EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000011228 (Gene tree)
Gene ID: 105932128
Gene Symbol: rcl1
Alias: zgc:109921
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 17530 bases
Position: chrKN811382.1:997869-1015398
Accession: 105932128
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000027629	RTC	PF01137.21	3.1e-59	1	1
ENSFHEP00000009964	RTC	PF01137.21	4.4e-59	1	1
ENSFHEP00000027638	RTC	PF01137.21	7.1e-43	1	1
ENSFHEP00000027638	RTC_insert	PF05189.13	2.2e-36	1	1
ENSFHEP00000027629	RTC_insert	PF05189.13	2.3e-36	1	1
ENSFHEP00000009964	RTC_insert	PF05189.13	2.4e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000016546	-	3948	-	ENSFHEP00000027638	364 (aa)	-	-
ENSFHET00000016553	-	4095	-	ENSFHEP00000009964	413 (aa)	-	-
ENSFHET00000016524	-	4172	XM_012871130	ENSFHEP00000027629	372 (aa)	XP_012726584	UPI000644D439

Gene Model

Click here to download ENSFHEG00000011228's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000011228's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000011228	rcl1	99	80.000	ENSG00000120158	RCL1	100	82.407	Homo_sapiens
ENSFHEG00000011228	rcl1	100	91.398	ENSAPOG00000015666	rcl1	100	91.398	Acanthochromis_polyacanthus
ENSFHEG00000011228	rcl1	99	81.081	ENSAMEG00000002631	RCL1	99	81.081	Ailuropoda_melanoleuca
ENSFHEG00000011228	rcl1	100	90.860	ENSACIG00000021195	rcl1	100	90.860	Amphilophus_citrinellus
ENSFHEG00000011228	rcl1	100	90.860	ENSAOCG00000002223	rcl1	100	90.860	Amphiprion_ocellaris
ENSFHEG00000011228	rcl1	100	91.398	ENSAPEG00000006905	rcl1	100	91.398	Amphiprion_percula
ENSFHEG00000011228	rcl1	100	88.978	ENSATEG00000020026	rcl1	100	88.978	Anabas_testudineus
ENSFHEG00000011228	rcl1	90	77.812	ENSAPLG00000006031	RCL1	100	77.812	Anas_platyrhynchos
ENSFHEG00000011228	rcl1	99	75.135	ENSACAG00000003640	RCL1	99	75.135	Anolis_carolinensis
ENSFHEG00000011228	rcl1	99	79.459	ENSANAG00000037372	RCL1	99	79.459	Aotus_nancymaae
ENSFHEG00000011228	rcl1	100	90.860	ENSACLG00000021724	rcl1	100	90.860	Astatotilapia_calliptera
ENSFHEG00000011228	rcl1	99	81.793	ENSAMXG00000033394	rcl1	99	81.793	Astyanax_mexicanus
ENSFHEG00000011228	rcl1	99	46.032	WBGene00022852	ZK1127.5	99	46.032	Caenorhabditis_elegans
ENSFHEG00000011228	rcl1	99	79.730	ENSCJAG00000011202	RCL1	99	79.730	Callithrix_jacchus
ENSFHEG00000011228	rcl1	99	80.811	ENSCAFG00000002091	RCL1	99	80.811	Canis_familiaris
ENSFHEG00000011228	rcl1	99	80.811	ENSCAFG00020000638	RCL1	77	80.811	Canis_lupus_dingo
ENSFHEG00000011228	rcl1	99	79.730	ENSCHIG00000012407	RCL1	99	79.730	Capra_hircus
ENSFHEG00000011228	rcl1	90	81.707	ENSTSYG00000009592	RCL1	97	83.516	Carlito_syrichta
ENSFHEG00000011228	rcl1	68	69.136	ENSCAPG00000013575	RCL1	100	69.136	Cavia_aperea
ENSFHEG00000011228	rcl1	99	79.459	ENSCPOG00000015354	RCL1	99	79.459	Cavia_porcellus
ENSFHEG00000011228	rcl1	99	79.730	ENSCCAG00000033505	RCL1	97	81.967	Cebus_capucinus
ENSFHEG00000011228	rcl1	99	79.730	ENSCATG00000034721	RCL1	97	82.418	Cercocebus_atys
ENSFHEG00000011228	rcl1	99	80.000	ENSCLAG00000007445	RCL1	99	80.000	Chinchilla_lanigera
ENSFHEG00000011228	rcl1	99	79.730	ENSCSAG00000008811	RCL1	99	79.730	Chlorocebus_sabaeus
ENSFHEG00000011228	rcl1	86	69.592	ENSCHOG00000007216	RCL1	99	69.592	Choloepus_hoffmanni
ENSFHEG00000011228	rcl1	100	77.005	ENSCPBG00000025481	RCL1	99	75.942	Chrysemys_picta_bellii
ENSFHEG00000011228	rcl1	99	60.541	ENSCING00000019565	-	99	60.000	Ciona_intestinalis
ENSFHEG00000011228	rcl1	99	79.730	ENSCANG00000027099	RCL1	99	79.730	Colobus_angolensis_palliatus
ENSFHEG00000011228	rcl1	99	80.541	ENSCGRG00001013748	Rcl1	99	80.541	Cricetulus_griseus_chok1gshd
ENSFHEG00000011228	rcl1	90	81.763	ENSCGRG00000005843	Rcl1	99	81.763	Cricetulus_griseus_crigri
ENSFHEG00000011228	rcl1	100	88.978	ENSCSEG00000000712	rcl1	99	88.889	Cynoglossus_semilaevis
ENSFHEG00000011228	rcl1	100	94.624	ENSCVAG00000011536	rcl1	100	94.624	Cyprinodon_variegatus
ENSFHEG00000011228	rcl1	99	80.381	ENSDARG00000038312	rcl1	100	80.381	Danio_rerio
ENSFHEG00000011228	rcl1	73	80.451	ENSDNOG00000019911	RCL1	100	81.944	Dasypus_novemcinctus
ENSFHEG00000011228	rcl1	99	80.270	ENSDORG00000015645	Rcl1	99	80.270	Dipodomys_ordii
ENSFHEG00000011228	rcl1	98	53.619	FBgn0020909	Rtc1	97	54.424	Drosophila_melanogaster
ENSFHEG00000011228	rcl1	90	55.793	ENSETEG00000014087	-	100	55.793	Echinops_telfairi
ENSFHEG00000011228	rcl1	100	55.764	ENSEBUG00000016621	-	99	55.764	Eptatretus_burgeri
ENSFHEG00000011228	rcl1	99	79.730	ENSEASG00005010653	RCL1	99	79.730	Equus_asinus_asinus
ENSFHEG00000011228	rcl1	99	79.730	ENSECAG00000015973	RCL1	99	79.730	Equus_caballus
ENSFHEG00000011228	rcl1	99	67.838	ENSEEUG00000009801	RCL1	99	67.838	Erinaceus_europaeus
ENSFHEG00000011228	rcl1	100	80.645	ENSELUG00000007353	rcl1	100	80.645	Esox_lucius
ENSFHEG00000011228	rcl1	99	80.000	ENSFCAG00000014557	RCL1	99	80.000	Felis_catus
ENSFHEG00000011228	rcl1	92	76.786	ENSFALG00000010553	RCL1	89	76.786	Ficedula_albicollis
ENSFHEG00000011228	rcl1	90	79.268	ENSFDAG00000004209	RCL1	100	79.268	Fukomys_damarensis
ENSFHEG00000011228	rcl1	100	82.527	ENSGMOG00000004677	rcl1	100	82.527	Gadus_morhua
ENSFHEG00000011228	rcl1	99	75.741	ENSGALG00000015024	RCL1	99	75.741	Gallus_gallus
ENSFHEG00000011228	rcl1	100	95.430	ENSGAFG00000007257	rcl1	100	95.430	Gambusia_affinis
ENSFHEG00000011228	rcl1	100	88.172	ENSGACG00000017474	rcl1	100	88.172	Gasterosteus_aculeatus
ENSFHEG00000011228	rcl1	100	76.738	ENSGAGG00000003689	RCL1	100	76.738	Gopherus_agassizii
ENSFHEG00000011228	rcl1	99	79.459	ENSGGOG00000015041	RCL1	97	81.868	Gorilla_gorilla
ENSFHEG00000011228	rcl1	100	91.129	ENSHBUG00000001393	rcl1	100	91.129	Haplochromis_burtoni
ENSFHEG00000011228	rcl1	99	66.667	ENSHGLG00000005368	-	99	66.667	Heterocephalus_glaber_female
ENSFHEG00000011228	rcl1	99	78.919	ENSHGLG00000016452	RCL1	99	78.919	Heterocephalus_glaber_female
ENSFHEG00000011228	rcl1	99	73.784	ENSHGLG00100008718	-	97	78.274	Heterocephalus_glaber_male
ENSFHEG00000011228	rcl1	99	67.480	ENSHGLG00100018010	-	99	67.480	Heterocephalus_glaber_male
ENSFHEG00000011228	rcl1	100	91.667	ENSHCOG00000020170	rcl1	100	91.667	Hippocampus_comes
ENSFHEG00000011228	rcl1	100	82.796	ENSIPUG00000018054	RCL1	100	82.796	Ictalurus_punctatus
ENSFHEG00000011228	rcl1	99	79.189	ENSSTOG00000000023	RCL1	99	79.189	Ictidomys_tridecemlineatus
ENSFHEG00000011228	rcl1	99	70.000	ENSJJAG00000015632	-	99	70.000	Jaculus_jaculus
ENSFHEG00000011228	rcl1	55	61.881	ENSJJAG00000000764	-	98	61.881	Jaculus_jaculus
ENSFHEG00000011228	rcl1	99	80.270	ENSJJAG00000022803	-	99	80.270	Jaculus_jaculus
ENSFHEG00000011228	rcl1	100	92.473	ENSKMAG00000011946	rcl1	100	92.473	Kryptolebias_marmoratus
ENSFHEG00000011228	rcl1	100	84.946	ENSLBEG00000003957	rcl1	100	84.946	Labrus_bergylta
ENSFHEG00000011228	rcl1	93	74.855	ENSLACG00000004594	RCL1	100	79.193	Latimeria_chalumnae
ENSFHEG00000011228	rcl1	100	80.914	ENSLOCG00000010148	rcl1	99	80.851	Lepisosteus_oculatus
ENSFHEG00000011228	rcl1	99	78.108	ENSLAFG00000017495	RCL1	99	78.108	Loxodonta_africana
ENSFHEG00000011228	rcl1	99	79.730	ENSMFAG00000037906	RCL1	99	79.730	Macaca_fascicularis
ENSFHEG00000011228	rcl1	99	79.730	ENSMNEG00000012288	RCL1	97	82.418	Macaca_nemestrina
ENSFHEG00000011228	rcl1	99	79.730	ENSMLEG00000043088	RCL1	99	79.730	Mandrillus_leucophaeus
ENSFHEG00000011228	rcl1	100	92.742	ENSMAMG00000008311	rcl1	100	92.742	Mastacembelus_armatus
ENSFHEG00000011228	rcl1	100	90.860	ENSMZEG00005017292	rcl1	100	90.860	Maylandia_zebra
ENSFHEG00000011228	rcl1	59	76.364	ENSMGAG00000002245	RCL1	100	76.364	Meleagris_gallopavo
ENSFHEG00000011228	rcl1	59	83.333	ENSMAUG00000008922	Rcl1	100	83.333	Mesocricetus_auratus
ENSFHEG00000011228	rcl1	99	80.217	ENSMICG00000015562	RCL1	99	80.217	Microcebus_murinus
ENSFHEG00000011228	rcl1	99	80.541	ENSMOCG00000012145	Rcl1	99	80.541	Microtus_ochrogaster
ENSFHEG00000011228	rcl1	100	87.399	ENSMMOG00000021264	rcl1	100	87.399	Mola_mola
ENSFHEG00000011228	rcl1	95	78.125	ENSMODG00000015377	RCL1	93	78.125	Monodelphis_domestica
ENSFHEG00000011228	rcl1	100	90.860	ENSMALG00000018618	rcl1	100	90.860	Monopterus_albus
ENSFHEG00000011228	rcl1	99	80.541	MGP_CAROLIEiJ_G0022853	Rcl1	99	80.541	Mus_caroli
ENSFHEG00000011228	rcl1	99	80.000	ENSMUSG00000024785	Rcl1	99	80.000	Mus_musculus
ENSFHEG00000011228	rcl1	99	80.811	MGP_PahariEiJ_G0014346	Rcl1	100	83.041	Mus_pahari
ENSFHEG00000011228	rcl1	99	80.000	MGP_SPRETEiJ_G0023771	Rcl1	100	82.456	Mus_spretus
ENSFHEG00000011228	rcl1	99	80.811	ENSMPUG00000004998	RCL1	99	80.811	Mustela_putorius_furo
ENSFHEG00000011228	rcl1	99	78.649	ENSMLUG00000009654	RCL1	99	78.649	Myotis_lucifugus
ENSFHEG00000011228	rcl1	99	80.000	ENSNGAG00000015327	Rcl1	99	80.000	Nannospalax_galili
ENSFHEG00000011228	rcl1	90	90.881	ENSNBRG00000019854	rcl1	99	84.298	Neolamprologus_brichardi
ENSFHEG00000011228	rcl1	99	77.297	ENSNLEG00000008891	RCL1	99	77.297	Nomascus_leucogenys
ENSFHEG00000011228	rcl1	99	72.703	ENSMEUG00000007653	RCL1	99	72.703	Notamacropus_eugenii
ENSFHEG00000011228	rcl1	99	78.378	ENSOPRG00000010965	RCL1	99	78.378	Ochotona_princeps
ENSFHEG00000011228	rcl1	91	67.273	ENSODEG00000004151	RCL1	96	67.477	Octodon_degus
ENSFHEG00000011228	rcl1	100	92.204	ENSONIG00000003871	rcl1	100	92.204	Oreochromis_niloticus
ENSFHEG00000011228	rcl1	68	79.116	ENSOANG00000013193	-	98	79.116	Ornithorhynchus_anatinus
ENSFHEG00000011228	rcl1	99	79.730	ENSOCUG00000008161	RCL1	99	79.730	Oryctolagus_cuniculus
ENSFHEG00000011228	rcl1	100	87.366	ENSORLG00000010443	rcl1	100	87.366	Oryzias_latipes
ENSFHEG00000011228	rcl1	100	87.634	ENSORLG00020012211	rcl1	100	87.634	Oryzias_latipes_hni
ENSFHEG00000011228	rcl1	100	87.097	ENSORLG00015001122	rcl1	100	87.097	Oryzias_latipes_hsok
ENSFHEG00000011228	rcl1	100	90.054	ENSOMEG00000022976	rcl1	94	85.390	Oryzias_melastigma
ENSFHEG00000011228	rcl1	99	79.189	ENSOGAG00000007480	RCL1	99	79.189	Otolemur_garnettii
ENSFHEG00000011228	rcl1	99	79.730	ENSOARG00000013463	RCL1	99	79.730	Ovis_aries
ENSFHEG00000011228	rcl1	99	79.730	ENSPPAG00000037958	RCL1	99	79.730	Pan_paniscus
ENSFHEG00000011228	rcl1	99	79.189	ENSPPRG00000022645	RCL1	99	79.189	Panthera_pardus
ENSFHEG00000011228	rcl1	90	80.734	ENSPTIG00000019031	RCL1	100	81.481	Panthera_tigris_altaica
ENSFHEG00000011228	rcl1	99	79.459	ENSPTRG00000020743	RCL1	97	82.418	Pan_troglodytes
ENSFHEG00000011228	rcl1	99	79.730	ENSPANG00000025151	RCL1	99	79.730	Papio_anubis
ENSFHEG00000011228	rcl1	100	81.183	ENSPKIG00000021022	rcl1	100	81.183	Paramormyrops_kingsleyae
ENSFHEG00000011228	rcl1	90	79.027	ENSPSIG00000012302	RCL1	100	79.027	Pelodiscus_sinensis
ENSFHEG00000011228	rcl1	100	90.054	ENSPMGG00000024007	rcl1	100	90.054	Periophthalmus_magnuspinnatus
ENSFHEG00000011228	rcl1	99	80.811	ENSPEMG00000023275	Rcl1	99	80.811	Peromyscus_maniculatus_bairdii
ENSFHEG00000011228	rcl1	97	30.874	ENSPMAG00000009110	rtca	96	30.874	Petromyzon_marinus
ENSFHEG00000011228	rcl1	99	79.189	ENSPCIG00000000188	RCL1	99	79.189	Phascolarctos_cinereus
ENSFHEG00000011228	rcl1	100	95.430	ENSPFOG00000019682	rcl1	100	95.467	Poecilia_formosa
ENSFHEG00000011228	rcl1	100	95.430	ENSPLAG00000022354	rcl1	100	95.430	Poecilia_latipinna
ENSFHEG00000011228	rcl1	100	95.430	ENSPMEG00000008131	rcl1	100	95.430	Poecilia_mexicana
ENSFHEG00000011228	rcl1	100	95.161	ENSPREG00000008032	rcl1	100	95.161	Poecilia_reticulata
ENSFHEG00000011228	rcl1	99	80.270	ENSPPYG00000019244	RCL1	99	80.270	Pongo_abelii
ENSFHEG00000011228	rcl1	99	73.243	ENSPCAG00000001440	RCL1	99	73.243	Procavia_capensis
ENSFHEG00000011228	rcl1	99	80.270	ENSPCOG00000009611	RCL1	97	82.967	Propithecus_coquereli
ENSFHEG00000011228	rcl1	99	79.459	ENSPVAG00000015752	RCL1	99	79.459	Pteropus_vampyrus
ENSFHEG00000011228	rcl1	100	91.129	ENSPNYG00000012910	rcl1	100	91.129	Pundamilia_nyererei
ENSFHEG00000011228	rcl1	99	82.337	ENSPNAG00000028307	rcl1	91	82.337	Pygocentrus_nattereri
ENSFHEG00000011228	rcl1	99	79.730	ENSRNOG00000015491	Rcl1	99	79.730	Rattus_norvegicus
ENSFHEG00000011228	rcl1	99	79.459	ENSRBIG00000035818	RCL1	99	79.459	Rhinopithecus_bieti
ENSFHEG00000011228	rcl1	99	79.730	ENSRROG00000029781	RCL1	97	82.418	Rhinopithecus_roxellana
ENSFHEG00000011228	rcl1	98	38.649	YOL010W	-	97	38.649	Saccharomyces_cerevisiae
ENSFHEG00000011228	rcl1	99	80.000	ENSSBOG00000026369	RCL1	97	82.514	Saimiri_boliviensis_boliviensis
ENSFHEG00000011228	rcl1	91	79.758	ENSSHAG00000014086	RCL1	100	80.060	Sarcophilus_harrisii
ENSFHEG00000011228	rcl1	100	81.183	ENSSFOG00015023020	rcl1	100	81.183	Scleropages_formosus
ENSFHEG00000011228	rcl1	100	90.591	ENSSMAG00000019751	rcl1	87	90.212	Scophthalmus_maximus
ENSFHEG00000011228	rcl1	100	91.398	ENSSDUG00000006349	rcl1	100	91.398	Seriola_dumerili
ENSFHEG00000011228	rcl1	100	90.591	ENSSLDG00000022076	rcl1	100	90.591	Seriola_lalandi_dorsalis
ENSFHEG00000011228	rcl1	99	79.730	ENSSARG00000009260	RCL1	99	79.730	Sorex_araneus
ENSFHEG00000011228	rcl1	99	77.297	ENSSPUG00000016330	RCL1	99	77.297	Sphenodon_punctatus
ENSFHEG00000011228	rcl1	100	92.473	ENSSPAG00000018038	rcl1	100	92.473	Stegastes_partitus
ENSFHEG00000011228	rcl1	99	80.000	ENSSSCG00000005217	RCL1	84	78.158	Sus_scrofa
ENSFHEG00000011228	rcl1	99	75.538	ENSTGUG00000005138	RCL1	99	75.538	Taeniopygia_guttata
ENSFHEG00000011228	rcl1	100	88.978	ENSTRUG00000010493	rcl1	100	88.978	Takifugu_rubripes
ENSFHEG00000011228	rcl1	100	85.484	ENSTNIG00000013214	rcl1	100	85.294	Tetraodon_nigroviridis
ENSFHEG00000011228	rcl1	99	75.135	ENSTBEG00000016339	RCL1	99	75.135	Tupaia_belangeri
ENSFHEG00000011228	rcl1	99	79.459	ENSTTRG00000016525	RCL1	99	79.459	Tursiops_truncatus
ENSFHEG00000011228	rcl1	99	81.081	ENSUAMG00000005598	RCL1	99	82.188	Ursus_americanus
ENSFHEG00000011228	rcl1	90	81.707	ENSUMAG00000017890	RCL1	97	81.707	Ursus_maritimus
ENSFHEG00000011228	rcl1	90	81.098	ENSVPAG00000009188	RCL1	100	81.098	Vicugna_pacos
ENSFHEG00000011228	rcl1	90	82.371	ENSVVUG00000007304	RCL1	89	82.371	Vulpes_vulpes
ENSFHEG00000011228	rcl1	100	72.800	ENSXETG00000000592	rcl1	100	72.800	Xenopus_tropicalis
ENSFHEG00000011228	rcl1	100	95.968	ENSXCOG00000004922	rcl1	100	95.968	Xiphophorus_couchianus
ENSFHEG00000011228	rcl1	100	95.968	ENSXMAG00000022366	RCL1	100	95.968	Xiphophorus_maculatus