EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000011073 (Gene tree)
Gene ID: 105920029
Gene Symbol: smg7
Alias: fa99h10|wu:fa99h10
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 20146 bases
Position: chrKN806010.1:31294-51439
Accession: 105920029
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000027538	EST1	PF10374.9	1.3e-24	1	1
ENSFHEP00000027538	EST1_DNA_bind	PF10373.9	5.4e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000016336	-	5862	XM_012855521	ENSFHEP00000027538	1135 (aa)	XP_012710975	UPI000644E87E

Gene Model

Click here to download ENSFHEG00000011073's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000011073's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000011073	smg7	99	63.884	ENSG00000116698	SMG7	88	90.062	Homo_sapiens
ENSFHEG00000011073	smg7	90	86.667	ENSAPOG00000009611	smg7	96	86.667	Acanthochromis_polyacanthus
ENSFHEG00000011073	smg7	99	64.003	ENSAMEG00000002357	SMG7	99	63.746	Ailuropoda_melanoleuca
ENSFHEG00000011073	smg7	97	79.028	ENSACIG00000015152	smg7	100	79.372	Amphilophus_citrinellus
ENSFHEG00000011073	smg7	100	84.489	ENSAOCG00000013538	smg7	100	84.875	Amphiprion_ocellaris
ENSFHEG00000011073	smg7	100	84.329	ENSAPEG00000007851	smg7	100	84.715	Amphiprion_percula
ENSFHEG00000011073	smg7	100	83.405	ENSATEG00000006931	smg7	100	84.183	Anabas_testudineus
ENSFHEG00000011073	smg7	99	64.378	ENSAPLG00000015811	SMG7	99	63.777	Anas_platyrhynchos
ENSFHEG00000011073	smg7	99	62.026	ENSACAG00000014989	SMG7	75	64.091	Anolis_carolinensis
ENSFHEG00000011073	smg7	99	63.939	ENSANAG00000028114	SMG7	85	89.809	Aotus_nancymaae
ENSFHEG00000011073	smg7	100	82.220	ENSACLG00000022079	smg7	100	82.419	Astatotilapia_calliptera
ENSFHEG00000011073	smg7	100	73.287	ENSAMXG00000020809	smg7	100	73.247	Astyanax_mexicanus
ENSFHEG00000011073	smg7	99	64.524	ENSBTAG00000008003	SMG7	99	64.524	Bos_taurus
ENSFHEG00000011073	smg7	99	64.024	ENSCJAG00000005135	SMG7	86	89.809	Callithrix_jacchus
ENSFHEG00000011073	smg7	99	60.265	ENSCAFG00000013276	SMG7	97	59.983	Canis_familiaris
ENSFHEG00000011073	smg7	99	63.908	ENSCAFG00020015475	SMG7	89	87.195	Canis_lupus_dingo
ENSFHEG00000011073	smg7	100	60.744	ENSCHIG00000018192	SMG7	99	60.859	Capra_hircus
ENSFHEG00000011073	smg7	99	63.969	ENSTSYG00000002667	SMG7	80	90.968	Carlito_syrichta
ENSFHEG00000011073	smg7	99	60.430	ENSCPOG00000008906	SMG7	99	59.567	Cavia_porcellus
ENSFHEG00000011073	smg7	99	64.109	ENSCCAG00000028596	SMG7	85	89.809	Cebus_capucinus
ENSFHEG00000011073	smg7	99	64.140	ENSCATG00000011063	SMG7	85	89.809	Cercocebus_atys
ENSFHEG00000011073	smg7	99	63.891	ENSCLAG00000010751	SMG7	99	64.469	Chinchilla_lanigera
ENSFHEG00000011073	smg7	99	60.576	ENSCSAG00000012654	SMG7	97	60.996	Chlorocebus_sabaeus
ENSFHEG00000011073	smg7	92	55.417	ENSCHOG00000010522	SMG7	87	61.364	Choloepus_hoffmanni
ENSFHEG00000011073	smg7	99	65.841	ENSCPBG00000015724	SMG7	99	65.266	Chrysemys_picta_bellii
ENSFHEG00000011073	smg7	99	63.932	ENSCANG00000015680	SMG7	85	89.809	Colobus_angolensis_palliatus
ENSFHEG00000011073	smg7	99	63.413	ENSCGRG00001013705	Smg7	99	63.955	Cricetulus_griseus_chok1gshd
ENSFHEG00000011073	smg7	99	63.257	ENSCGRG00000018401	Smg7	100	63.801	Cricetulus_griseus_crigri
ENSFHEG00000011073	smg7	99	89.683	ENSCVAG00000011842	smg7	100	89.771	Cyprinodon_variegatus
ENSFHEG00000011073	smg7	100	73.611	ENSDARG00000060767	smg7	100	73.917	Danio_rerio
ENSFHEG00000011073	smg7	99	60.000	ENSDORG00000007331	Smg7	99	60.531	Dipodomys_ordii
ENSFHEG00000011073	smg7	96	59.966	ENSETEG00000002654	SMG7	99	59.760	Echinops_telfairi
ENSFHEG00000011073	smg7	99	60.741	ENSEASG00005006524	SMG7	99	61.328	Equus_asinus_asinus
ENSFHEG00000011073	smg7	93	84.570	ENSECAG00000004313	SMG7	97	84.366	Equus_caballus
ENSFHEG00000011073	smg7	96	59.829	ENSEEUG00000002024	SMG7	94	59.281	Erinaceus_europaeus
ENSFHEG00000011073	smg7	100	72.832	ENSELUG00000010293	smg7	99	75.267	Esox_lucius
ENSFHEG00000011073	smg7	99	62.661	ENSFCAG00000010900	SMG7	99	61.691	Felis_catus
ENSFHEG00000011073	smg7	99	59.866	ENSFALG00000003047	SMG7	100	60.873	Ficedula_albicollis
ENSFHEG00000011073	smg7	99	61.097	ENSFDAG00000012121	SMG7	99	60.202	Fukomys_damarensis
ENSFHEG00000011073	smg7	82	79.775	ENSGMOG00000004916	smg7	91	79.775	Gadus_morhua
ENSFHEG00000011073	smg7	99	64.010	ENSGALG00000004667	SMG7	99	64.072	Gallus_gallus
ENSFHEG00000011073	smg7	100	87.927	ENSGAFG00000019000	smg7	100	87.927	Gambusia_affinis
ENSFHEG00000011073	smg7	98	79.839	ENSGACG00000001634	smg7	99	79.215	Gasterosteus_aculeatus
ENSFHEG00000011073	smg7	99	64.055	ENSGGOG00000002342	SMG7	82	88.750	Gorilla_gorilla
ENSFHEG00000011073	smg7	98	81.239	ENSHBUG00000003726	smg7	99	81.228	Haplochromis_burtoni
ENSFHEG00000011073	smg7	99	65.325	ENSHGLG00000009353	SMG7	99	64.812	Heterocephalus_glaber_female
ENSFHEG00000011073	smg7	99	65.240	ENSHGLG00100009637	-	99	64.610	Heterocephalus_glaber_male
ENSFHEG00000011073	smg7	99	56.100	ENSHGLG00100004878	-	99	55.993	Heterocephalus_glaber_male
ENSFHEG00000011073	smg7	100	73.060	ENSIPUG00000016997	smg7	100	72.799	Ictalurus_punctatus
ENSFHEG00000011073	smg7	99	63.543	ENSSTOG00000000401	SMG7	99	62.995	Ictidomys_tridecemlineatus
ENSFHEG00000011073	smg7	99	61.526	ENSJJAG00000012351	Smg7	99	61.526	Jaculus_jaculus
ENSFHEG00000011073	smg7	97	80.304	ENSKMAG00000004900	smg7	100	80.573	Kryptolebias_marmoratus
ENSFHEG00000011073	smg7	62	63.687	ENSLBEG00000005220	-	75	73.000	Labrus_bergylta
ENSFHEG00000011073	smg7	99	82.049	ENSLBEG00000002983	smg7	99	82.765	Labrus_bergylta
ENSFHEG00000011073	smg7	99	65.789	ENSLACG00000000972	SMG7	99	65.506	Latimeria_chalumnae
ENSFHEG00000011073	smg7	99	66.474	ENSLOCG00000002010	smg7	99	66.227	Lepisosteus_oculatus
ENSFHEG00000011073	smg7	99	60.679	ENSLAFG00000008186	SMG7	99	60.684	Loxodonta_africana
ENSFHEG00000011073	smg7	99	62.543	ENSMFAG00000031653	SMG7	85	89.809	Macaca_fascicularis
ENSFHEG00000011073	smg7	99	63.365	ENSMMUG00000018458	SMG7	99	63.824	Macaca_mulatta
ENSFHEG00000011073	smg7	99	64.140	ENSMNEG00000034798	SMG7	85	89.809	Macaca_nemestrina
ENSFHEG00000011073	smg7	99	64.140	ENSMLEG00000037170	SMG7	99	64.777	Mandrillus_leucophaeus
ENSFHEG00000011073	smg7	88	81.145	ENSMAMG00000018733	smg7	85	81.836	Mastacembelus_armatus
ENSFHEG00000011073	smg7	100	82.480	ENSMZEG00005015247	smg7	100	82.078	Maylandia_zebra
ENSFHEG00000011073	smg7	99	63.417	ENSMGAG00000001561	SMG7	99	63.652	Meleagris_gallopavo
ENSFHEG00000011073	smg7	99	63.551	ENSMAUG00000019484	Smg7	99	64.096	Mesocricetus_auratus
ENSFHEG00000011073	smg7	99	64.486	ENSMICG00000007145	SMG7	82	89.809	Microcebus_murinus
ENSFHEG00000011073	smg7	99	63.683	ENSMOCG00000020748	Smg7	99	63.410	Microtus_ochrogaster
ENSFHEG00000011073	smg7	99	79.581	ENSMMOG00000001524	smg7	99	80.105	Mola_mola
ENSFHEG00000011073	smg7	92	64.558	ENSMODG00000007139	SMG7	99	64.179	Monodelphis_domestica
ENSFHEG00000011073	smg7	100	83.348	ENSMALG00000000061	smg7	93	83.174	Monopterus_albus
ENSFHEG00000011073	smg7	99	64.696	MGP_CAROLIEiJ_G0014704	Smg7	99	64.151	Mus_caroli
ENSFHEG00000011073	smg7	99	63.551	ENSMUSG00000042772	Smg7	99	64.096	Mus_musculus
ENSFHEG00000011073	smg7	99	63.636	MGP_PahariEiJ_G0027940	Smg7	99	64.182	Mus_pahari
ENSFHEG00000011073	smg7	99	63.636	MGP_SPRETEiJ_G0015511	Smg7	99	64.182	Mus_spretus
ENSFHEG00000011073	smg7	98	60.269	ENSMPUG00000011732	SMG7	97	59.815	Mustela_putorius_furo
ENSFHEG00000011073	smg7	99	60.149	ENSMLUG00000015417	SMG7	99	60.732	Myotis_lucifugus
ENSFHEG00000011073	smg7	100	63.706	ENSNGAG00000009836	Smg7	100	63.194	Nannospalax_galili
ENSFHEG00000011073	smg7	98	76.035	ENSNBRG00000024343	smg7	99	75.841	Neolamprologus_brichardi
ENSFHEG00000011073	smg7	99	64.055	ENSNLEG00000018018	SMG7	99	64.691	Nomascus_leucogenys
ENSFHEG00000011073	smg7	70	64.773	ENSMEUG00000004681	SMG7	73	64.773	Notamacropus_eugenii
ENSFHEG00000011073	smg7	96	57.131	ENSOPRG00000013942	SMG7	96	57.304	Ochotona_princeps
ENSFHEG00000011073	smg7	99	64.726	ENSODEG00000010390	SMG7	99	64.267	Octodon_degus
ENSFHEG00000011073	smg7	100	82.480	ENSONIG00000000277	smg7	100	82.594	Oreochromis_niloticus
ENSFHEG00000011073	smg7	99	59.734	ENSOANG00000000994	SMG7	100	59.631	Ornithorhynchus_anatinus
ENSFHEG00000011073	smg7	99	58.553	ENSOCUG00000005887	SMG7	93	59.155	Oryctolagus_cuniculus
ENSFHEG00000011073	smg7	100	79.283	ENSORLG00000007314	smg7	100	79.720	Oryzias_latipes
ENSFHEG00000011073	smg7	100	79.458	ENSORLG00020015779	smg7	100	79.895	Oryzias_latipes_hni
ENSFHEG00000011073	smg7	100	79.633	ENSORLG00015012289	smg7	100	79.808	Oryzias_latipes_hsok
ENSFHEG00000011073	smg7	100	76.697	ENSOMEG00000002328	smg7	100	77.117	Oryzias_melastigma
ENSFHEG00000011073	smg7	96	59.386	ENSOGAG00000003107	SMG7	93	59.056	Otolemur_garnettii
ENSFHEG00000011073	smg7	99	63.185	ENSOARG00000001352	SMG7	100	63.304	Ovis_aries
ENSFHEG00000011073	smg7	99	64.055	ENSPPAG00000031619	SMG7	90	86.667	Pan_paniscus
ENSFHEG00000011073	smg7	99	64.524	ENSPPRG00000011222	SMG7	99	63.979	Panthera_pardus
ENSFHEG00000011073	smg7	96	61.381	ENSPTIG00000007242	SMG7	100	60.836	Panthera_tigris_altaica
ENSFHEG00000011073	smg7	99	64.055	ENSPTRG00000001764	SMG7	85	89.809	Pan_troglodytes
ENSFHEG00000011073	smg7	99	64.140	ENSPANG00000004520	SMG7	99	64.777	Papio_anubis
ENSFHEG00000011073	smg7	99	66.930	ENSPKIG00000007242	smg7	99	67.075	Paramormyrops_kingsleyae
ENSFHEG00000011073	smg7	99	65.217	ENSPSIG00000012201	SMG7	100	64.957	Pelodiscus_sinensis
ENSFHEG00000011073	smg7	71	48.492	ENSPMGG00000021833	smg7	97	48.144	Periophthalmus_magnuspinnatus
ENSFHEG00000011073	smg7	99	63.841	ENSPEMG00000011315	Smg7	99	63.668	Peromyscus_maniculatus_bairdii
ENSFHEG00000011073	smg7	99	65.039	ENSPCIG00000003786	SMG7	89	90.625	Phascolarctos_cinereus
ENSFHEG00000011073	smg7	100	85.894	ENSPFOG00000019219	smg7	100	85.894	Poecilia_formosa
ENSFHEG00000011073	smg7	100	89.667	ENSPLAG00000001446	smg7	100	89.667	Poecilia_latipinna
ENSFHEG00000011073	smg7	97	89.502	ENSPMEG00000005218	smg7	99	89.502	Poecilia_mexicana
ENSFHEG00000011073	smg7	87	84.337	ENSPREG00000019039	smg7	91	84.438	Poecilia_reticulata
ENSFHEG00000011073	smg7	99	64.055	ENSPPYG00000000427	SMG7	99	64.691	Pongo_abelii
ENSFHEG00000011073	smg7	83	69.130	ENSPCAG00000008360	SMG7	86	69.130	Procavia_capensis
ENSFHEG00000011073	smg7	99	63.140	ENSPCOG00000011996	SMG7	77	89.809	Propithecus_coquereli
ENSFHEG00000011073	smg7	91	56.577	ENSPVAG00000000851	SMG7	89	56.636	Pteropus_vampyrus
ENSFHEG00000011073	smg7	100	82.726	ENSPNYG00000007643	smg7	100	82.548	Pundamilia_nyererei
ENSFHEG00000011073	smg7	100	73.253	ENSPNAG00000011374	smg7	100	73.730	Pygocentrus_nattereri
ENSFHEG00000011073	smg7	99	63.582	ENSRNOG00000027962	Smg7	99	64.576	Rattus_norvegicus
ENSFHEG00000011073	smg7	99	63.969	ENSRBIG00000036316	SMG7	99	64.605	Rhinopithecus_bieti
ENSFHEG00000011073	smg7	99	63.969	ENSRROG00000035719	SMG7	99	64.605	Rhinopithecus_roxellana
ENSFHEG00000011073	smg7	99	62.500	ENSSBOG00000023454	SMG7	88	90.062	Saimiri_boliviensis_boliviensis
ENSFHEG00000011073	smg7	99	64.585	ENSSHAG00000013147	SMG7	99	64.494	Sarcophilus_harrisii
ENSFHEG00000011073	smg7	100	71.404	ENSSFOG00015017252	smg7	100	71.577	Scleropages_formosus
ENSFHEG00000011073	smg7	100	81.381	ENSSMAG00000006067	smg7	100	81.588	Scophthalmus_maximus
ENSFHEG00000011073	smg7	64	87.912	ENSSDUG00000017543	smg7	100	84.841	Seriola_dumerili
ENSFHEG00000011073	smg7	99	64.177	ENSSPUG00000002064	SMG7	99	64.696	Sphenodon_punctatus
ENSFHEG00000011073	smg7	99	81.152	ENSSPAG00000008733	smg7	99	81.239	Stegastes_partitus
ENSFHEG00000011073	smg7	99	62.789	ENSSSCG00000015558	SMG7	99	63.417	Sus_scrofa
ENSFHEG00000011073	smg7	99	64.052	ENSTGUG00000003928	SMG7	100	64.286	Taeniopygia_guttata
ENSFHEG00000011073	smg7	100	68.858	ENSTNIG00000002802	smg7	100	68.734	Tetraodon_nigroviridis
ENSFHEG00000011073	smg7	77	65.143	ENSTBEG00000003220	SMG7	69	65.143	Tupaia_belangeri
ENSFHEG00000011073	smg7	96	59.370	ENSTTRG00000014778	SMG7	94	60.121	Tursiops_truncatus
ENSFHEG00000011073	smg7	96	61.956	ENSUAMG00000017473	SMG7	100	61.566	Ursus_americanus
ENSFHEG00000011073	smg7	96	61.956	ENSUMAG00000016389	SMG7	100	61.566	Ursus_maritimus
ENSFHEG00000011073	smg7	99	62.995	ENSVVUG00000008976	SMG7	99	62.532	Vulpes_vulpes
ENSFHEG00000011073	smg7	99	59.645	ENSXETG00000012528	smg7	99	59.372	Xenopus_tropicalis
ENSFHEG00000011073	smg7	100	88.967	ENSXMAG00000007123	smg7	100	88.792	Xiphophorus_maculatus