nyererei
ENSFHEG00000009826	UPF2	100	88.749	ENSPNAG00000009357	UPF2	99	88.670	Pygocentrus_nattereri
ENSFHEG00000009826	UPF2	99	78.442	ENSRNOG00000023593	Upf2	100	93.333	Rattus_norvegicus
ENSFHEG00000009826	UPF2	99	81.087	ENSRBIG00000037780	UPF2	99	81.117	Rhinopithecus_bieti
ENSFHEG00000009826	UPF2	100	82.075	ENSRROG00000043547	UPF2	99	82.104	Rhinopithecus_roxellana
ENSFHEG00000009826	UPF2	100	81.983	ENSSBOG00000020012	UPF2	99	81.383	Saimiri_boliviensis_boliviensis
ENSFHEG00000009826	UPF2	99	86.109	ENSSFOG00015023788	upf2	99	85.872	Scleropages_formosus
ENSFHEG00000009826	UPF2	91	91.493	ENSSMAG00000007637	UPF2	99	89.969	Scophthalmus_maximus
ENSFHEG00000009826	UPF2	100	94.866	ENSSDUG00000017244	UPF2	98	94.866	Seriola_dumerili
ENSFHEG00000009826	UPF2	99	91.218	ENSSLDG00000016866	UPF2	99	90.981	Seriola_lalandi_dorsalis
ENSFHEG00000009826	UPF2	100	79.465	ENSSARG00000008615	UPF2	99	81.983	Sorex_araneus
ENSFHEG00000009826	UPF2	98	77.386	ENSSPUG00000014544	UPF2	91	82.373	Sphenodon_punctatus
ENSFHEG00000009826	UPF2	69	84.571	ENSSSCG00000011117	-	99	85.143	Sus_scrofa
ENSFHEG00000009826	UPF2	99	83.651	ENSTGUG00000002163	-	99	83.835	Taeniopygia_guttata
ENSFHEG00000009826	UPF2	100	91.555	ENSTRUG00000007519	UPF2	98	91.871	Takifugu_rubripes
ENSFHEG00000009826	UPF2	100	88.337	ENSTNIG00000004453	UPF2	99	88.416	Tetraodon_nigroviridis
ENSFHEG00000009826	UPF2	93	72.712	ENSTBEG00000012679	UPF2	92	74.661	Tupaia_belangeri
ENSFHEG00000009826	UPF2	99	81.696	ENSTTRG00000016388	UPF2	99	82.041	Tursiops_truncatus
ENSFHEG00000009826	UPF2	86	93.258	ENSUAMG00000023560	UPF2	97	93.258	Ursus_americanus
ENSFHEG00000009826	UPF2	99	83.135	ENSUMAG00000012953	UPF2	94	83.557	Ursus_maritimus
ENSFHEG00000009826	UPF2	82	96.774	ENSVPAG00000006763	UPF2	84	96.774	Vicugna_pacos
ENSFHEG00000009826	UPF2	99	83.294	ENSVVUG00000006166	UPF2	99	83.636	Vulpes_vulpes
ENSFHEG00000009826	UPF2	99	80.445	ENSXETG00000033103	UPF2	91	84.038	Xenopus_tropicalis
ENSFHEG00000009826	UPF2	99	96.437	ENSXCOG00000011604	UPF2	99	96.437	Xiphophorus_couchianus
ENSFHEG00000009826	UPF2	100	96.601	ENSXMAG00000017209	UPF2	99	96.601	Xiphophorus_maculatus