EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000011638 (Gene tree)
Gene ID: 105932732
Gene Symbol: -
Alias: -
Full Name: myosin light chain kinase%2C smooth muscle
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 26623 bases
Position: chrKN811394.1:1640186-1666808
Accession: 105932732
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000010245	RIO1	PF01163.22	7e-07	1	1
ENSFHEP00000027854	RIO1	PF01163.22	7.2e-07	1	1
ENSFHEP00000010264	RIO1	PF01163.22	7.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000016943	-	3421	-	ENSFHEP00000027854	811 (aa)	-	-
ENSFHET00000016924	-	3268	XM_021321255	ENSFHEP00000010264	827 (aa)	XP_021176930	-
ENSFHET00000016895	-	2343	-	ENSFHEP00000010245	780 (aa)	-	-

Gene Model

Click here to download ENSFHEG00000011638's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000011638's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000011638	-	99	50.637	ENSFHEG00000010974	-	99	50.637

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000011638	-	99	51.326	ENSAPOG00000019520	-	99	51.211	Acanthochromis_polyacanthus
ENSFHEG00000011638	-	99	75.207	ENSAPOG00000023231	mylk5	99	72.592	Acanthochromis_polyacanthus
ENSFHEG00000011638	-	99	53.191	ENSACIG00000024477	-	98	53.191	Amphilophus_citrinellus
ENSFHEG00000011638	-	99	72.727	ENSAOCG00000014130	mylk5	99	72.727	Amphiprion_ocellaris
ENSFHEG00000011638	-	99	51.442	ENSAOCG00000024465	-	99	51.442	Amphiprion_ocellaris
ENSFHEG00000011638	-	99	73.034	ENSAPEG00000017851	mylk5	99	73.034	Amphiprion_percula
ENSFHEG00000011638	-	99	53.382	ENSAPEG00000014652	-	99	53.382	Amphiprion_percula
ENSFHEG00000011638	-	99	69.287	ENSATEG00000002426	mylk5	99	69.287	Anabas_testudineus
ENSFHEG00000011638	-	99	70.405	ENSACLG00000003301	mylk5	99	71.864	Astatotilapia_calliptera
ENSFHEG00000011638	-	99	51.932	ENSACLG00000007583	-	99	51.932	Astatotilapia_calliptera
ENSFHEG00000011638	-	82	55.988	ENSAMXG00000019493	-	92	55.988	Astyanax_mexicanus
ENSFHEG00000011638	-	99	65.068	ENSCSEG00000017281	mylk5	99	65.068	Cynoglossus_semilaevis
ENSFHEG00000011638	-	99	49.650	ENSCVAG00000022136	-	99	49.650	Cyprinodon_variegatus
ENSFHEG00000011638	-	100	77.167	ENSCVAG00000022813	mylk5	100	77.167	Cyprinodon_variegatus
ENSFHEG00000011638	-	100	79.930	ENSGAFG00000000269	mylk5	100	79.930	Gambusia_affinis
ENSFHEG00000011638	-	80	73.042	ENSGACG00000008527	mylk5	99	73.042	Gasterosteus_aculeatus
ENSFHEG00000011638	-	99	52.443	ENSHBUG00000016459	-	99	52.443	Haplochromis_burtoni
ENSFHEG00000011638	-	99	69.570	ENSHBUG00000002257	mylk5	99	69.570	Haplochromis_burtoni
ENSFHEG00000011638	-	84	56.869	ENSHCOG00000015710	-	88	56.869	Hippocampus_comes
ENSFHEG00000011638	-	100	53.559	ENSIPUG00000012659	mylk5	99	54.235	Ictalurus_punctatus
ENSFHEG00000011638	-	100	73.495	ENSKMAG00000019605	mylk5	99	73.495	Kryptolebias_marmoratus
ENSFHEG00000011638	-	99	49.131	ENSKMAG00000016742	-	99	49.131	Kryptolebias_marmoratus
ENSFHEG00000011638	-	99	54.080	ENSLBEG00000004115	-	98	54.080	Labrus_bergylta
ENSFHEG00000011638	-	100	69.202	ENSLBEG00000003526	mylk5	99	69.202	Labrus_bergylta
ENSFHEG00000011638	-	99	71.313	ENSMAMG00000000610	mylk5	99	71.313	Mastacembelus_armatus
ENSFHEG00000011638	-	99	70.173	ENSMZEG00005022663	mylk5	99	70.173	Maylandia_zebra
ENSFHEG00000011638	-	99	68.564	ENSMMOG00000020584	mylk5	99	68.564	Mola_mola
ENSFHEG00000011638	-	99	51.418	ENSMALG00000022416	-	96	50.518	Monopterus_albus
ENSFHEG00000011638	-	99	70.534	ENSMALG00000004945	mylk5	99	70.534	Monopterus_albus
ENSFHEG00000011638	-	56	80.525	ENSONIG00000019875	-	99	80.525	Oreochromis_niloticus
ENSFHEG00000011638	-	95	69.544	ENSONIG00000001203	mylk5	99	80.525	Oreochromis_niloticus
ENSFHEG00000011638	-	99	51.639	ENSONIG00000016230	-	99	51.639	Oreochromis_niloticus
ENSFHEG00000011638	-	100	76.224	ENSPFOG00000013597	mylk5	100	76.224	Poecilia_formosa
ENSFHEG00000011638	-	100	77.874	ENSPLAG00000023779	mylk5	100	77.874	Poecilia_latipinna
ENSFHEG00000011638	-	100	79.698	ENSPMEG00000023897	mylk5	100	79.181	Poecilia_mexicana
ENSFHEG00000011638	-	94	80.721	ENSPREG00000009707	mylk5	100	80.721	Poecilia_reticulata
ENSFHEG00000011638	-	99	49.884	ENSPREG00000003222	-	99	49.884	Poecilia_reticulata
ENSFHEG00000011638	-	99	68.339	ENSPNYG00000010046	mylk5	99	68.339	Pundamilia_nyererei
ENSFHEG00000011638	-	99	53.125	ENSPNYG00000019509	-	82	72.632	Pundamilia_nyererei
ENSFHEG00000011638	-	84	60.819	ENSSFOG00015004885	-	95	60.819	Scleropages_formosus
ENSFHEG00000011638	-	99	53.919	ENSSMAG00000020328	-	99	53.919	Scophthalmus_maximus
ENSFHEG00000011638	-	99	68.156	ENSSMAG00000006784	mylk5	99	68.156	Scophthalmus_maximus
ENSFHEG00000011638	-	99	52.669	ENSSDUG00000020847	-	99	52.669	Seriola_dumerili
ENSFHEG00000011638	-	99	52.426	ENSSLDG00000019897	-	99	52.426	Seriola_lalandi_dorsalis
ENSFHEG00000011638	-	99	71.995	ENSSPAG00000020815	mylk5	99	71.995	Stegastes_partitus
ENSFHEG00000011638	-	92	52.050	ENSSPAG00000019068	-	99	52.050	Stegastes_partitus
ENSFHEG00000011638	-	99	64.335	ENSTRUG00000015150	mylk5	99	64.335	Takifugu_rubripes
ENSFHEG00000011638	-	73	71.358	ENSTNIG00000011699	mylk5	99	71.358	Tetraodon_nigroviridis
ENSFHEG00000011638	-	52	63.507	ENSTNIG00000004928	-	99	63.981	Tetraodon_nigroviridis
ENSFHEG00000011638	-	95	52.375	ENSXCOG00000005927	-	89	66.667	Xiphophorus_couchianus
ENSFHEG00000011638	-	100	80.046	ENSXMAG00000007789	mylk5	100	80.046	Xiphophorus_maculatus
ENSFHEG00000011638	-	86	51.268	ENSXMAG00000015589	-	93	51.268	Xiphophorus_maculatus