EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000010672 (Gene tree)
Gene ID: 105931581
Gene Symbol: vars
Alias: CHUNP6879|im:7137378|vars2|wu:fb07a11|wu:fb07d10
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 23525 bases
Position: chrKN811373.1:983996-1007520
Accession: 105931581
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000027179	Val_tRNA-synt_C	PF10458.9	1.7e-06	1	1
ENSFHEP00000009294	Val_tRNA-synt_C	PF10458.9	1.8e-06	1	1
ENSFHEP00000027216	Val_tRNA-synt_C	PF10458.9	1.8e-06	1	1
ENSFHEP00000027179	tRNA-synt_1g	PF09334.11	3.5e-13	1	1
ENSFHEP00000009294	tRNA-synt_1g	PF09334.11	4.7e-13	1	1
ENSFHEP00000027216	tRNA-synt_1g	PF09334.11	4.7e-13	1	1
ENSFHEP00000009294	Anticodon_1	PF08264.13	7.9e-35	1	1
ENSFHEP00000027216	Anticodon_1	PF08264.13	7.9e-35	1	1
ENSFHEP00000027179	Anticodon_1	PF08264.13	3.8e-29	1	1
ENSFHEP00000009294	tRNA-synt_1	PF00133.22	6.1e-207	1	1
ENSFHEP00000027216	tRNA-synt_1	PF00133.22	6.1e-207	1	1
ENSFHEP00000027179	tRNA-synt_1	PF00133.22	1.3e-202	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000000804	-	3636	-	ENSFHEP00000027179	1211 (aa)	-	-
ENSFHET00000000722	-	4640	XM_012870314	ENSFHEP00000009294	1276 (aa)	XP_012725768	UPI000644D5B9
ENSFHET00000000692	-	5146	-	ENSFHEP00000027216	1276 (aa)	-	UPI000644D5B9

Gene Model

Click here to download ENSFHEG00000010672's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000010672's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000010672	vars	75	48.212	ENSFHEG00000013932	vars2	91	48.929

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000010672	vars	100	65.113	ENSG00000204394	VARS	99	73.006	Homo_sapiens
ENSFHEG00000010672	vars	98	87.813	ENSAPOG00000020921	vars	99	87.813	Acanthochromis_polyacanthus
ENSFHEG00000010672	vars	98	87.813	ENSAPOG00000020691	vars	99	87.813	Acanthochromis_polyacanthus
ENSFHEG00000010672	vars	100	65.295	ENSAMEG00000006417	VARS	100	65.275	Ailuropoda_melanoleuca
ENSFHEG00000010672	vars	100	88.498	ENSACIG00000013752	vars	100	88.341	Amphilophus_citrinellus
ENSFHEG00000010672	vars	100	89.812	ENSAOCG00000002447	vars	99	89.812	Amphiprion_ocellaris
ENSFHEG00000010672	vars	100	89.655	ENSAPEG00000010638	vars	99	89.655	Amphiprion_percula
ENSFHEG00000010672	vars	100	86.742	ENSATEG00000020219	vars	100	86.742	Anabas_testudineus
ENSFHEG00000010672	vars	90	71.441	ENSACAG00000029133	-	99	71.441	Anolis_carolinensis
ENSFHEG00000010672	vars	100	65.322	ENSANAG00000015453	VARS	100	65.322	Aotus_nancymaae
ENSFHEG00000010672	vars	100	90.125	ENSACLG00000025699	vars	97	90.125	Astatotilapia_calliptera
ENSFHEG00000010672	vars	96	81.017	ENSAMXG00000017716	vars	96	81.086	Astyanax_mexicanus
ENSFHEG00000010672	vars	100	65.423	ENSBTAG00000005631	VARS	100	65.346	Bos_taurus
ENSFHEG00000010672	vars	100	65.089	ENSCJAG00000002604	VARS	100	65.089	Callithrix_jacchus
ENSFHEG00000010672	vars	100	64.957	ENSCAFG00000000636	VARS	100	64.861	Canis_familiaris
ENSFHEG00000010672	vars	94	66.280	ENSCAFG00020020790	VARS	96	66.172	Canis_lupus_dingo
ENSFHEG00000010672	vars	100	65.501	ENSCHIG00000011008	VARS	100	65.346	Capra_hircus
ENSFHEG00000010672	vars	100	65.167	ENSTSYG00000001567	VARS	100	65.114	Carlito_syrichta
ENSFHEG00000010672	vars	91	68.734	ENSCAPG00000013736	VARS	98	68.307	Cavia_aperea
ENSFHEG00000010672	vars	100	65.116	ENSCPOG00000000870	VARS	100	64.724	Cavia_porcellus
ENSFHEG00000010672	vars	100	65.298	ENSCCAG00000035656	VARS	100	65.167	Cebus_capucinus
ENSFHEG00000010672	vars	100	65.271	ENSCATG00000022394	VARS	100	65.423	Cercocebus_atys
ENSFHEG00000010672	vars	89	66.723	ENSCLAG00000009470	VARS	92	66.212	Chinchilla_lanigera
ENSFHEG00000010672	vars	100	65.039	ENSCSAG00000008784	VARS	100	65.190	Chlorocebus_sabaeus
ENSFHEG00000010672	vars	79	74.203	ENSCPBG00000007943	VARS	96	74.744	Chrysemys_picta_bellii
ENSFHEG00000010672	vars	100	65.194	ENSCANG00000033570	VARS	100	65.346	Colobus_angolensis_palliatus
ENSFHEG00000010672	vars	100	65.501	ENSCGRG00001005686	Vars	100	65.579	Cricetulus_griseus_chok1gshd
ENSFHEG00000010672	vars	93	63.681	ENSCGRG00000013352	Vars	78	63.846	Cricetulus_griseus_crigri
ENSFHEG00000010672	vars	100	83.293	ENSCSEG00000019652	vars	100	83.293	Cynoglossus_semilaevis
ENSFHEG00000010672	vars	100	94.279	ENSCVAG00000022398	vars	100	94.279	Cyprinodon_variegatus
ENSFHEG00000010672	vars	100	84.495	ENSDARG00000044575	vars	100	84.417	Danio_rerio
ENSFHEG00000010672	vars	85	68.739	ENSDORG00000016433	Vars	93	71.866	Dipodomys_ordii
ENSFHEG00000010672	vars	68	74.322	ENSETEG00000003824	VARS	77	74.322	Echinops_telfairi
ENSFHEG00000010672	vars	59	63.874	ENSEBUG00000004637	vars	100	64.110	Eptatretus_burgeri
ENSFHEG00000010672	vars	53	71.629	ENSEBUG00000007086	vars	84	72.000	Eptatretus_burgeri
ENSFHEG00000010672	vars	100	65.812	ENSEASG00005015673	VARS	100	65.734	Equus_asinus_asinus
ENSFHEG00000010672	vars	100	65.761	ENSECAG00000014620	VARS	100	65.916	Equus_caballus
ENSFHEG00000010672	vars	72	71.930	ENSEEUG00000004116	VARS	72	71.930	Erinaceus_europaeus
ENSFHEG00000010672	vars	100	83.463	ENSELUG00000006550	vars	97	83.151	Esox_lucius
ENSFHEG00000010672	vars	100	65.268	ENSFCAG00000004510	VARS	100	65.346	Felis_catus
ENSFHEG00000010672	vars	83	70.553	ENSFDAG00000011401	VARS	100	70.198	Fukomys_damarensis
ENSFHEG00000010672	vars	100	80.919	ENSGMOG00000014908	vars	100	80.685	Gadus_morhua
ENSFHEG00000010672	vars	100	93.809	ENSGAFG00000021630	vars	100	93.730	Gambusia_affinis
ENSFHEG00000010672	vars	93	87.909	ENSGACG00000009601	vars	100	83.803	Gasterosteus_aculeatus
ENSFHEG00000010672	vars	50	57.788	ENSGAGG00000006508	-	91	63.651	Gopherus_agassizii
ENSFHEG00000010672	vars	100	65.271	ENSGGOG00000011364	VARS	100	65.423	Gorilla_gorilla
ENSFHEG00000010672	vars	100	90.204	ENSHBUG00000017151	vars	97	90.204	Haplochromis_burtoni
ENSFHEG00000010672	vars	100	65.319	ENSHGLG00000011646	VARS	100	65.008	Heterocephalus_glaber_female
ENSFHEG00000010672	vars	94	62.106	ENSHGLG00100018062	VARS	99	62.469	Heterocephalus_glaber_male
ENSFHEG00000010672	vars	99	84.573	ENSHCOG00000012198	vars	99	84.573	Hippocampus_comes
ENSFHEG00000010672	vars	100	83.177	ENSIPUG00000005218	vars	100	83.255	Ictalurus_punctatus
ENSFHEG00000010672	vars	100	65.579	ENSSTOG00000013112	VARS	100	65.147	Ictidomys_tridecemlineatus
ENSFHEG00000010672	vars	100	53.198	ENSJJAG00000015343	-	99	54.233	Jaculus_jaculus
ENSFHEG00000010672	vars	100	65.244	ENSJJAG00000019749	-	100	64.669	Jaculus_jaculus
ENSFHEG00000010672	vars	100	87.069	ENSKMAG00000009455	vars	100	86.520	Kryptolebias_marmoratus
ENSFHEG00000010672	vars	100	86.434	ENSLBEG00000010341	vars	100	86.434	Labrus_bergylta
ENSFHEG00000010672	vars	94	67.430	ENSLACG00000015232	VARS	99	67.213	Latimeria_chalumnae
ENSFHEG00000010672	vars	100	74.471	ENSLOCG00000004240	vars	100	74.236	Lepisosteus_oculatus
ENSFHEG00000010672	vars	100	65.086	ENSLAFG00000023090	VARS	100	65.008	Loxodonta_africana
ENSFHEG00000010672	vars	100	65.116	ENSMFAG00000001032	VARS	100	65.268	Macaca_fascicularis
ENSFHEG00000010672	vars	100	65.116	ENSMMUG00000006828	VARS	100	65.268	Macaca_mulatta
ENSFHEG00000010672	vars	100	65.116	ENSMNEG00000042072	VARS	100	65.268	Macaca_nemestrina
ENSFHEG00000010672	vars	100	65.194	ENSMLEG00000039307	VARS	100	65.346	Mandrillus_leucophaeus
ENSFHEG00000010672	vars	100	88.245	ENSMAMG00000003949	vars	100	88.088	Mastacembelus_armatus
ENSFHEG00000010672	vars	100	90.204	ENSMZEG00005018327	vars	97	90.204	Maylandia_zebra
ENSFHEG00000010672	vars	100	65.423	ENSMAUG00000006715	Vars	100	65.423	Mesocricetus_auratus
ENSFHEG00000010672	vars	100	65.349	ENSMICG00000003548	VARS	100	65.268	Microcebus_murinus
ENSFHEG00000010672	vars	100	64.386	ENSMOCG00000015404	Vars	100	64.180	Microtus_ochrogaster
ENSFHEG00000010672	vars	100	85.188	ENSMMOG00000015801	vars	100	84.953	Mola_mola
ENSFHEG00000010672	vars	100	65.581	ENSMODG00000015204	-	100	65.423	Monodelphis_domestica
ENSFHEG00000010672	vars	99	88.645	ENSMALG00000022532	vars	99	88.645	Monopterus_albus
ENSFHEG00000010672	vars	100	65.941	MGP_CAROLIEiJ_G0021491	Vars	100	65.863	Mus_caroli
ENSFHEG00000010672	vars	100	65.785	ENSMUSG00000007029	Vars	100	65.708	Mus_musculus
ENSFHEG00000010672	vars	100	65.708	MGP_PahariEiJ_G0020486	Vars	100	65.630	Mus_pahari
ENSFHEG00000010672	vars	100	65.863	MGP_SPRETEiJ_G0022396	Vars	100	65.785	Mus_spretus
ENSFHEG00000010672	vars	100	65.346	ENSMPUG00000010821	VARS	100	65.248	Mustela_putorius_furo
ENSFHEG00000010672	vars	78	68.087	ENSMLUG00000013126	VARS	100	67.925	Myotis_lucifugus
ENSFHEG00000010672	vars	100	65.163	ENSNGAG00000012151	Vars	100	65.268	Nannospalax_galili
ENSFHEG00000010672	vars	100	90.047	ENSNBRG00000020520	vars	100	90.047	Neolamprologus_brichardi
ENSFHEG00000010672	vars	100	65.268	ENSNLEG00000006351	VARS	100	65.035	Nomascus_leucogenys
ENSFHEG00000010672	vars	97	71.891	ENSMEUG00000011378	VARS	95	73.467	Notamacropus_eugenii
ENSFHEG00000010672	vars	100	65.579	ENSOPRG00000003607	VARS	100	65.501	Ochotona_princeps
ENSFHEG00000010672	vars	100	64.774	ENSODEG00000017681	VARS	100	64.450	Octodon_degus
ENSFHEG00000010672	vars	100	89.392	ENSONIG00000013064	vars	100	91.115	Oreochromis_niloticus
ENSFHEG00000010672	vars	77	67.685	ENSOANG00000005400	VARS	98	67.373	Ornithorhynchus_anatinus
ENSFHEG00000010672	vars	100	64.152	ENSOCUG00000022463	VARS	100	64.075	Oryctolagus_cuniculus
ENSFHEG00000010672	vars	100	87.938	ENSORLG00000013063	vars	100	88.093	Oryzias_latipes
ENSFHEG00000010672	vars	100	88.507	ENSORLG00020003504	vars	100	88.585	Oryzias_latipes_hni
ENSFHEG00000010672	vars	100	88.811	ENSORLG00015009001	vars	100	88.811	Oryzias_latipes_hsok
ENSFHEG00000010672	vars	100	89.045	ENSOMEG00000015016	vars	100	88.967	Oryzias_melastigma
ENSFHEG00000010672	vars	100	64.934	ENSOGAG00000007515	VARS	100	64.856	Otolemur_garnettii
ENSFHEG00000010672	vars	50	63.963	ENSOARG00000004625	-	91	64.075	Ovis_aries
ENSFHEG00000010672	vars	100	65.113	ENSPPAG00000034012	VARS	100	65.113	Pan_paniscus
ENSFHEG00000010672	vars	100	65.268	ENSPPRG00000014855	VARS	100	65.346	Panthera_pardus
ENSFHEG00000010672	vars	85	69.442	ENSPTIG00000010462	VARS	94	69.078	Panthera_tigris_altaica
ENSFHEG00000010672	vars	100	65.035	ENSPTRG00000017985	VARS	100	65.035	Pan_troglodytes
ENSFHEG00000010672	vars	100	63.812	ENSPANG00000014565	VARS	100	63.960	Papio_anubis
ENSFHEG00000010672	vars	100	80.467	ENSPKIG00000016304	vars	100	80.156	Paramormyrops_kingsleyae
ENSFHEG00000010672	vars	100	84.091	ENSPMGG00000023909	vars	100	83.777	Periophthalmus_magnuspinnatus
ENSFHEG00000010672	vars	100	65.113	ENSPEMG00000006639	Vars	100	65.190	Peromyscus_maniculatus_bairdii
ENSFHEG00000010672	vars	100	65.426	ENSPCIG00000018553	VARS	100	65.035	Phascolarctos_cinereus
ENSFHEG00000010672	vars	100	93.809	ENSPFOG00000015690	vars	100	93.339	Poecilia_formosa
ENSFHEG00000010672	vars	100	93.574	ENSPLAG00000009590	vars	100	93.103	Poecilia_latipinna
ENSFHEG00000010672	vars	100	93.730	ENSPMEG00000004708	vars	100	93.260	Poecilia_mexicana
ENSFHEG00000010672	vars	100	88.636	ENSPREG00000013264	vars	97	95.277	Poecilia_reticulata
ENSFHEG00000010672	vars	100	63.947	ENSPPYG00000016460	VARS	100	63.968	Pongo_abelii
ENSFHEG00000010672	vars	86	67.318	ENSPCAG00000013565	VARS	86	67.318	Procavia_capensis
ENSFHEG00000010672	vars	100	65.140	ENSPCOG00000010942	VARS	100	65.217	Propithecus_coquereli
ENSFHEG00000010672	vars	100	62.742	ENSPVAG00000012403	VARS	100	62.917	Pteropus_vampyrus
ENSFHEG00000010672	vars	100	90.282	ENSPNYG00000022511	vars	100	90.282	Pundamilia_nyererei
ENSFHEG00000010672	vars	100	82.826	ENSPNAG00000020962	vars	100	83.450	Pygocentrus_nattereri
ENSFHEG00000010672	vars	100	65.423	ENSRNOG00000000867	Vars	100	65.190	Rattus_norvegicus
ENSFHEG00000010672	vars	100	65.116	ENSRBIG00000041669	VARS	100	65.268	Rhinopithecus_bieti
ENSFHEG00000010672	vars	100	65.116	ENSRROG00000045490	VARS	100	65.268	Rhinopithecus_roxellana
ENSFHEG00000010672	vars	100	65.167	ENSSBOG00000035402	VARS	100	65.167	Saimiri_boliviensis_boliviensis
ENSFHEG00000010672	vars	100	64.927	ENSSHAG00000006937	VARS	100	65.000	Sarcophilus_harrisii
ENSFHEG00000010672	vars	100	80.715	ENSSFOG00015014272	vars	98	85.061	Scleropages_formosus
ENSFHEG00000010672	vars	100	87.637	ENSSMAG00000009596	vars	99	87.637	Scophthalmus_maximus
ENSFHEG00000010672	vars	100	89.358	ENSSDUG00000014177	vars	100	89.358	Seriola_dumerili
ENSFHEG00000010672	vars	100	88.967	ENSSLDG00000025316	vars	100	88.967	Seriola_lalandi_dorsalis
ENSFHEG00000010672	vars	100	89.028	ENSSPAG00000017068	vars	100	89.028	Stegastes_partitus
ENSFHEG00000010672	vars	100	64.907	ENSSSCG00000038950	VARS	100	64.907	Sus_scrofa
ENSFHEG00000010672	vars	81	81.033	ENSTRUG00000012307	vars	97	80.424	Takifugu_rubripes
ENSFHEG00000010672	vars	100	84.820	ENSTNIG00000008011	vars	100	84.820	Tetraodon_nigroviridis
ENSFHEG00000010672	vars	100	59.826	ENSTTRG00000014128	VARS	100	59.826	Tursiops_truncatus
ENSFHEG00000010672	vars	100	63.869	ENSUAMG00000010424	VARS	100	63.997	Ursus_americanus
ENSFHEG00000010672	vars	100	60.280	ENSUMAG00000013486	VARS	98	64.599	Ursus_maritimus
ENSFHEG00000010672	vars	100	65.322	ENSVVUG00000021323	VARS	100	65.262	Vulpes_vulpes
ENSFHEG00000010672	vars	100	64.130	ENSXETG00000024076	vars	100	63.700	Xenopus_tropicalis
ENSFHEG00000010672	vars	100	90.596	ENSXCOG00000019172	vars	100	90.596	Xiphophorus_couchianus
ENSFHEG00000010672	vars	100	93.809	ENSXMAG00000010927	vars	100	93.417	Xiphophorus_maculatus