EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000010866 (Gene tree)
Gene ID: 105919433
Gene Symbol: sf3a1
Alias: si:dz150f13.2|wu:fc38e01|wu:fc50a11|wu:fj37c05
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 11491 bases
Position: chrKN805957.1:2644-14134
Accession: 105919433
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000027383	PRP21_like_P	PF12230.8	5.9e-53	1	1
ENSFHEP00000009546	PRP21_like_P	PF12230.8	7e-53	1	1
ENSFHEP00000027383	Surp	PF01805.20	6.6e-46	1	2
ENSFHEP00000027383	Surp	PF01805.20	6.6e-46	2	2
ENSFHEP00000009546	Surp	PF01805.20	8.2e-46	1	2
ENSFHEP00000009546	Surp	PF01805.20	8.2e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000000306	-	3728	-	ENSFHEP00000009546	851 (aa)	-	-
ENSFHET00000000284	-	3926	XM_012854744	ENSFHEP00000027383	786 (aa)	XP_012710198	UPI0006449B6F

Gene Model

Click here to download ENSFHEG00000010866's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000010866's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000010866	sf3a1	98	85.547	ENSG00000099995	SF3A1	100	84.277	Homo_sapiens
ENSFHEG00000010866	sf3a1	100	94.155	ENSAPOG00000020465	sf3a1	100	94.155	Acanthochromis_polyacanthus
ENSFHEG00000010866	sf3a1	98	85.026	ENSAMEG00000007737	SF3A1	100	83.814	Ailuropoda_melanoleuca
ENSFHEG00000010866	sf3a1	100	94.155	ENSACIG00000020672	sf3a1	100	94.155	Amphilophus_citrinellus
ENSFHEG00000010866	sf3a1	100	93.774	ENSAOCG00000003060	sf3a1	100	93.774	Amphiprion_ocellaris
ENSFHEG00000010866	sf3a1	100	93.901	ENSAPEG00000010735	sf3a1	100	93.901	Amphiprion_percula
ENSFHEG00000010866	sf3a1	97	94.118	ENSATEG00000021201	sf3a1	96	94.118	Anabas_testudineus
ENSFHEG00000010866	sf3a1	96	84.980	ENSAPLG00000009057	SF3A1	100	83.673	Anas_platyrhynchos
ENSFHEG00000010866	sf3a1	100	81.358	ENSACAG00000009415	SF3A1	100	80.864	Anolis_carolinensis
ENSFHEG00000010866	sf3a1	98	85.286	ENSANAG00000032045	SF3A1	100	84.025	Aotus_nancymaae
ENSFHEG00000010866	sf3a1	100	92.884	ENSACLG00000012622	sf3a1	100	93.266	Astatotilapia_calliptera
ENSFHEG00000010866	sf3a1	99	87.532	ENSAMXG00000005382	sf3a1	99	87.786	Astyanax_mexicanus
ENSFHEG00000010866	sf3a1	98	85.417	ENSBTAG00000003390	SF3A1	100	84.151	Bos_taurus
ENSFHEG00000010866	sf3a1	80	45.349	WBGene00004188	prp-21	90	44.045	Caenorhabditis_elegans
ENSFHEG00000010866	sf3a1	98	85.417	ENSCJAG00000010370	SF3A1	100	84.403	Callithrix_jacchus
ENSFHEG00000010866	sf3a1	98	85.026	ENSCAFG00000012559	SF3A1	100	83.774	Canis_familiaris
ENSFHEG00000010866	sf3a1	98	85.026	ENSCAFG00020000838	SF3A1	100	83.774	Canis_lupus_dingo
ENSFHEG00000010866	sf3a1	98	85.547	ENSCHIG00000018642	SF3A1	100	84.277	Capra_hircus
ENSFHEG00000010866	sf3a1	98	85.286	ENSTSYG00000004739	SF3A1	100	84.025	Carlito_syrichta
ENSFHEG00000010866	sf3a1	95	68.435	ENSCAPG00000015414	SF3A1	98	68.966	Cavia_aperea
ENSFHEG00000010866	sf3a1	99	84.359	ENSCPOG00000014589	SF3A1	100	84.151	Cavia_porcellus
ENSFHEG00000010866	sf3a1	98	85.286	ENSCCAG00000032006	SF3A1	100	84.025	Cebus_capucinus
ENSFHEG00000010866	sf3a1	98	85.547	ENSCATG00000029241	SF3A1	100	84.277	Cercocebus_atys
ENSFHEG00000010866	sf3a1	98	85.417	ENSCLAG00000006508	SF3A1	100	84.151	Chinchilla_lanigera
ENSFHEG00000010866	sf3a1	98	85.547	ENSCSAG00000009470	SF3A1	100	84.277	Chlorocebus_sabaeus
ENSFHEG00000010866	sf3a1	58	90.476	ENSCHOG00000005201	SF3A1	64	92.405	Choloepus_hoffmanni
ENSFHEG00000010866	sf3a1	100	83.102	ENSCPBG00000007595	SF3A1	100	83.228	Chrysemys_picta_bellii
ENSFHEG00000010866	sf3a1	97	52.490	ENSCING00000008526	-	66	57.553	Ciona_intestinalis
ENSFHEG00000010866	sf3a1	93	64.103	ENSCSAVG00000005608	-	91	65.179	Ciona_savignyi
ENSFHEG00000010866	sf3a1	98	85.547	ENSCANG00000033564	SF3A1	100	84.277	Colobus_angolensis_palliatus
ENSFHEG00000010866	sf3a1	97	85.526	ENSCGRG00001008933	Sf3a1	100	83.899	Cricetulus_griseus_chok1gshd
ENSFHEG00000010866	sf3a1	97	85.526	ENSCGRG00000006127	Sf3a1	100	83.899	Cricetulus_griseus_crigri
ENSFHEG00000010866	sf3a1	100	90.228	ENSCSEG00000010792	sf3a1	100	89.975	Cynoglossus_semilaevis
ENSFHEG00000010866	sf3a1	100	94.529	ENSCVAG00000004560	sf3a1	100	94.529	Cyprinodon_variegatus
ENSFHEG00000010866	sf3a1	100	86.185	ENSDARG00000041887	sf3a1	100	89.266	Danio_rerio
ENSFHEG00000010866	sf3a1	98	85.696	ENSDNOG00000010629	SF3A1	100	83.920	Dasypus_novemcinctus
ENSFHEG00000010866	sf3a1	98	85.286	ENSDORG00000005613	Sf3a1	100	84.025	Dipodomys_ordii
ENSFHEG00000010866	sf3a1	84	61.017	FBgn0266917	Sf3a1	82	59.704	Drosophila_melanogaster
ENSFHEG00000010866	sf3a1	85	83.558	ENSETEG00000017194	SF3A1	99	81.779	Echinops_telfairi
ENSFHEG00000010866	sf3a1	98	67.946	ENSEBUG00000001285	sf3a1	95	69.511	Eptatretus_burgeri
ENSFHEG00000010866	sf3a1	98	85.417	ENSEASG00005010254	SF3A1	100	84.151	Equus_asinus_asinus
ENSFHEG00000010866	sf3a1	98	85.417	ENSECAG00000023962	SF3A1	100	84.151	Equus_caballus
ENSFHEG00000010866	sf3a1	74	91.803	ENSEEUG00000003159	SF3A1	83	91.803	Erinaceus_europaeus
ENSFHEG00000010866	sf3a1	100	86.819	ENSELUG00000022578	sf3a1	100	86.946	Esox_lucius
ENSFHEG00000010866	sf3a1	98	85.156	ENSFCAG00000011932	SF3A1	100	83.899	Felis_catus
ENSFHEG00000010866	sf3a1	96	83.487	ENSFALG00000006944	SF3A1	100	82.494	Ficedula_albicollis
ENSFHEG00000010866	sf3a1	98	85.417	ENSFDAG00000009560	SF3A1	100	84.151	Fukomys_damarensis
ENSFHEG00000010866	sf3a1	100	87.294	ENSGMOG00000016024	sf3a1	100	86.146	Gadus_morhua
ENSFHEG00000010866	sf3a1	96	85.488	ENSGALG00000007937	SF3A1	100	82.685	Gallus_gallus
ENSFHEG00000010866	sf3a1	100	96.183	ENSGAFG00000009111	sf3a1	100	96.183	Gambusia_affinis
ENSFHEG00000010866	sf3a1	100	88.510	ENSGACG00000011893	sf3a1	100	88.005	Gasterosteus_aculeatus
ENSFHEG00000010866	sf3a1	96	81.842	ENSGAGG00000000762	SF3A1	99	82.632	Gopherus_agassizii
ENSFHEG00000010866	sf3a1	98	85.547	ENSGGOG00000012631	SF3A1	100	84.277	Gorilla_gorilla
ENSFHEG00000010866	sf3a1	100	94.028	ENSHBUG00000015795	sf3a1	100	93.266	Haplochromis_burtoni
ENSFHEG00000010866	sf3a1	99	84.359	ENSHGLG00000007907	SF3A1	100	84.151	Heterocephalus_glaber_female
ENSFHEG00000010866	sf3a1	99	84.359	ENSHGLG00100013799	SF3A1	100	84.151	Heterocephalus_glaber_male
ENSFHEG00000010866	sf3a1	100	88.452	ENSHCOG00000015423	sf3a1	100	87.563	Hippocampus_comes
ENSFHEG00000010866	sf3a1	98	85.271	ENSIPUG00000002470	sf3a1	99	85.659	Ictalurus_punctatus
ENSFHEG00000010866	sf3a1	97	85.528	ENSSTOG00000013892	SF3A1	100	84.151	Ictidomys_tridecemlineatus
ENSFHEG00000010866	sf3a1	98	85.417	ENSJJAG00000022566	Sf3a1	100	84.045	Jaculus_jaculus
ENSFHEG00000010866	sf3a1	100	93.774	ENSKMAG00000002400	sf3a1	100	93.774	Kryptolebias_marmoratus
ENSFHEG00000010866	sf3a1	100	91.741	ENSLBEG00000022974	sf3a1	100	90.724	Labrus_bergylta
ENSFHEG00000010866	sf3a1	100	84.051	ENSLACG00000003565	SF3A1	100	84.304	Latimeria_chalumnae
ENSFHEG00000010866	sf3a1	100	87.863	ENSLOCG00000008251	sf3a1	100	87.783	Lepisosteus_oculatus
ENSFHEG00000010866	sf3a1	98	85.286	ENSLAFG00000000448	SF3A1	100	84.025	Loxodonta_africana
ENSFHEG00000010866	sf3a1	99	55.444	ENSLAFG00000026032	-	99	53.942	Loxodonta_africana
ENSFHEG00000010866	sf3a1	98	85.417	ENSMFAG00000031979	SF3A1	100	84.151	Macaca_fascicularis
ENSFHEG00000010866	sf3a1	98	85.417	ENSMMUG00000005547	SF3A1	100	84.151	Macaca_mulatta
ENSFHEG00000010866	sf3a1	98	85.547	ENSMNEG00000037229	SF3A1	100	84.277	Macaca_nemestrina
ENSFHEG00000010866	sf3a1	98	85.547	ENSMLEG00000041908	SF3A1	100	84.277	Mandrillus_leucophaeus
ENSFHEG00000010866	sf3a1	98	93.135	ENSMAMG00000006460	sf3a1	97	93.135	Mastacembelus_armatus
ENSFHEG00000010866	sf3a1	100	92.884	ENSMZEG00005009633	sf3a1	100	93.266	Maylandia_zebra
ENSFHEG00000010866	sf3a1	96	85.488	ENSMGAG00000001330	SF3A1	99	84.525	Meleagris_gallopavo
ENSFHEG00000010866	sf3a1	93	81.471	ENSMAUG00000020317	Sf3a1	100	78.354	Mesocricetus_auratus
ENSFHEG00000010866	sf3a1	98	85.286	ENSMICG00000010038	SF3A1	100	84.025	Microcebus_murinus
ENSFHEG00000010866	sf3a1	97	85.137	ENSMOCG00000008438	Sf3a1	100	84.025	Microtus_ochrogaster
ENSFHEG00000010866	sf3a1	100	87.929	ENSMMOG00000015588	sf3a1	99	88.056	Mola_mola
ENSFHEG00000010866	sf3a1	98	83.528	ENSMODG00000009270	SF3A1	100	83.627	Monodelphis_domestica
ENSFHEG00000010866	sf3a1	100	92.640	ENSMALG00000000148	sf3a1	100	93.020	Monopterus_albus
ENSFHEG00000010866	sf3a1	98	84.456	MGP_CAROLIEiJ_G0016029	Sf3a1	99	82.955	Mus_caroli
ENSFHEG00000010866	sf3a1	98	84.456	ENSMUSG00000002129	Sf3a1	99	82.955	Mus_musculus
ENSFHEG00000010866	sf3a1	98	84.326	MGP_PahariEiJ_G0016862	Sf3a1	99	84.091	Mus_pahari
ENSFHEG00000010866	sf3a1	98	84.456	MGP_SPRETEiJ_G0016870	Sf3a1	99	82.955	Mus_spretus
ENSFHEG00000010866	sf3a1	98	84.245	ENSMPUG00000013144	SF3A1	100	83.899	Mustela_putorius_furo
ENSFHEG00000010866	sf3a1	98	84.974	ENSMLUG00000002139	SF3A1	100	84.151	Myotis_lucifugus
ENSFHEG00000010866	sf3a1	99	84.419	ENSNGAG00000016977	Sf3a1	100	84.025	Nannospalax_galili
ENSFHEG00000010866	sf3a1	100	93.401	ENSNBRG00000016642	sf3a1	100	92.640	Neolamprologus_brichardi
ENSFHEG00000010866	sf3a1	98	85.547	ENSNLEG00000003686	SF3A1	100	84.277	Nomascus_leucogenys
ENSFHEG00000010866	sf3a1	94	75.610	ENSMEUG00000008741	SF3A1	100	75.164	Notamacropus_eugenii
ENSFHEG00000010866	sf3a1	98	85.104	ENSOPRG00000016636	SF3A1	100	84.673	Ochotona_princeps
ENSFHEG00000010866	sf3a1	98	85.084	ENSODEG00000002571	SF3A1	100	84.257	Octodon_degus
ENSFHEG00000010866	sf3a1	100	93.901	ENSONIG00000010848	sf3a1	100	93.139	Oreochromis_niloticus
ENSFHEG00000010866	sf3a1	98	84.715	ENSOCUG00000007633	SF3A1	100	83.899	Oryctolagus_cuniculus
ENSFHEG00000010866	sf3a1	96	93.634	ENSORLG00000013050	sf3a1	99	92.175	Oryzias_latipes
ENSFHEG00000010866	sf3a1	99	90.537	ENSORLG00020003236	sf3a1	97	90.272	Oryzias_latipes_hni
ENSFHEG00000010866	sf3a1	100	93.139	ENSORLG00015017411	sf3a1	100	91.741	Oryzias_latipes_hsok
ENSFHEG00000010866	sf3a1	100	93.011	ENSOMEG00000013362	sf3a1	100	92.376	Oryzias_melastigma
ENSFHEG00000010866	sf3a1	98	85.286	ENSOGAG00000012931	SF3A1	100	84.025	Otolemur_garnettii
ENSFHEG00000010866	sf3a1	98	84.245	ENSOARG00000006849	SF3A1	100	82.642	Ovis_aries
ENSFHEG00000010866	sf3a1	98	84.766	ENSPPAG00000041790	SF3A1	100	83.396	Pan_paniscus
ENSFHEG00000010866	sf3a1	98	85.156	ENSPPRG00000004391	SF3A1	100	83.899	Panthera_pardus
ENSFHEG00000010866	sf3a1	98	85.026	ENSPTIG00000000844	SF3A1	99	85.547	Panthera_tigris_altaica
ENSFHEG00000010866	sf3a1	98	85.547	ENSPTRG00000014240	SF3A1	100	84.277	Pan_troglodytes
ENSFHEG00000010866	sf3a1	98	85.547	ENSPANG00000020772	SF3A1	100	84.277	Papio_anubis
ENSFHEG00000010866	sf3a1	81	92.308	ENSPSIG00000012803	SF3A1	96	92.308	Pelodiscus_sinensis
ENSFHEG00000010866	sf3a1	97	90.196	ENSPMGG00000023096	sf3a1	100	90.719	Periophthalmus_magnuspinnatus
ENSFHEG00000010866	sf3a1	97	85.658	ENSPEMG00000009494	Sf3a1	100	84.025	Peromyscus_maniculatus_bairdii
ENSFHEG00000010866	sf3a1	69	78.102	ENSPMAG00000007139	-	93	78.102	Petromyzon_marinus
ENSFHEG00000010866	sf3a1	97	84.485	ENSPCIG00000022692	SF3A1	100	83.501	Phascolarctos_cinereus
ENSFHEG00000010866	sf3a1	100	86.041	ENSPFOG00000016768	sf3a1	100	86.041	Poecilia_formosa
ENSFHEG00000010866	sf3a1	100	96.819	ENSPLAG00000017268	sf3a1	100	96.819	Poecilia_latipinna
ENSFHEG00000010866	sf3a1	96	96.386	ENSPMEG00000019811	sf3a1	100	96.386	Poecilia_mexicana
ENSFHEG00000010866	sf3a1	100	96.565	ENSPREG00000010347	sf3a1	100	96.565	Poecilia_reticulata
ENSFHEG00000010866	sf3a1	98	85.547	ENSPPYG00000011707	SF3A1	100	84.277	Pongo_abelii
ENSFHEG00000010866	sf3a1	57	83.884	ENSPCAG00000003266	SF3A1	57	83.884	Procavia_capensis
ENSFHEG00000010866	sf3a1	98	85.286	ENSPCOG00000026630	SF3A1	100	84.025	Propithecus_coquereli
ENSFHEG00000010866	sf3a1	95	85.141	ENSPVAG00000017719	SF3A1	94	85.676	Pteropus_vampyrus
ENSFHEG00000010866	sf3a1	100	93.901	ENSPNYG00000018706	sf3a1	100	93.139	Pundamilia_nyererei
ENSFHEG00000010866	sf3a1	99	87.405	ENSPNAG00000003721	sf3a1	99	87.277	Pygocentrus_nattereri
ENSFHEG00000010866	sf3a1	99	84.278	ENSRNOG00000005218	Sf3a1	99	82.741	Rattus_norvegicus
ENSFHEG00000010866	sf3a1	98	85.547	ENSRBIG00000032167	SF3A1	100	84.277	Rhinopithecus_bieti
ENSFHEG00000010866	sf3a1	98	85.547	ENSRROG00000044908	SF3A1	100	84.277	Rhinopithecus_roxellana
ENSFHEG00000010866	sf3a1	93	85.578	ENSSBOG00000021960	SF3A1	98	86.015	Saimiri_boliviensis_boliviensis
ENSFHEG00000010866	sf3a1	98	80.934	ENSSHAG00000003666	SF3A1	97	82.490	Sarcophilus_harrisii
ENSFHEG00000010866	sf3a1	100	89.128	ENSSFOG00015004579	sf3a1	100	89.633	Scleropages_formosus
ENSFHEG00000010866	sf3a1	100	89.454	ENSSMAG00000004275	sf3a1	100	88.310	Scophthalmus_maximus
ENSFHEG00000010866	sf3a1	100	92.884	ENSSDUG00000022219	sf3a1	100	92.249	Seriola_dumerili
ENSFHEG00000010866	sf3a1	100	92.884	ENSSLDG00000012642	sf3a1	100	92.249	Seriola_lalandi_dorsalis
ENSFHEG00000010866	sf3a1	98	81.995	ENSSARG00000005960	SF3A1	99	82.513	Sorex_araneus
ENSFHEG00000010866	sf3a1	96	83.636	ENSSPUG00000018863	SF3A1	100	83.313	Sphenodon_punctatus
ENSFHEG00000010866	sf3a1	100	93.266	ENSSPAG00000011856	sf3a1	100	92.503	Stegastes_partitus
ENSFHEG00000010866	sf3a1	98	84.635	ENSSSCG00000010002	SF3A1	100	84.151	Sus_scrofa
ENSFHEG00000010866	sf3a1	96	84.868	ENSTGUG00000010547	SF3A1	99	84.766	Taeniopygia_guttata
ENSFHEG00000010866	sf3a1	100	89.454	ENSTRUG00000006118	sf3a1	100	88.564	Takifugu_rubripes
ENSFHEG00000010866	sf3a1	64	86.617	ENSTNIG00000005713	sf3a1	89	88.496	Tetraodon_nigroviridis
ENSFHEG00000010866	sf3a1	98	78.886	ENSTBEG00000012771	SF3A1	100	78.239	Tupaia_belangeri
ENSFHEG00000010866	sf3a1	98	84.915	ENSTTRG00000001535	SF3A1	100	83.794	Tursiops_truncatus
ENSFHEG00000010866	sf3a1	99	82.510	ENSUAMG00000006750	SF3A1	99	83.016	Ursus_americanus
ENSFHEG00000010866	sf3a1	99	84.299	ENSUMAG00000016665	SF3A1	99	84.813	Ursus_maritimus
ENSFHEG00000010866	sf3a1	98	85.026	ENSVVUG00000003075	SF3A1	100	83.774	Vulpes_vulpes
ENSFHEG00000010866	sf3a1	100	78.321	ENSXETG00000016144	sf3a1	96	83.871	Xenopus_tropicalis
ENSFHEG00000010866	sf3a1	100	96.056	ENSXCOG00000015653	sf3a1	100	96.056	Xiphophorus_couchianus
ENSFHEG00000010866	sf3a1	100	96.310	ENSXMAG00000002753	sf3a1	100	96.310	Xiphophorus_maculatus