EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000011854 (Gene tree)
Gene ID: 105929296
Gene Symbol: SRL (1 of many)
Alias: SAR
Full Name: sarcalumenin-like
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 24325 bases
Position: chrKN811336.1:1647447-1671771
Accession: 105929296
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000010475	MMR_HSR1	PF01926.23	2.4e-08	1	1
ENSFHEP00000027990	MMR_HSR1	PF01926.23	3e-08	1	1
ENSFHEP00000010487	MMR_HSR1	PF01926.23	6.6e-08	1	1
ENSFHEP00000027992	MMR_HSR1	PF01926.23	6.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000017211	SRL (1 of many)-202	5457	-	ENSFHEP00000010487	745 (aa)	-	-
ENSFHET00000017196	SRL (1 of many)-201	1338	-	ENSFHEP00000010475	445 (aa)	-	-
ENSFHET00000017220	SRL (1 of many)-204	5553	XM_012867014	ENSFHEP00000027992	777 (aa)	XP_012722468	A0A146WNE9
ENSFHET00000017217	SRL (1 of many)-203	4671	-	ENSFHEP00000027990	483 (aa)	-	-

Gene Model

Click here to download ENSFHEG00000011854's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000011854's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000011854	SRL	98	77.828	ENSFHEG00000011239	srl	100	73.967
ENSFHEG00000011854	SRL	81	31.714	ENSFHEG00000018572	ehd3	71	32.997
ENSFHEG00000011854	SRL	87	31.443	ENSFHEG00000002690	ehd1a	71	31.899
ENSFHEG00000011854	SRL	80	35.556	ENSFHEG00000020637	ehd2b	65	35.556
ENSFHEG00000011854	SRL	82	33.607	ENSFHEG00000002126	-	69	32.061

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000011854	SRL	98	76.244	ENSG00000185739	SRL	99	75.349	Homo_sapiens
ENSFHEG00000011854	SRL	99	77.027	ENSAPOG00000018093	srl	99	76.644	Acanthochromis_polyacanthus
ENSFHEG00000011854	SRL	99	87.613	ENSAPOG00000012432	SRL	99	87.613	Acanthochromis_polyacanthus
ENSFHEG00000011854	SRL	98	76.018	ENSAMEG00000010862	SRL	50	75.113	Ailuropoda_melanoleuca
ENSFHEG00000011854	SRL	99	77.477	ENSACIG00000015799	srl	98	77.252	Amphilophus_citrinellus
ENSFHEG00000011854	SRL	100	87.191	ENSACIG00000015419	SRL	100	87.191	Amphilophus_citrinellus
ENSFHEG00000011854	SRL	100	87.333	ENSAOCG00000017049	SRL	98	87.111	Amphiprion_ocellaris
ENSFHEG00000011854	SRL	97	76.728	ENSAOCG00000007574	srl	100	76.498	Amphiprion_ocellaris
ENSFHEG00000011854	SRL	99	76.802	ENSAPEG00000006911	srl	100	72.990	Amphiprion_percula
ENSFHEG00000011854	SRL	100	84.270	ENSAPEG00000006533	SRL	98	84.719	Amphiprion_percula
ENSFHEG00000011854	SRL	99	77.252	ENSATEG00000024315	srl	100	73.196	Anabas_testudineus
ENSFHEG00000011854	SRL	100	84.848	ENSATEG00000009643	SRL	100	63.254	Anabas_testudineus
ENSFHEG00000011854	SRL	98	74.393	ENSACAG00000016380	SRL	84	74.123	Anolis_carolinensis
ENSFHEG00000011854	SRL	99	77.354	ENSACLG00000027685	srl	98	77.130	Astatotilapia_calliptera
ENSFHEG00000011854	SRL	100	85.065	ENSACLG00000024674	SRL	99	67.038	Astatotilapia_calliptera
ENSFHEG00000011854	SRL	93	80.435	ENSAMXG00000038693	SRL	100	76.754	Astyanax_mexicanus
ENSFHEG00000011854	SRL	99	76.404	ENSAMXG00000018789	srl	92	73.292	Astyanax_mexicanus
ENSFHEG00000011854	SRL	98	76.190	ENSBTAG00000001078	SRL	56	75.737	Bos_taurus
ENSFHEG00000011854	SRL	98	76.471	ENSCJAG00000019750	SRL	93	75.566	Callithrix_jacchus
ENSFHEG00000011854	SRL	98	76.018	ENSCAFG00000019233	SRL	82	75.113	Canis_familiaris
ENSFHEG00000011854	SRL	98	76.190	ENSCAFG00020025024	SRL	64	66.355	Canis_lupus_dingo
ENSFHEG00000011854	SRL	98	76.190	ENSCHIG00000017927	SRL	55	75.737	Capra_hircus
ENSFHEG00000011854	SRL	98	76.244	ENSTSYG00000007919	SRL	99	75.581	Carlito_syrichta
ENSFHEG00000011854	SRL	98	76.471	ENSCPOG00000012643	SRL	100	70.697	Cavia_porcellus
ENSFHEG00000011854	SRL	98	72.624	ENSCCAG00000032646	SRL	100	77.309	Cebus_capucinus
ENSFHEG00000011854	SRL	98	76.417	ENSCATG00000032227	-	93	75.339	Cercocebus_atys
ENSFHEG00000011854	SRL	98	76.471	ENSCLAG00000016242	SRL	100	70.697	Chinchilla_lanigera
ENSFHEG00000011854	SRL	86	79.740	ENSCHOG00000001618	SRL	52	78.701	Choloepus_hoffmanni
ENSFHEG00000011854	SRL	98	78.351	ENSCPBG00000026371	SRL	99	69.919	Chrysemys_picta_bellii
ENSFHEG00000011854	SRL	92	55.825	ENSCING00000005231	-	94	55.213	Ciona_intestinalis
ENSFHEG00000011854	SRL	98	76.244	ENSCANG00000035872	SRL	99	75.349	Colobus_angolensis_palliatus
ENSFHEG00000011854	SRL	98	76.644	ENSCGRG00001016630	Srl	99	71.546	Cricetulus_griseus_chok1gshd
ENSFHEG00000011854	SRL	98	76.644	ENSCGRG00000005458	Srl	99	71.546	Cricetulus_griseus_crigri
ENSFHEG00000011854	SRL	99	83.296	ENSCSEG00000011866	SRL	90	82.405	Cynoglossus_semilaevis
ENSFHEG00000011854	SRL	99	76.233	ENSCSEG00000016151	srl	100	72.934	Cynoglossus_semilaevis
ENSFHEG00000011854	SRL	100	91.503	ENSCVAG00000022465	SRL	100	81.081	Cyprinodon_variegatus
ENSFHEG00000011854	SRL	98	77.828	ENSCVAG00000003513	srl	100	73.760	Cyprinodon_variegatus
ENSFHEG00000011854	SRL	84	80.990	ENSDARG00000112959	CABZ01072309.1	100	80.407	Danio_rerio
ENSFHEG00000011854	SRL	99	77.629	ENSDARG00000104587	srl	100	74.380	Danio_rerio
ENSFHEG00000011854	SRL	98	75.964	ENSDNOG00000011643	SRL	53	75.057	Dasypus_novemcinctus
ENSFHEG00000011854	SRL	98	75.395	ENSDORG00000014807	Srl	100	71.107	Dipodomys_ordii
ENSFHEG00000011854	SRL	79	64.387	ENSEBUG00000015937	srl	90	64.045	Eptatretus_burgeri
ENSFHEG00000011854	SRL	98	76.190	ENSEASG00005000942	SRL	53	75.283	Equus_asinus_asinus
ENSFHEG00000011854	SRL	98	76.190	ENSECAG00000024219	SRL	99	70.697	Equus_caballus
ENSFHEG00000011854	SRL	99	74.569	ENSELUG00000015616	srl	100	71.200	Esox_lucius
ENSFHEG00000011854	SRL	99	80.044	ENSELUG00000022266	SRL	57	72.037	Esox_lucius
ENSFHEG00000011854	SRL	98	75.395	ENSFCAG00000022075	SRL	93	75.566	Felis_catus
ENSFHEG00000011854	SRL	99	75.615	ENSFALG00000004328	SRL	63	75.615	Ficedula_albicollis
ENSFHEG00000011854	SRL	98	76.697	ENSFDAG00000006199	SRL	100	70.902	Fukomys_damarensis
ENSFHEG00000011854	SRL	98	75.110	ENSGMOG00000014954	srl	100	74.890	Gadus_morhua
ENSFHEG00000011854	SRL	99	75.839	ENSGALG00000038884	SRL	98	72.956	Gallus_gallus
ENSFHEG00000011854	SRL	99	93.034	ENSGAFG00000016984	SRL	99	93.018	Gambusia_affinis
ENSFHEG00000011854	SRL	99	77.703	ENSGAFG00000000010	srl	100	74.174	Gambusia_affinis
ENSFHEG00000011854	SRL	99	75.385	ENSGACG00000011332	srl	100	75.165	Gasterosteus_aculeatus
ENSFHEG00000011854	SRL	98	76.417	ENSGGOG00000011312	-	93	75.339	Gorilla_gorilla
ENSFHEG00000011854	SRL	100	85.281	ENSHBUG00000015710	SRL	99	68.069	Haplochromis_burtoni
ENSFHEG00000011854	SRL	99	77.354	ENSHBUG00000007581	srl	98	77.130	Haplochromis_burtoni
ENSFHEG00000011854	SRL	98	76.471	ENSHGLG00000015271	SRL	100	70.697	Heterocephalus_glaber_female
ENSFHEG00000011854	SRL	98	76.471	ENSHGLG00100019378	SRL	100	70.697	Heterocephalus_glaber_male
ENSFHEG00000011854	SRL	99	84.211	ENSHCOG00000001012	SRL	71	73.205	Hippocampus_comes
ENSFHEG00000011854	SRL	99	76.802	ENSHCOG00000008687	srl	98	76.577	Hippocampus_comes
ENSFHEG00000011854	SRL	99	74.777	ENSIPUG00000012513	srl	100	71.959	Ictalurus_punctatus
ENSFHEG00000011854	SRL	98	70.742	ENSIPUG00000011609	SRL	100	71.397	Ictalurus_punctatus
ENSFHEG00000011854	SRL	98	76.871	ENSSTOG00000021151	-	100	71.107	Ictidomys_tridecemlineatus
ENSFHEG00000011854	SRL	98	76.471	ENSJJAG00000016400	Srl	94	75.792	Jaculus_jaculus
ENSFHEG00000011854	SRL	97	77.880	ENSKMAG00000014115	srl	98	75.391	Kryptolebias_marmoratus
ENSFHEG00000011854	SRL	98	91.076	ENSKMAG00000019537	SRL	100	91.076	Kryptolebias_marmoratus
ENSFHEG00000011854	SRL	100	85.556	ENSLBEG00000013811	SRL	97	84.667	Labrus_bergylta
ENSFHEG00000011854	SRL	99	76.786	ENSLBEG00000026643	srl	100	73.608	Labrus_bergylta
ENSFHEG00000011854	SRL	99	73.051	ENSLACG00000002825	SRL	99	72.991	Latimeria_chalumnae
ENSFHEG00000011854	SRL	99	76.837	ENSLOCG00000002644	srl	96	76.339	Lepisosteus_oculatus
ENSFHEG00000011854	SRL	98	76.190	ENSLAFG00000006329	SRL	50	75.737	Loxodonta_africana
ENSFHEG00000011854	SRL	96	76.279	ENSMFAG00000037383	SRL	99	75.349	Macaca_fascicularis
ENSFHEG00000011854	SRL	98	76.417	ENSMNEG00000019236	-	93	75.339	Macaca_nemestrina
ENSFHEG00000011854	SRL	98	70.588	ENSMLEG00000032156	SRL	93	73.239	Mandrillus_leucophaeus
ENSFHEG00000011854	SRL	99	76.802	ENSMAMG00000023322	srl	94	76.577	Mastacembelus_armatus
ENSFHEG00000011854	SRL	100	83.333	ENSMAMG00000013756	SRL	99	63.115	Mastacembelus_armatus
ENSFHEG00000011854	SRL	100	85.281	ENSMZEG00005004010	SRL	100	67.534	Maylandia_zebra
ENSFHEG00000011854	SRL	99	77.354	ENSMZEG00005004548	srl	98	77.130	Maylandia_zebra
ENSFHEG00000011854	SRL	99	75.839	ENSMGAG00000009342	SRL	94	80.108	Meleagris_gallopavo
ENSFHEG00000011854	SRL	98	76.871	ENSMICG00000032307	SRL	93	75.792	Microcebus_murinus
ENSFHEG00000011854	SRL	98	76.018	ENSMOCG00000008208	Srl	99	70.928	Microtus_ochrogaster
ENSFHEG00000011854	SRL	99	75.893	ENSMMOG00000013970	srl	99	75.670	Mola_mola
ENSFHEG00000011854	SRL	98	85.242	ENSMMOG00000021572	SRL	99	84.802	Mola_mola
ENSFHEG00000011854	SRL	98	77.551	ENSMODG00000016380	-	50	77.098	Monodelphis_domestica
ENSFHEG00000011854	SRL	93	86.747	ENSMALG00000000670	SRL	98	86.747	Monopterus_albus
ENSFHEG00000011854	SRL	98	76.471	ENSMALG00000005039	srl	98	76.244	Monopterus_albus
ENSFHEG00000011854	SRL	98	76.644	MGP_CAROLIEiJ_G0020400	Srl	100	71.193	Mus_caroli
ENSFHEG00000011854	SRL	98	76.644	ENSMUSG00000022519	Srl	100	71.193	Mus_musculus
ENSFHEG00000011854	SRL	98	76.417	MGP_PahariEiJ_G0016108	Srl	56	64.298	Mus_pahari
ENSFHEG00000011854	SRL	98	76.644	MGP_SPRETEiJ_G0021294	Srl	100	71.193	Mus_spretus
ENSFHEG00000011854	SRL	98	76.190	ENSMPUG00000015025	SRL	53	75.283	Mustela_putorius_furo
ENSFHEG00000011854	SRL	98	76.644	ENSMLUG00000030733	SRL	55	75.737	Myotis_lucifugus
ENSFHEG00000011854	SRL	98	76.697	ENSNGAG00000019741	Srl	100	71.107	Nannospalax_galili
ENSFHEG00000011854	SRL	100	84.848	ENSNBRG00000002422	SRL	99	66.422	Neolamprologus_brichardi
ENSFHEG00000011854	SRL	99	77.703	ENSNBRG00000023775	srl	94	77.477	Neolamprologus_brichardi
ENSFHEG00000011854	SRL	98	71.946	ENSNLEG00000029051	SRL	93	74.648	Nomascus_leucogenys
ENSFHEG00000011854	SRL	98	71.493	ENSOPRG00000000477	-	52	71.202	Ochotona_princeps
ENSFHEG00000011854	SRL	98	77.149	ENSODEG00000013256	SRL	100	71.311	Octodon_degus
ENSFHEG00000011854	SRL	99	77.130	ENSONIG00000005192	srl	95	76.906	Oreochromis_niloticus
ENSFHEG00000011854	SRL	99	77.252	ENSORLG00000008291	srl	93	78.426	Oryzias_latipes
ENSFHEG00000011854	SRL	100	88.667	ENSORLG00000015064	SRL	98	88.764	Oryzias_latipes
ENSFHEG00000011854	SRL	100	88.889	ENSORLG00020018173	SRL	98	88.989	Oryzias_latipes_hni
ENSFHEG00000011854	SRL	99	77.477	ENSORLG00020019784	srl	81	78.680	Oryzias_latipes_hni
ENSFHEG00000011854	SRL	100	88.764	ENSORLG00015019063	SRL	98	88.764	Oryzias_latipes_hsok
ENSFHEG00000011854	SRL	99	77.252	ENSORLG00015009342	srl	97	73.760	Oryzias_latipes_hsok
ENSFHEG00000011854	SRL	100	87.446	ENSOMEG00000005682	SRL	72	82.353	Oryzias_melastigma
ENSFHEG00000011854	SRL	99	77.703	ENSOMEG00000010006	srl	98	77.500	Oryzias_melastigma
ENSFHEG00000011854	SRL	98	75.792	ENSOGAG00000029266	SRL	54	75.057	Otolemur_garnettii
ENSFHEG00000011854	SRL	98	76.190	ENSOARG00000003074	SRL	55	75.737	Ovis_aries
ENSFHEG00000011854	SRL	98	76.417	ENSPPAG00000024919	-	99	75.349	Pan_paniscus
ENSFHEG00000011854	SRL	98	75.113	ENSPPRG00000010274	SRL	99	75.814	Panthera_pardus
ENSFHEG00000011854	SRL	98	75.113	ENSPTIG00000015162	SRL	99	75.814	Panthera_tigris_altaica
ENSFHEG00000011854	SRL	98	76.417	ENSPTRG00000007712	SRL	99	75.349	Pan_troglodytes
ENSFHEG00000011854	SRL	98	76.244	ENSPANG00000013804	SRL	95	75.339	Papio_anubis
ENSFHEG00000011854	SRL	100	74.222	ENSPKIG00000024974	SRL	94	70.309	Paramormyrops_kingsleyae
ENSFHEG00000011854	SRL	99	77.009	ENSPKIG00000006405	srl	100	73.306	Paramormyrops_kingsleyae
ENSFHEG00000011854	SRL	99	76.339	ENSPMGG00000021081	srl	97	76.116	Periophthalmus_magnuspinnatus
ENSFHEG00000011854	SRL	98	84.703	ENSPMGG00000023505	-	99	84.510	Periophthalmus_magnuspinnatus
ENSFHEG00000011854	SRL	98	76.244	ENSPEMG00000015842	Srl	99	71.340	Peromyscus_maniculatus_bairdii
ENSFHEG00000011854	SRL	93	63.303	ENSPMAG00000004786	srl	99	62.844	Petromyzon_marinus
ENSFHEG00000011854	SRL	99	76.510	ENSPCIG00000012128	SRL	98	76.063	Phascolarctos_cinereus
ENSFHEG00000011854	SRL	99	76.096	ENSPFOG00000011408	srl	94	75.877	Poecilia_formosa
ENSFHEG00000011854	SRL	99	77.928	ENSPLAG00000008017	srl	96	77.703	Poecilia_latipinna
ENSFHEG00000011854	SRL	99	92.135	ENSPLAG00000002932	SRL	99	91.011	Poecilia_latipinna
ENSFHEG00000011854	SRL	99	77.928	ENSPMEG00000006745	srl	96	77.703	Poecilia_mexicana
ENSFHEG00000011854	SRL	97	92.735	ENSPMEG00000005890	SRL	99	78.544	Poecilia_mexicana
ENSFHEG00000011854	SRL	99	93.258	ENSPREG00000000315	SRL	99	92.135	Poecilia_reticulata
ENSFHEG00000011854	SRL	99	77.703	ENSPREG00000007751	srl	98	77.477	Poecilia_reticulata
ENSFHEG00000011854	SRL	96	76.047	ENSPPYG00000007053	SRL	100	75.116	Pongo_abelii
ENSFHEG00000011854	SRL	98	76.644	ENSPCAG00000003378	-	50	75.737	Procavia_capensis
ENSFHEG00000011854	SRL	98	76.244	ENSPCOG00000023135	SRL	99	75.581	Propithecus_coquereli
ENSFHEG00000011854	SRL	98	76.697	ENSPVAG00000006586	SRL	65	64.991	Pteropus_vampyrus
ENSFHEG00000011854	SRL	99	77.354	ENSPNYG00000001200	srl	98	77.130	Pundamilia_nyererei
ENSFHEG00000011854	SRL	100	85.281	ENSPNYG00000003423	SRL	99	67.826	Pundamilia_nyererei
ENSFHEG00000011854	SRL	99	78.924	ENSPNAG00000007361	-	92	78.924	Pygocentrus_nattereri
ENSFHEG00000011854	SRL	99	75.446	ENSPNAG00000023106	srl	100	72.727	Pygocentrus_nattereri
ENSFHEG00000011854	SRL	98	76.644	ENSSBOG00000029273	SRL	93	75.566	Saimiri_boliviensis_boliviensis
ENSFHEG00000011854	SRL	99	75.395	ENSSFOG00015021327	SRL	58	72.570	Scleropages_formosus
ENSFHEG00000011854	SRL	99	76.351	ENSSFOG00015009773	srl	100	71.084	Scleropages_formosus
ENSFHEG00000011854	SRL	99	83.514	ENSSMAG00000002232	SRL	100	60.392	Scophthalmus_maximus
ENSFHEG00000011854	SRL	99	76.682	ENSSMAG00000016274	srl	98	76.457	Scophthalmus_maximus
ENSFHEG00000011854	SRL	99	77.354	ENSSDUG00000010808	srl	98	77.130	Seriola_dumerili
ENSFHEG00000011854	SRL	99	85.333	ENSSDUG00000009161	SRL	99	84.667	Seriola_dumerili
ENSFHEG00000011854	SRL	98	85.934	ENSSLDG00000014601	SRL	99	88.377	Seriola_lalandi_dorsalis
ENSFHEG00000011854	SRL	99	77.354	ENSSLDG00000022024	srl	100	73.967	Seriola_lalandi_dorsalis
ENSFHEG00000011854	SRL	99	74.107	ENSSPUG00000016859	SRL	99	74.107	Sphenodon_punctatus
ENSFHEG00000011854	SRL	98	77.149	ENSSPAG00000019105	srl	100	72.634	Stegastes_partitus
ENSFHEG00000011854	SRL	99	86.036	ENSSPAG00000014254	SRL	99	86.036	Stegastes_partitus
ENSFHEG00000011854	SRL	98	76.190	ENSSSCG00000007949	SRL	98	75.283	Sus_scrofa
ENSFHEG00000011854	SRL	79	82.000	ENSTGUG00000016121	-	98	81.461	Taeniopygia_guttata
ENSFHEG00000011854	SRL	99	75.615	ENSTGUG00000003951	-	98	75.615	Taeniopygia_guttata
ENSFHEG00000011854	SRL	93	87.229	ENSTRUG00000013310	SRL	97	59.442	Takifugu_rubripes
ENSFHEG00000011854	SRL	99	77.027	ENSTRUG00000006005	srl	100	73.347	Takifugu_rubripes
ENSFHEG00000011854	SRL	99	76.802	ENSTNIG00000009739	srl	94	76.577	Tetraodon_nigroviridis
ENSFHEG00000011854	SRL	98	76.018	ENSUAMG00000005701	SRL	55	75.737	Ursus_americanus
ENSFHEG00000011854	SRL	98	76.018	ENSUMAG00000002574	SRL	54	75.283	Ursus_maritimus
ENSFHEG00000011854	SRL	98	76.190	ENSVVUG00000016331	-	57	66.979	Vulpes_vulpes
ENSFHEG00000011854	SRL	98	76.471	ENSXETG00000017313	srl	98	76.471	Xenopus_tropicalis
ENSFHEG00000011854	SRL	99	92.584	ENSXCOG00000014584	SRL	99	92.568	Xiphophorus_couchianus
ENSFHEG00000011854	SRL	94	78.860	ENSXCOG00000010424	srl	97	78.622	Xiphophorus_couchianus
ENSFHEG00000011854	SRL	99	77.703	ENSXMAG00000004625	srl	95	74.174	Xiphophorus_maculatus
ENSFHEG00000011854	SRL	97	93.803	ENSXMAG00000027598	SRL	100	80.933	Xiphophorus_maculatus