EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000010880 (Gene tree)
Gene ID: 105916058
Gene Symbol: cpsf4
Alias: nar|no arches
Full Name: cleavage and polyadenylation specific factor 4
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 7275 bases
Position: chrKN805687.1:67839-75113
Accession: 105916058
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000027414	zf-CCCH	PF00642.24	1.3e-20	1	2
ENSFHEP00000027414	zf-CCCH	PF00642.24	1.3e-20	2	2
ENSFHEP00000027414	zf-CCHC	PF00098.23	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000000192	-	4649	XM_012850361	ENSFHEP00000027414	265 (aa)	XP_012705815	UPI0006449851

Gene Model

Click here to download ENSFHEG00000010880's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000010880's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000010880	cpsf4	100	82.963	ENSG00000160917	CPSF4	100	98.214	Homo_sapiens
ENSFHEG00000010880	cpsf4	67	83.616	ENSAPOG00000004921	cpsf4	100	83.616	Acanthochromis_polyacanthus
ENSFHEG00000010880	cpsf4	100	83.333	ENSAMEG00000006252	CPSF4	100	83.333	Ailuropoda_melanoleuca
ENSFHEG00000010880	cpsf4	100	83.774	ENSACIG00000009248	cpsf4	100	84.906	Amphilophus_citrinellus
ENSFHEG00000010880	cpsf4	100	91.321	ENSAOCG00000019616	cpsf4	100	91.321	Amphiprion_ocellaris
ENSFHEG00000010880	cpsf4	100	91.321	ENSAPEG00000011679	cpsf4	100	91.321	Amphiprion_percula
ENSFHEG00000010880	cpsf4	100	92.509	ENSATEG00000007010	cpsf4	100	92.509	Anabas_testudineus
ENSFHEG00000010880	cpsf4	100	80.370	ENSACAG00000012941	CPSF4	89	80.370	Anolis_carolinensis
ENSFHEG00000010880	cpsf4	100	82.963	ENSANAG00000021360	CPSF4	100	82.963	Aotus_nancymaae
ENSFHEG00000010880	cpsf4	100	90.566	ENSACLG00000010374	cpsf4	100	90.566	Astatotilapia_calliptera
ENSFHEG00000010880	cpsf4	100	83.704	ENSAMXG00000031647	cpsf4	100	83.704	Astyanax_mexicanus
ENSFHEG00000010880	cpsf4	100	79.623	ENSBTAG00000002090	CPSF4	100	79.623	Bos_taurus
ENSFHEG00000010880	cpsf4	100	82.963	ENSCJAG00000015826	CPSF4	100	82.963	Callithrix_jacchus
ENSFHEG00000010880	cpsf4	100	83.333	ENSCAFG00000015036	CPSF4	99	87.879	Canis_familiaris
ENSFHEG00000010880	cpsf4	100	78.889	ENSCAFG00020014462	CPSF4	100	78.889	Canis_lupus_dingo
ENSFHEG00000010880	cpsf4	100	82.963	ENSCHIG00000014313	CPSF4	100	82.963	Capra_hircus
ENSFHEG00000010880	cpsf4	100	72.556	ENSTSYG00000014604	-	100	72.556	Carlito_syrichta
ENSFHEG00000010880	cpsf4	100	80.000	ENSTSYG00000005712	-	100	80.000	Carlito_syrichta
ENSFHEG00000010880	cpsf4	89	74.262	ENSTSYG00000008195	-	99	74.390	Carlito_syrichta
ENSFHEG00000010880	cpsf4	82	82.353	ENSCAPG00000013881	CPSF4	88	81.614	Cavia_aperea
ENSFHEG00000010880	cpsf4	100	80.377	ENSCPOG00000001783	CPSF4	100	80.377	Cavia_porcellus
ENSFHEG00000010880	cpsf4	100	82.963	ENSCCAG00000028291	CPSF4	100	82.963	Cebus_capucinus
ENSFHEG00000010880	cpsf4	100	82.963	ENSCATG00000038440	CPSF4	100	82.963	Cercocebus_atys
ENSFHEG00000010880	cpsf4	100	82.963	ENSCLAG00000007050	CPSF4	100	82.963	Chinchilla_lanigera
ENSFHEG00000010880	cpsf4	100	82.963	ENSCSAG00000017795	CPSF4	100	82.963	Chlorocebus_sabaeus
ENSFHEG00000010880	cpsf4	62	79.394	ENSCPBG00000010269	-	99	79.394	Chrysemys_picta_bellii
ENSFHEG00000010880	cpsf4	80	82.028	ENSCPBG00000020869	CPSF4	100	82.028	Chrysemys_picta_bellii
ENSFHEG00000010880	cpsf4	96	57.087	ENSCING00000021080	-	96	57.087	Ciona_intestinalis
ENSFHEG00000010880	cpsf4	96	54.577	ENSCSAVG00000011469	-	97	54.577	Ciona_savignyi
ENSFHEG00000010880	cpsf4	100	82.963	ENSCANG00000019384	CPSF4	100	82.963	Colobus_angolensis_palliatus
ENSFHEG00000010880	cpsf4	100	80.377	ENSCGRG00001024184	Cpsf4	100	80.377	Cricetulus_griseus_chok1gshd
ENSFHEG00000010880	cpsf4	100	83.333	ENSCGRG00000013892	Cpsf4	100	83.333	Cricetulus_griseus_crigri
ENSFHEG00000010880	cpsf4	100	88.302	ENSCSEG00000019055	cpsf4	100	88.302	Cynoglossus_semilaevis
ENSFHEG00000010880	cpsf4	100	95.849	ENSCVAG00000016528	cpsf4	100	95.849	Cyprinodon_variegatus
ENSFHEG00000010880	cpsf4	100	83.395	ENSDARG00000020217	cpsf4	100	83.395	Danio_rerio
ENSFHEG00000010880	cpsf4	100	83.333	ENSDNOG00000006344	CPSF4	100	83.333	Dasypus_novemcinctus
ENSFHEG00000010880	cpsf4	80	82.569	ENSDORG00000000742	Cpsf4	100	82.569	Dipodomys_ordii
ENSFHEG00000010880	cpsf4	100	54.452	FBgn0015621	Clp	99	54.181	Drosophila_melanogaster
ENSFHEG00000010880	cpsf4	71	93.333	ENSETEG00000002608	CPSF4	70	93.333	Echinops_telfairi
ENSFHEG00000010880	cpsf4	99	65.779	ENSEBUG00000012552	cpsf4	98	65.779	Eptatretus_burgeri
ENSFHEG00000010880	cpsf4	100	80.377	ENSEASG00005002487	CPSF4	100	80.377	Equus_asinus_asinus
ENSFHEG00000010880	cpsf4	100	83.333	ENSECAG00000007525	CPSF4	100	83.333	Equus_caballus
ENSFHEG00000010880	cpsf4	63	92.537	ENSEEUG00000002158	CPSF4	73	92.537	Erinaceus_europaeus
ENSFHEG00000010880	cpsf4	100	82.353	ENSELUG00000011481	cpsf4	100	82.353	Esox_lucius
ENSFHEG00000010880	cpsf4	100	83.333	ENSFCAG00000015070	CPSF4	100	83.333	Felis_catus
ENSFHEG00000010880	cpsf4	100	79.245	ENSFALG00000013799	CPSF4	100	79.245	Ficedula_albicollis
ENSFHEG00000010880	cpsf4	62	56.977	ENSFALG00000012906	-	100	56.977	Ficedula_albicollis
ENSFHEG00000010880	cpsf4	90	81.967	ENSFDAG00000014092	CPSF4	100	81.967	Fukomys_damarensis
ENSFHEG00000010880	cpsf4	100	80.812	ENSGMOG00000002330	cpsf4	100	80.812	Gadus_morhua
ENSFHEG00000010880	cpsf4	100	79.623	ENSGALG00000004714	CPSF4	100	79.623	Gallus_gallus
ENSFHEG00000010880	cpsf4	99	35.714	ENSGALG00000004441	-	98	35.714	Gallus_gallus
ENSFHEG00000010880	cpsf4	100	96.226	ENSGAFG00000010580	cpsf4	100	96.226	Gambusia_affinis
ENSFHEG00000010880	cpsf4	100	83.955	ENSGACG00000007792	cpsf4	100	83.955	Gasterosteus_aculeatus
ENSFHEG00000010880	cpsf4	69	75.824	ENSGAGG00000020579	-	100	75.824	Gopherus_agassizii
ENSFHEG00000010880	cpsf4	100	82.593	ENSGAGG00000021835	CPSF4	100	82.593	Gopherus_agassizii
ENSFHEG00000010880	cpsf4	100	82.963	ENSGGOG00000015131	CPSF4	100	82.963	Gorilla_gorilla
ENSFHEG00000010880	cpsf4	100	90.566	ENSHBUG00000013699	cpsf4	100	90.566	Haplochromis_burtoni
ENSFHEG00000010880	cpsf4	100	83.026	ENSHGLG00000017150	CPSF4	100	83.026	Heterocephalus_glaber_female
ENSFHEG00000010880	cpsf4	87	80.085	ENSHGLG00100009215	-	100	80.085	Heterocephalus_glaber_male
ENSFHEG00000010880	cpsf4	74	63.959	ENSHGLG00100017302	-	93	63.959	Heterocephalus_glaber_male
ENSFHEG00000010880	cpsf4	100	87.218	ENSHCOG00000004397	cpsf4	100	87.218	Hippocampus_comes
ENSFHEG00000010880	cpsf4	100	83.395	ENSIPUG00000017147	cpsf4	100	84.871	Ictalurus_punctatus
ENSFHEG00000010880	cpsf4	100	83.333	ENSSTOG00000001688	CPSF4	100	83.333	Ictidomys_tridecemlineatus
ENSFHEG00000010880	cpsf4	100	82.963	ENSJJAG00000019426	Cpsf4	100	82.963	Jaculus_jaculus
ENSFHEG00000010880	cpsf4	100	90.566	ENSKMAG00000015642	cpsf4	100	90.566	Kryptolebias_marmoratus
ENSFHEG00000010880	cpsf4	100	59.398	ENSLACG00000018470	-	100	59.398	Latimeria_chalumnae
ENSFHEG00000010880	cpsf4	100	82.657	ENSLACG00000010938	CPSF4	100	82.657	Latimeria_chalumnae
ENSFHEG00000010880	cpsf4	100	82.900	ENSLOCG00000004814	cpsf4	100	82.900	Lepisosteus_oculatus
ENSFHEG00000010880	cpsf4	100	82.963	ENSLAFG00000000159	CPSF4	100	82.963	Loxodonta_africana
ENSFHEG00000010880	cpsf4	100	82.963	ENSMFAG00000001462	CPSF4	100	82.963	Macaca_fascicularis
ENSFHEG00000010880	cpsf4	100	82.963	ENSMMUG00000019191	CPSF4	100	82.963	Macaca_mulatta
ENSFHEG00000010880	cpsf4	100	82.963	ENSMNEG00000032306	CPSF4	100	82.963	Macaca_nemestrina
ENSFHEG00000010880	cpsf4	100	82.963	ENSMLEG00000034721	CPSF4	100	82.963	Mandrillus_leucophaeus
ENSFHEG00000010880	cpsf4	100	91.353	ENSMAMG00000006244	cpsf4	100	91.353	Mastacembelus_armatus
ENSFHEG00000010880	cpsf4	100	90.566	ENSMZEG00005007515	cpsf4	100	90.566	Maylandia_zebra
ENSFHEG00000010880	cpsf4	87	77.922	ENSMGAG00000004235	CPSF4	100	77.922	Meleagris_gallopavo
ENSFHEG00000010880	cpsf4	100	83.333	ENSMAUG00000021253	Cpsf4	100	83.333	Mesocricetus_auratus
ENSFHEG00000010880	cpsf4	100	82.963	ENSMICG00000017429	CPSF4	100	82.963	Microcebus_murinus
ENSFHEG00000010880	cpsf4	100	83.333	ENSMOCG00000014901	Cpsf4	100	83.333	Microtus_ochrogaster
ENSFHEG00000010880	cpsf4	100	90.226	ENSMMOG00000001813	cpsf4	100	90.226	Mola_mola
ENSFHEG00000010880	cpsf4	100	83.333	ENSMODG00000001367	CPSF4	100	83.333	Monodelphis_domestica
ENSFHEG00000010880	cpsf4	100	89.474	ENSMALG00000012611	cpsf4	100	89.474	Monopterus_albus
ENSFHEG00000010880	cpsf4	100	83.333	MGP_CAROLIEiJ_G0028012	Cpsf4	100	83.333	Mus_caroli
ENSFHEG00000010880	cpsf4	100	83.333	ENSMUSG00000029625	Cpsf4	100	83.333	Mus_musculus
ENSFHEG00000010880	cpsf4	100	83.333	MGP_PahariEiJ_G0024581	Cpsf4	100	83.333	Mus_pahari
ENSFHEG00000010880	cpsf4	100	82.963	MGP_SPRETEiJ_G0029013	Cpsf4	100	82.963	Mus_spretus
ENSFHEG00000010880	cpsf4	100	83.333	ENSMPUG00000016508	CPSF4	100	83.333	Mustela_putorius_furo
ENSFHEG00000010880	cpsf4	87	77.922	ENSMLUG00000010980	CPSF4	100	77.922	Myotis_lucifugus
ENSFHEG00000010880	cpsf4	100	83.333	ENSNGAG00000001567	Cpsf4	100	83.333	Nannospalax_galili
ENSFHEG00000010880	cpsf4	91	90.456	ENSNBRG00000003943	cpsf4	98	90.456	Neolamprologus_brichardi
ENSFHEG00000010880	cpsf4	100	81.203	ENSNLEG00000011074	CPSF4	100	81.203	Nomascus_leucogenys
ENSFHEG00000010880	cpsf4	100	83.333	ENSMEUG00000006955	CPSF4	100	83.333	Notamacropus_eugenii
ENSFHEG00000010880	cpsf4	100	82.593	ENSOPRG00000013663	CPSF4	100	82.593	Ochotona_princeps
ENSFHEG00000010880	cpsf4	100	83.333	ENSODEG00000011181	-	100	83.333	Octodon_degus
ENSFHEG00000010880	cpsf4	100	64.576	ENSODEG00000009779	-	100	64.576	Octodon_degus
ENSFHEG00000010880	cpsf4	98	67.816	ENSODEG00000018283	-	91	67.816	Octodon_degus
ENSFHEG00000010880	cpsf4	100	90.189	ENSONIG00000008495	cpsf4	100	90.189	Oreochromis_niloticus
ENSFHEG00000010880	cpsf4	100	53.047	ENSOANG00000009568	-	100	53.047	Ornithorhynchus_anatinus
ENSFHEG00000010880	cpsf4	87	81.702	ENSOANG00000007729	CPSF4	100	81.702	Ornithorhynchus_anatinus
ENSFHEG00000010880	cpsf4	100	82.593	ENSOCUG00000002437	CPSF4	70	82.593	Oryctolagus_cuniculus
ENSFHEG00000010880	cpsf4	100	91.698	ENSORLG00000022798	cpsf4	100	91.698	Oryzias_latipes
ENSFHEG00000010880	cpsf4	100	91.698	ENSORLG00020008548	cpsf4	100	91.698	Oryzias_latipes_hni
ENSFHEG00000010880	cpsf4	100	91.321	ENSORLG00015019575	cpsf4	100	91.321	Oryzias_latipes_hsok
ENSFHEG00000010880	cpsf4	100	90.943	ENSOMEG00000005176	cpsf4	100	90.943	Oryzias_melastigma
ENSFHEG00000010880	cpsf4	100	82.963	ENSOGAG00000010884	CPSF4	100	82.963	Otolemur_garnettii
ENSFHEG00000010880	cpsf4	100	72.161	ENSOARG00000018668	CPSF4	100	72.161	Ovis_aries
ENSFHEG00000010880	cpsf4	100	83.333	ENSPPAG00000043355	CPSF4	100	83.333	Pan_paniscus
ENSFHEG00000010880	cpsf4	100	83.333	ENSPPRG00000003134	CPSF4	100	83.333	Panthera_pardus
ENSFHEG00000010880	cpsf4	90	82.305	ENSPTIG00000005604	CPSF4	90	82.305	Panthera_tigris_altaica
ENSFHEG00000010880	cpsf4	100	83.333	ENSPTRG00000019453	CPSF4	100	83.333	Pan_troglodytes
ENSFHEG00000010880	cpsf4	100	82.963	ENSPANG00000023123	CPSF4	100	82.963	Papio_anubis
ENSFHEG00000010880	cpsf4	100	81.022	ENSPKIG00000014278	cpsf4	100	81.022	Paramormyrops_kingsleyae
ENSFHEG00000010880	cpsf4	81	59.535	ENSPSIG00000018198	-	100	59.535	Pelodiscus_sinensis
ENSFHEG00000010880	cpsf4	80	81.567	ENSPSIG00000011229	CPSF4	100	81.567	Pelodiscus_sinensis
ENSFHEG00000010880	cpsf4	100	78.113	ENSPMGG00000017735	cpsf4	100	78.113	Periophthalmus_magnuspinnatus
ENSFHEG00000010880	cpsf4	100	83.333	ENSPEMG00000004508	Cpsf4	100	83.333	Peromyscus_maniculatus_bairdii
ENSFHEG00000010880	cpsf4	100	83.333	ENSPCIG00000024776	CPSF4	100	83.333	Phascolarctos_cinereus
ENSFHEG00000010880	cpsf4	100	96.226	ENSPFOG00000014912	cpsf4	100	96.226	Poecilia_formosa
ENSFHEG00000010880	cpsf4	100	87.170	ENSPLAG00000009599	cpsf4	100	87.170	Poecilia_latipinna
ENSFHEG00000010880	cpsf4	100	96.226	ENSPMEG00000009790	cpsf4	100	96.226	Poecilia_mexicana
ENSFHEG00000010880	cpsf4	100	95.472	ENSPREG00000018166	cpsf4	100	95.472	Poecilia_reticulata
ENSFHEG00000010880	cpsf4	87	81.702	ENSPPYG00000017378	CPSF4	100	81.702	Pongo_abelii
ENSFHEG00000010880	cpsf4	100	82.963	ENSPCAG00000001892	CPSF4	100	82.963	Procavia_capensis
ENSFHEG00000010880	cpsf4	100	83.333	ENSPCOG00000012771	CPSF4	100	83.333	Propithecus_coquereli
ENSFHEG00000010880	cpsf4	100	78.519	ENSPVAG00000007531	CPSF4	100	78.519	Pteropus_vampyrus
ENSFHEG00000010880	cpsf4	100	90.566	ENSPNYG00000018559	cpsf4	100	90.566	Pundamilia_nyererei
ENSFHEG00000010880	cpsf4	100	85.185	ENSPNAG00000003736	cpsf4	100	85.185	Pygocentrus_nattereri
ENSFHEG00000010880	cpsf4	100	80.377	ENSRNOG00000000985	Cpsf4	100	80.377	Rattus_norvegicus
ENSFHEG00000010880	cpsf4	87	81.702	ENSRBIG00000033886	CPSF4	100	81.702	Rhinopithecus_bieti
ENSFHEG00000010880	cpsf4	100	80.000	ENSRROG00000040431	CPSF4	100	80.000	Rhinopithecus_roxellana
ENSFHEG00000010880	cpsf4	100	82.963	ENSSBOG00000020493	CPSF4	100	82.963	Saimiri_boliviensis_boliviensis
ENSFHEG00000010880	cpsf4	100	83.333	ENSSHAG00000011533	CPSF4	100	83.333	Sarcophilus_harrisii
ENSFHEG00000010880	cpsf4	100	81.522	ENSSFOG00015007883	cpsf4	100	81.071	Scleropages_formosus
ENSFHEG00000010880	cpsf4	100	83.083	ENSSMAG00000006374	cpsf4	100	83.083	Scophthalmus_maximus
ENSFHEG00000010880	cpsf4	100	91.353	ENSSDUG00000018887	cpsf4	100	91.353	Seriola_dumerili
ENSFHEG00000010880	cpsf4	100	91.729	ENSSLDG00000019078	cpsf4	100	91.729	Seriola_lalandi_dorsalis
ENSFHEG00000010880	cpsf4	87	81.702	ENSSARG00000012416	CPSF4	100	81.702	Sorex_araneus
ENSFHEG00000010880	cpsf4	97	59.375	ENSSPUG00000014803	-	98	59.375	Sphenodon_punctatus
ENSFHEG00000010880	cpsf4	100	81.852	ENSSPUG00000003549	CPSF4	100	81.852	Sphenodon_punctatus
ENSFHEG00000010880	cpsf4	100	84.151	ENSSPAG00000006174	cpsf4	100	84.151	Stegastes_partitus
ENSFHEG00000010880	cpsf4	100	80.000	ENSSSCG00000026896	CPSF4	100	80.000	Sus_scrofa
ENSFHEG00000010880	cpsf4	100	78.277	ENSTGUG00000007552	CPSF4	100	78.277	Taeniopygia_guttata
ENSFHEG00000010880	cpsf4	100	87.547	ENSTRUG00000024220	cpsf4	100	87.547	Takifugu_rubripes
ENSFHEG00000010880	cpsf4	100	88.679	ENSTNIG00000006265	cpsf4	100	88.679	Tetraodon_nigroviridis
ENSFHEG00000010880	cpsf4	87	72.766	ENSTBEG00000011406	CPSF4	100	72.766	Tupaia_belangeri
ENSFHEG00000010880	cpsf4	100	69.517	ENSTTRG00000003007	CPSF4	100	72.491	Tursiops_truncatus
ENSFHEG00000010880	cpsf4	92	79.424	ENSUAMG00000008051	CPSF4	85	79.424	Ursus_americanus
ENSFHEG00000010880	cpsf4	100	80.377	ENSUMAG00000009474	CPSF4	100	80.377	Ursus_maritimus
ENSFHEG00000010880	cpsf4	100	80.377	ENSVVUG00000008824	CPSF4	100	80.377	Vulpes_vulpes
ENSFHEG00000010880	cpsf4	99	60.370	ENSXETG00000004641	cpsf4l	99	60.370	Xenopus_tropicalis
ENSFHEG00000010880	cpsf4	100	77.778	ENSXETG00000009892	cpsf4	100	78.214	Xenopus_tropicalis
ENSFHEG00000010880	cpsf4	100	95.849	ENSXCOG00000016040	cpsf4	100	95.849	Xiphophorus_couchianus
ENSFHEG00000010880	cpsf4	100	96.226	ENSXMAG00000024670	cpsf4	100	96.226	Xiphophorus_maculatus