EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000011483 (Gene tree)
Gene ID: 105927564
Gene Symbol: zgc:101559
Alias: -
Full Name: ras-related protein Rab-33B-like
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 3821 bases
Position: chrKN811310.1:2716967-2720787
Accession: 105927564
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000010191	MMR_HSR1	PF01926.23	7.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000016852	-	1923	XM_012864383	ENSFHEP00000010191	234 (aa)	XP_012719837	UPI000644D79A

Gene Model

Click here to download ENSFHEG00000011483's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000011483's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000011483	zgc:101559	85	33.333	ENSFHEG00000010509	rab4a	95	33.333
ENSFHEG00000011483	zgc:101559	72	47.024	ENSFHEG00000014924	rab1ba	81	47.024
ENSFHEG00000011483	zgc:101559	64	42.953	ENSFHEG00000001477	-	61	41.912
ENSFHEG00000011483	zgc:101559	72	46.429	ENSFHEG00000014414	-	81	46.429
ENSFHEG00000011483	zgc:101559	63	40.816	ENSFHEG00000019455	rab18a	71	40.816
ENSFHEG00000011483	zgc:101559	74	41.040	ENSFHEG00000018353	rab11bb	78	41.040
ENSFHEG00000011483	zgc:101559	63	42.857	ENSFHEG00000009378	rab15	68	42.857
ENSFHEG00000011483	zgc:101559	77	40.984	ENSFHEG00000004319	rab12	73	40.984
ENSFHEG00000011483	zgc:101559	51	31.405	ENSFHEG00000009487	arl4aa	60	31.405
ENSFHEG00000011483	zgc:101559	74	34.682	ENSFHEG00000004875	si:ch73-116o1.2	81	34.682
ENSFHEG00000011483	zgc:101559	72	39.766	ENSFHEG00000012702	rab22a	84	39.766
ENSFHEG00000011483	zgc:101559	71	37.278	ENSFHEG00000006551	rab36	61	37.278
ENSFHEG00000011483	zgc:101559	86	36.190	ENSFHEG00000005588	RAB7A	87	36.190
ENSFHEG00000011483	zgc:101559	77	38.889	ENSFHEG00000022642	rab11ba	82	38.889
ENSFHEG00000011483	zgc:101559	79	39.130	ENSFHEG00000019668	rab11a	85	39.130
ENSFHEG00000011483	zgc:101559	65	36.306	ENSFHEG00000021111	rab9a	77	36.306
ENSFHEG00000011483	zgc:101559	66	47.742	ENSFHEG00000002885	-	72	47.742
ENSFHEG00000011483	zgc:101559	73	38.596	ENSFHEG00000012117	rab5c	75	38.596
ENSFHEG00000011483	zgc:101559	68	40.625	ENSFHEG00000003018	rab25b	79	40.625
ENSFHEG00000011483	zgc:101559	62	35.135	ENSFHEG00000016504	si:cabz01085950.1	71	35.135
ENSFHEG00000011483	zgc:101559	85	36.683	ENSFHEG00000015268	-	88	36.683
ENSFHEG00000011483	zgc:101559	63	43.333	ENSFHEG00000012041	si:dkey-34d22.5	67	43.333
ENSFHEG00000011483	zgc:101559	73	39.766	ENSFHEG00000014070	rab5aa	77	39.766
ENSFHEG00000011483	zgc:101559	86	35.407	ENSFHEG00000007101	RAB7A	98	35.407
ENSFHEG00000011483	zgc:101559	63	41.892	ENSFHEG00000013106	rab42a	67	41.892
ENSFHEG00000011483	zgc:101559	78	45.055	ENSFHEG00000022176	zgc:171927	82	45.055
ENSFHEG00000011483	zgc:101559	86	35.610	ENSFHEG00000002502	si:dkey-13a21.4	97	35.610
ENSFHEG00000011483	zgc:101559	97	57.642	ENSFHEG00000022141	rab33a	95	57.642
ENSFHEG00000011483	zgc:101559	84	42.132	ENSFHEG00000004891	rab35b	97	42.132
ENSFHEG00000011483	zgc:101559	85	34.804	ENSFHEG00000022524	rab6bb	95	34.804
ENSFHEG00000011483	zgc:101559	63	36.486	ENSFHEG00000003799	rheb	79	36.486
ENSFHEG00000011483	zgc:101559	63	36.486	ENSFHEG00000008212	rhebl1	79	36.486
ENSFHEG00000011483	zgc:101559	85	34.343	ENSFHEG00000010055	hrasb	97	34.343
ENSFHEG00000011483	zgc:101559	68	41.250	ENSFHEG00000014186	rab25a	73	41.250
ENSFHEG00000011483	zgc:101559	74	40.462	ENSFHEG00000022676	-	78	40.462
ENSFHEG00000011483	zgc:101559	70	35.366	ENSFHEG00000023069	rab23	71	35.795
ENSFHEG00000011483	zgc:101559	83	60.976	ENSFHEG00000006820	rab33ba	85	60.976
ENSFHEG00000011483	zgc:101559	63	41.497	ENSFHEG00000020035	rab18b	71	41.497
ENSFHEG00000011483	zgc:101559	84	41.919	ENSFHEG00000021221	rab13	95	41.919
ENSFHEG00000011483	zgc:101559	67	32.919	ENSFHEG00000019106	rasl11b	71	33.149
ENSFHEG00000011483	zgc:101559	86	30.882	ENSFHEG00000018764	RAB9A	93	30.882
ENSFHEG00000011483	zgc:101559	67	41.667	ENSFHEG00000001296	rab2a	73	41.667
ENSFHEG00000011483	zgc:101559	60	45.714	ENSFHEG00000014087	RAB15	69	44.218
ENSFHEG00000011483	zgc:101559	72	36.932	ENSFHEG00000019684	rasl11a	68	36.932
ENSFHEG00000011483	zgc:101559	58	42.647	ENSFHEG00000018450	RAB14	68	42.647
ENSFHEG00000011483	zgc:101559	74	38.728	ENSFHEG00000000832	rab11al	82	38.728
ENSFHEG00000011483	zgc:101559	64	37.255	ENSFHEG00000009417	rab9b	69	37.255
ENSFHEG00000011483	zgc:101559	60	43.972	ENSFHEG00000013691	rab34a	53	43.972
ENSFHEG00000011483	zgc:101559	73	34.706	ENSFHEG00000009108	kras	87	36.471
ENSFHEG00000011483	zgc:101559	67	47.799	ENSFHEG00000020877	RAB39B	74	47.799
ENSFHEG00000011483	zgc:101559	64	34.416	ENSFHEG00000015993	RAB29	74	34.416
ENSFHEG00000011483	zgc:101559	64	44.295	ENSFHEG00000015996	RAB41	70	44.295
ENSFHEG00000011483	zgc:101559	71	39.521	ENSFHEG00000000695	-	75	39.521
ENSFHEG00000011483	zgc:101559	85	43.500	ENSFHEG00000022985	rab1ab	96	43.500
ENSFHEG00000011483	zgc:101559	71	30.539	ENSFHEG00000018971	nkiras1	85	30.539
ENSFHEG00000011483	zgc:101559	71	49.102	ENSFHEG00000013918	rab30	80	49.102

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000011483	zgc:101559	100	83.333	ENSAPOG00000007503	zgc:101559	100	83.333	Acanthochromis_polyacanthus
ENSFHEG00000011483	zgc:101559	87	90.148	ENSACIG00000021459	zgc:101559	89	90.148	Amphilophus_citrinellus
ENSFHEG00000011483	zgc:101559	100	84.188	ENSAOCG00000024675	zgc:101559	100	84.188	Amphiprion_ocellaris
ENSFHEG00000011483	zgc:101559	100	84.188	ENSAPEG00000005176	zgc:101559	100	84.188	Amphiprion_percula
ENSFHEG00000011483	zgc:101559	100	82.051	ENSATEG00000007761	zgc:101559	100	82.051	Anabas_testudineus
ENSFHEG00000011483	zgc:101559	99	84.848	ENSACLG00000027006	zgc:101559	98	84.848	Astatotilapia_calliptera
ENSFHEG00000011483	zgc:101559	100	73.191	ENSAMXG00000040460	zgc:101559	94	73.191	Astyanax_mexicanus
ENSFHEG00000011483	zgc:101559	100	76.496	ENSCSEG00000006243	zgc:101559	100	76.496	Cynoglossus_semilaevis
ENSFHEG00000011483	zgc:101559	100	91.026	ENSCVAG00000019227	zgc:101559	100	91.026	Cyprinodon_variegatus
ENSFHEG00000011483	zgc:101559	100	72.766	ENSDARG00000003257	zgc:101559	100	72.766	Danio_rerio
ENSFHEG00000011483	zgc:101559	91	80.660	ENSGMOG00000011665	zgc:101559	99	80.660	Gadus_morhua
ENSFHEG00000011483	zgc:101559	100	88.889	ENSGAFG00000021202	zgc:101559	100	88.889	Gambusia_affinis
ENSFHEG00000011483	zgc:101559	91	80.660	ENSGACG00000001725	zgc:101559	91	80.660	Gasterosteus_aculeatus
ENSFHEG00000011483	zgc:101559	100	84.615	ENSHBUG00000007827	zgc:101559	100	84.615	Haplochromis_burtoni
ENSFHEG00000011483	zgc:101559	100	75.000	ENSHCOG00000009133	zgc:101559	100	76.471	Hippocampus_comes
ENSFHEG00000011483	zgc:101559	90	73.810	ENSIPUG00000022394	zgc:101559	91	73.810	Ictalurus_punctatus
ENSFHEG00000011483	zgc:101559	100	80.000	ENSKMAG00000002862	zgc:101559	100	80.000	Kryptolebias_marmoratus
ENSFHEG00000011483	zgc:101559	100	81.624	ENSLBEG00000025798	zgc:101559	100	81.624	Labrus_bergylta
ENSFHEG00000011483	zgc:101559	86	68.159	ENSLACG00000011557	zgc:101559	87	68.159	Latimeria_chalumnae
ENSFHEG00000011483	zgc:101559	89	76.077	ENSLOCG00000005904	zgc:101559	89	76.077	Lepisosteus_oculatus
ENSFHEG00000011483	zgc:101559	100	82.051	ENSMAMG00000017431	zgc:101559	100	82.051	Mastacembelus_armatus
ENSFHEG00000011483	zgc:101559	100	84.615	ENSMZEG00005021778	zgc:101559	100	84.615	Maylandia_zebra
ENSFHEG00000011483	zgc:101559	100	79.487	ENSMMOG00000019779	zgc:101559	100	79.487	Mola_mola
ENSFHEG00000011483	zgc:101559	100	79.060	ENSMALG00000003712	zgc:101559	100	79.060	Monopterus_albus
ENSFHEG00000011483	zgc:101559	100	83.761	ENSNBRG00000002684	zgc:101559	100	83.761	Neolamprologus_brichardi
ENSFHEG00000011483	zgc:101559	100	84.615	ENSONIG00000006715	-	100	84.615	Oreochromis_niloticus
ENSFHEG00000011483	zgc:101559	100	82.479	ENSORLG00000030642	zgc:101559	100	82.479	Oryzias_latipes
ENSFHEG00000011483	zgc:101559	100	81.624	ENSORLG00020012685	zgc:101559	100	81.624	Oryzias_latipes_hni
ENSFHEG00000011483	zgc:101559	100	82.051	ENSORLG00015016047	zgc:101559	100	82.051	Oryzias_latipes_hsok
ENSFHEG00000011483	zgc:101559	100	82.906	ENSOMEG00000013128	zgc:101559	100	82.906	Oryzias_melastigma
ENSFHEG00000011483	zgc:101559	86	74.752	ENSPKIG00000013397	zgc:101559	85	74.752	Paramormyrops_kingsleyae
ENSFHEG00000011483	zgc:101559	100	90.598	ENSPFOG00000009101	-	100	90.598	Poecilia_formosa
ENSFHEG00000011483	zgc:101559	100	90.598	ENSPLAG00000020627	zgc:101559	100	90.598	Poecilia_latipinna
ENSFHEG00000011483	zgc:101559	100	91.026	ENSPMEG00000010152	zgc:101559	100	91.026	Poecilia_mexicana
ENSFHEG00000011483	zgc:101559	100	91.026	ENSPREG00000007017	zgc:101559	100	91.026	Poecilia_reticulata
ENSFHEG00000011483	zgc:101559	100	84.615	ENSPNYG00000012922	zgc:101559	100	84.615	Pundamilia_nyererei
ENSFHEG00000011483	zgc:101559	99	72.103	ENSPNAG00000017856	zgc:101559	100	72.103	Pygocentrus_nattereri
ENSFHEG00000011483	zgc:101559	85	77.500	ENSSFOG00015006175	zgc:101559	86	77.500	Scleropages_formosus
ENSFHEG00000011483	zgc:101559	99	79.399	ENSSMAG00000002229	zgc:101559	99	79.399	Scophthalmus_maximus
ENSFHEG00000011483	zgc:101559	100	85.470	ENSSDUG00000008151	zgc:101559	100	85.470	Seriola_dumerili
ENSFHEG00000011483	zgc:101559	100	85.470	ENSSLDG00000019214	zgc:101559	100	85.470	Seriola_lalandi_dorsalis
ENSFHEG00000011483	zgc:101559	100	84.615	ENSSPAG00000006404	zgc:101559	100	84.615	Stegastes_partitus
ENSFHEG00000011483	zgc:101559	100	78.632	ENSTRUG00000009903	zgc:101559	100	78.632	Takifugu_rubripes
ENSFHEG00000011483	zgc:101559	93	77.523	ENSTNIG00000015000	zgc:101559	92	77.523	Tetraodon_nigroviridis
ENSFHEG00000011483	zgc:101559	100	91.026	ENSXCOG00000018683	zgc:101559	100	91.026	Xiphophorus_couchianus
ENSFHEG00000011483	zgc:101559	100	91.026	ENSXMAG00000011171	zgc:101559	100	91.026	Xiphophorus_maculatus