EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000010264 (Gene tree)
Gene ID: 105935508
Gene Symbol: larp1b
Alias: fc76b04|wu:fc76b04
Full Name: la-related protein 1B
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 39546 bases
Position: chrKN811455.1:1293848-1333393
Accession: 105935508
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000009042	La	PF05383.17	7.1e-21	1	1
ENSFHEP00000009065	La	PF05383.17	7.5e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000001132	-	5667	XM_012875939	ENSFHEP00000009065	1121 (aa)	XP_012731393	UPI000644FB17
ENSFHET00000001146	-	5493	XM_021323306	ENSFHEP00000009042	1063 (aa)	XP_021178981	UPI0006448AEB

Gene Model

Click here to download ENSFHEG00000010264's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000010264's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000010264	larp1b	53	47.667	ENSFHEG00000020307	larp1	90	54.734

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000010264	larp1b	84	55.106	ENSG00000138709	LARP1B	97	55.901	Homo_sapiens
ENSFHEG00000010264	larp1b	97	82.785	ENSAPOG00000020101	larp1b	100	82.785	Acanthochromis_polyacanthus
ENSFHEG00000010264	larp1b	51	52.821	ENSAMEG00000002748	LARP1B	99	52.811	Ailuropoda_melanoleuca
ENSFHEG00000010264	larp1b	97	77.085	ENSACIG00000023890	larp1b	100	77.565	Amphilophus_citrinellus
ENSFHEG00000010264	larp1b	87	76.759	ENSAOCG00000014268	larp1b	99	76.759	Amphiprion_ocellaris
ENSFHEG00000010264	larp1b	97	81.442	ENSAPEG00000004126	larp1b	100	81.538	Amphiprion_percula
ENSFHEG00000010264	larp1b	97	79.846	ENSATEG00000017849	larp1b	100	80.058	Anabas_testudineus
ENSFHEG00000010264	larp1b	79	54.095	ENSAPLG00000010129	LARP1B	100	53.846	Anas_platyrhynchos
ENSFHEG00000010264	larp1b	81	55.509	ENSACAG00000011338	LARP1B	95	55.682	Anolis_carolinensis
ENSFHEG00000010264	larp1b	78	47.132	ENSANAG00000034618	LARP1B	94	51.133	Aotus_nancymaae
ENSFHEG00000010264	larp1b	97	78.721	ENSACLG00000011948	larp1b	100	79.178	Astatotilapia_calliptera
ENSFHEG00000010264	larp1b	91	59.384	ENSAMXG00000006805	larp1b	94	60.417	Astyanax_mexicanus
ENSFHEG00000010264	larp1b	84	55.332	ENSBTAG00000012135	LARP1B	95	50.181	Bos_taurus
ENSFHEG00000010264	larp1b	79	56.039	ENSCJAG00000003338	LARP1B	99	56.492	Callithrix_jacchus
ENSFHEG00000010264	larp1b	79	60.140	ENSCAFG00000003831	LARP1B	99	60.140	Canis_familiaris
ENSFHEG00000010264	larp1b	82	56.445	ENSCAFG00020018899	LARP1B	99	56.592	Canis_lupus_dingo
ENSFHEG00000010264	larp1b	82	54.490	ENSCHIG00000023144	LARP1B	99	54.158	Capra_hircus
ENSFHEG00000010264	larp1b	80	56.111	ENSCCAG00000021948	LARP1B	98	55.945	Cebus_capucinus
ENSFHEG00000010264	larp1b	80	55.272	ENSCATG00000013541	LARP1B	98	55.106	Cercocebus_atys
ENSFHEG00000010264	larp1b	80	55.839	ENSCSAG00000003582	LARP1B	98	55.673	Chlorocebus_sabaeus
ENSFHEG00000010264	larp1b	80	52.620	ENSCHOG00000005354	LARP1B	99	52.620	Choloepus_hoffmanni
ENSFHEG00000010264	larp1b	85	56.250	ENSCPBG00000017480	LARP1B	90	56.743	Chrysemys_picta_bellii
ENSFHEG00000010264	larp1b	79	56.614	ENSCANG00000026958	LARP1B	98	56.551	Colobus_angolensis_palliatus
ENSFHEG00000010264	larp1b	97	73.267	ENSCSEG00000013519	larp1b	100	73.807	Cynoglossus_semilaevis
ENSFHEG00000010264	larp1b	97	86.081	ENSCVAG00000005046	larp1b	100	86.538	Cyprinodon_variegatus
ENSFHEG00000010264	larp1b	96	61.987	ENSDARG00000061169	larp1b	95	62.846	Danio_rerio
ENSFHEG00000010264	larp1b	72	54.363	ENSETEG00000012497	LARP1B	88	54.363	Echinops_telfairi
ENSFHEG00000010264	larp1b	82	45.135	ENSEBUG00000003668	larp1b	93	45.217	Eptatretus_burgeri
ENSFHEG00000010264	larp1b	81	55.932	ENSEASG00005018106	LARP1B	99	56.090	Equus_asinus_asinus
ENSFHEG00000010264	larp1b	86	55.489	ENSECAG00000001088	LARP1B	87	56.008	Equus_caballus
ENSFHEG00000010264	larp1b	85	52.030	ENSELUG00000023774	larp1b	93	64.200	Esox_lucius
ENSFHEG00000010264	larp1b	83	51.852	ENSFALG00000008098	LARP1B	99	52.442	Ficedula_albicollis
ENSFHEG00000010264	larp1b	85	71.761	ENSGMOG00000005207	larp1b	88	72.093	Gadus_morhua
ENSFHEG00000010264	larp1b	87	52.376	ENSGALG00000010207	LARP1B	94	52.117	Gallus_gallus
ENSFHEG00000010264	larp1b	86	85.979	ENSGAFG00000012012	larp1b	100	87.330	Gambusia_affinis
ENSFHEG00000010264	larp1b	97	68.556	ENSGACG00000004609	larp1b	100	70.062	Gasterosteus_aculeatus
ENSFHEG00000010264	larp1b	85	56.028	ENSGAGG00000017209	LARP1B	89	57.039	Gopherus_agassizii
ENSFHEG00000010264	larp1b	79	56.069	ENSGGOG00000015900	LARP1B	97	55.901	Gorilla_gorilla
ENSFHEG00000010264	larp1b	97	79.633	ENSHBUG00000009730	larp1b	100	80.116	Haplochromis_burtoni
ENSFHEG00000010264	larp1b	64	80.932	ENSHCOG00000000918	larp1b	97	80.932	Hippocampus_comes
ENSFHEG00000010264	larp1b	89	68.455	ENSIPUG00000012138	larp1b	95	61.397	Ictalurus_punctatus
ENSFHEG00000010264	larp1b	96	78.146	ENSKMAG00000011589	larp1b	100	77.073	Kryptolebias_marmoratus
ENSFHEG00000010264	larp1b	97	79.403	ENSLBEG00000005655	larp1b	100	79.500	Labrus_bergylta
ENSFHEG00000010264	larp1b	88	58.517	ENSLACG00000015247	LARP1B	89	59.519	Latimeria_chalumnae
ENSFHEG00000010264	larp1b	85	58.918	ENSLOCG00000010684	larp1b	97	59.543	Lepisosteus_oculatus
ENSFHEG00000010264	larp1b	80	56.337	ENSMFAG00000002218	LARP1B	98	56.170	Macaca_fascicularis
ENSFHEG00000010264	larp1b	80	56.350	ENSMMUG00000021347	LARP1B	98	56.183	Macaca_mulatta
ENSFHEG00000010264	larp1b	79	53.257	ENSMNEG00000030406	LARP1B	97	60.976	Macaca_nemestrina
ENSFHEG00000010264	larp1b	79	56.652	ENSMLEG00000009306	LARP1B	98	56.541	Mandrillus_leucophaeus
ENSFHEG00000010264	larp1b	96	81.232	ENSMAMG00000000081	larp1b	99	81.232	Mastacembelus_armatus
ENSFHEG00000010264	larp1b	73	80.843	ENSMZEG00005002545	larp1b	100	81.481	Maylandia_zebra
ENSFHEG00000010264	larp1b	79	49.355	ENSMGAG00000004809	LARP1B	100	50.108	Meleagris_gallopavo
ENSFHEG00000010264	larp1b	81	57.660	ENSMICG00000036111	LARP1B	99	57.447	Microcebus_murinus
ENSFHEG00000010264	larp1b	86	54.641	ENSMODG00000012300	LARP1B	90	54.131	Monodelphis_domestica
ENSFHEG00000010264	larp1b	97	79.284	ENSMALG00000003638	larp1b	100	79.284	Monopterus_albus
ENSFHEG00000010264	larp1b	86	55.380	ENSMPUG00000017365	LARP1B	89	55.459	Mustela_putorius_furo
ENSFHEG00000010264	larp1b	78	62.047	ENSMLUG00000010229	LARP1B	99	56.163	Myotis_lucifugus
ENSFHEG00000010264	larp1b	89	75.063	ENSNBRG00000023846	larp1b	100	75.823	Neolamprologus_brichardi
ENSFHEG00000010264	larp1b	79	55.901	ENSNLEG00000013819	LARP1B	97	55.734	Nomascus_leucogenys
ENSFHEG00000010264	larp1b	63	58.097	ENSMEUG00000010308	LARP1B	77	58.097	Notamacropus_eugenii
ENSFHEG00000010264	larp1b	75	50.709	ENSOPRG00000005478	LARP1B	92	51.455	Ochotona_princeps
ENSFHEG00000010264	larp1b	84	78.958	ENSONIG00000012386	larp1b	99	78.550	Oreochromis_niloticus
ENSFHEG00000010264	larp1b	82	54.489	ENSOCUG00000013330	LARP1B	99	54.593	Oryctolagus_cuniculus
ENSFHEG00000010264	larp1b	94	77.137	ENSORLG00000017954	larp1b	100	76.351	Oryzias_latipes
ENSFHEG00000010264	larp1b	95	75.000	ENSORLG00020013081	larp1b	100	74.524	Oryzias_latipes_hni
ENSFHEG00000010264	larp1b	95	77.188	ENSORLG00015009580	larp1b	100	76.641	Oryzias_latipes_hsok
ENSFHEG00000010264	larp1b	93	81.168	ENSOMEG00000004210	larp1b	100	79.614	Oryzias_melastigma
ENSFHEG00000010264	larp1b	80	57.642	ENSOGAG00000005771	LARP1B	100	57.205	Otolemur_garnettii
ENSFHEG00000010264	larp1b	80	55.638	ENSOARG00000015300	LARP1B	98	55.626	Ovis_aries
ENSFHEG00000010264	larp1b	79	56.189	ENSPPAG00000030439	LARP1B	97	56.022	Pan_paniscus
ENSFHEG00000010264	larp1b	79	56.176	ENSPTRG00000016437	LARP1B	97	56.009	Pan_troglodytes
ENSFHEG00000010264	larp1b	80	56.337	ENSPANG00000012488	LARP1B	98	56.170	Papio_anubis
ENSFHEG00000010264	larp1b	85	55.243	ENSPKIG00000014360	larp1b	97	54.904	Paramormyrops_kingsleyae
ENSFHEG00000010264	larp1b	84	56.379	ENSPSIG00000012885	LARP1B	99	57.158	Pelodiscus_sinensis
ENSFHEG00000010264	larp1b	74	72.139	ENSPMGG00000007207	larp1b	95	72.139	Periophthalmus_magnuspinnatus
ENSFHEG00000010264	larp1b	61	55.745	ENSPMAG00000002700	larp1b	99	48.110	Petromyzon_marinus
ENSFHEG00000010264	larp1b	83	56.851	ENSPCIG00000026516	LARP1B	99	61.811	Phascolarctos_cinereus
ENSFHEG00000010264	larp1b	97	85.816	ENSPFOG00000019519	larp1b	100	86.530	Poecilia_formosa
ENSFHEG00000010264	larp1b	62	86.975	ENSPFOG00000022837	-	99	87.265	Poecilia_formosa
ENSFHEG00000010264	larp1b	97	87.682	ENSPLAG00000007115	larp1b	100	88.139	Poecilia_latipinna
ENSFHEG00000010264	larp1b	97	88.354	ENSPMEG00000001224	larp1b	100	88.835	Poecilia_mexicana
ENSFHEG00000010264	larp1b	81	54.517	ENSPCAG00000007546	LARP1B	99	54.307	Procavia_capensis
ENSFHEG00000010264	larp1b	71	67.188	ENSPCOG00000021874	LARP1B	97	67.188	Propithecus_coquereli
ENSFHEG00000010264	larp1b	81	52.985	ENSPVAG00000005373	LARP1B	99	53.035	Pteropus_vampyrus
ENSFHEG00000010264	larp1b	73	79.623	ENSPNYG00000017357	larp1b	100	80.252	Pundamilia_nyererei
ENSFHEG00000010264	larp1b	93	60.345	ENSPNAG00000008823	larp1b	94	62.093	Pygocentrus_nattereri
ENSFHEG00000010264	larp1b	80	56.337	ENSRROG00000030771	LARP1B	98	56.124	Rhinopithecus_roxellana
ENSFHEG00000010264	larp1b	60	52.260	ENSSHAG00000014474	LARP1B	99	52.273	Sarcophilus_harrisii
ENSFHEG00000010264	larp1b	81	81.709	ENSSMAG00000006347	larp1b	96	80.105	Scophthalmus_maximus
ENSFHEG00000010264	larp1b	97	81.382	ENSSDUG00000004182	larp1b	100	82.150	Seriola_dumerili
ENSFHEG00000010264	larp1b	92	75.665	ENSSLDG00000014613	larp1b	99	78.493	Seriola_lalandi_dorsalis
ENSFHEG00000010264	larp1b	75	57.728	ENSSPUG00000011837	LARP1B	93	56.098	Sphenodon_punctatus
ENSFHEG00000010264	larp1b	93	82.336	ENSSPAG00000017772	larp1b	100	80.596	Stegastes_partitus
ENSFHEG00000010264	larp1b	87	53.801	ENSSSCG00000034280	LARP1B	98	80.460	Sus_scrofa
ENSFHEG00000010264	larp1b	67	60.472	ENSTGUG00000002098	-	85	60.304	Taeniopygia_guttata
ENSFHEG00000010264	larp1b	96	76.153	ENSTRUG00000005612	larp1b	99	75.310	Takifugu_rubripes
ENSFHEG00000010264	larp1b	87	74.434	ENSTNIG00000012398	larp1b	93	81.872	Tetraodon_nigroviridis
ENSFHEG00000010264	larp1b	56	60.000	ENSTBEG00000004177	LARP1B	69	58.108	Tupaia_belangeri
ENSFHEG00000010264	larp1b	73	57.299	ENSTTRG00000012984	LARP1B	89	57.416	Tursiops_truncatus
ENSFHEG00000010264	larp1b	82	56.458	ENSUMAG00000007373	LARP1B	99	56.458	Ursus_maritimus
ENSFHEG00000010264	larp1b	80	47.634	ENSVPAG00000007223	LARP1B	99	47.742	Vicugna_pacos
ENSFHEG00000010264	larp1b	82	56.563	ENSVVUG00000011307	LARP1B	99	57.094	Vulpes_vulpes
ENSFHEG00000010264	larp1b	89	51.305	ENSXETG00000022512	larp1b	96	51.562	Xenopus_tropicalis
ENSFHEG00000010264	larp1b	85	85.600	ENSXCOG00000004435	larp1b	96	85.600	Xiphophorus_couchianus
ENSFHEG00000010264	larp1b	97	87.432	ENSXMAG00000008150	larp1b	100	87.887	Xiphophorus_maculatus