EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000011539 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC105920598
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 14203 bases
Position: chrKN806104.1:79057-93259
Accession: 105920598
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000010258	La	PF05383.17	4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000016900	-	2557	XM_021312715	ENSFHEP00000010258	445 (aa)	XP_021168390	-

Gene Model

Click here to download ENSFHEG00000011539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000011539's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000011539	-	53	47.410	ENSFHEG00000013037	LARP4B	65	63.025

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000011539	-	77	42.582	ENSAOCG00000007887	-	78	57.718	Amphiprion_ocellaris
ENSFHEG00000011539	-	80	40.945	ENSBTAG00000013899	LARP4B	53	40.945	Bos_taurus
ENSFHEG00000011539	-	79	40.409	ENSCPBG00000017063	LARP4B	53	40.409	Chrysemys_picta_bellii
ENSFHEG00000011539	-	79	43.213	ENSCSEG00000007342	LARP4B	50	43.370	Cynoglossus_semilaevis
ENSFHEG00000011539	-	72	42.330	ENSDNOG00000045543	-	69	42.330	Dasypus_novemcinctus
ENSFHEG00000011539	-	91	45.024	ENSELUG00000001417	-	55	47.863	Esox_lucius
ENSFHEG00000011539	-	79	40.103	ENSFALG00000006961	LARP4B	53	40.103	Ficedula_albicollis
ENSFHEG00000011539	-	55	52.988	ENSGMOG00000010818	-	53	44.807	Gadus_morhua
ENSFHEG00000011539	-	89	37.021	ENSGALG00000006672	LARP4B	53	40.360	Gallus_gallus
ENSFHEG00000011539	-	53	48.548	ENSGAFG00000002038	-	70	48.548	Gambusia_affinis
ENSFHEG00000011539	-	71	42.938	ENSLOCG00000012290	larp4b	50	42.571	Lepisosteus_oculatus
ENSFHEG00000011539	-	60	51.237	ENSMZEG00005006498	-	56	46.875	Maylandia_zebra
ENSFHEG00000011539	-	95	37.552	ENSMICG00000001301	LARP4B	51	41.444	Microcebus_murinus
ENSFHEG00000011539	-	63	47.059	ENSOMEG00000009301	-	74	42.077	Oryzias_melastigma
ENSFHEG00000011539	-	89	42.903	ENSPSIG00000005600	LARP4B	69	48.701	Pelodiscus_sinensis
ENSFHEG00000011539	-	59	49.091	ENSSMAG00000005982	-	70	53.378	Scophthalmus_maximus
ENSFHEG00000011539	-	80	41.989	ENSSPUG00000002102	-	50	41.989	Sphenodon_punctatus
ENSFHEG00000011539	-	78	41.867	ENSSSCG00000011162	LARP4B	58	42.978	Sus_scrofa
ENSFHEG00000011539	-	75	41.713	ENSUAMG00000016461	LARP4B	52	41.713	Ursus_americanus
ENSFHEG00000011539	-	95	37.074	ENSXETG00000016882	larp4b	66	36.768	Xenopus_tropicalis
ENSFHEG00000011539	-	55	48.855	ENSXCOG00000019952	LARP4B	66	62.295	Xiphophorus_couchianus