EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000011922 (Gene tree)
Gene ID: 105928196
Gene Symbol: polr3a
Alias: fb81e09|im:7139382|wu:fb81e09
Full Name: RNA polymerase III subunit A
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 40053 bases
Position: chrKN811321.1:16832-56884
Accession: 105928196
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000028026	RNA_pol_Rpb1_5	PF04998.17	2.1e-88	1	1
ENSFHEP00000028026	RNA_pol_Rpb1_4	PF05000.17	1.8e-31	1	1
ENSFHEP00000028026	RNA_pol_Rpb1_2	PF00623.20	2.9e-73	1	1
ENSFHEP00000028026	RNA_pol_Rpb1_3	PF04983.18	1.9e-12	1	1
ENSFHEP00000028026	RNA_pol_Rpb1_1	PF04997.12	1.2e-93	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000017266	-	3948	XM_021317967	ENSFHEP00000028026	1315 (aa)	XP_021173642	-

Gene Model

Click here to download ENSFHEG00000011922's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000011922's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000011922	polr3a	87	43.704	ENSFHEG00000001768	polr2a	62	43.704
ENSFHEG00000011922	polr3a	87	30.072	ENSFHEG00000005996	polr1a	77	30.072

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000011922	polr3a	99	90.000	ENSG00000148606	POLR3A	98	91.772	Homo_sapiens
ENSFHEG00000011922	polr3a	59	91.336	ENSAPOG00000022727	polr3a	90	91.336	Acanthochromis_polyacanthus
ENSFHEG00000011922	polr3a	98	89.868	ENSAMEG00000017801	POLR3A	92	89.868	Ailuropoda_melanoleuca
ENSFHEG00000011922	polr3a	92	95.672	ENSACIG00000024504	polr3a	91	95.672	Amphilophus_citrinellus
ENSFHEG00000011922	polr3a	99	91.316	ENSAOCG00000003949	-	94	91.316	Amphiprion_ocellaris
ENSFHEG00000011922	polr3a	99	95.526	ENSAOCG00000002071	polr3a	95	95.526	Amphiprion_ocellaris
ENSFHEG00000011922	polr3a	99	95.263	ENSAPEG00000001966	-	95	95.263	Amphiprion_percula
ENSFHEG00000011922	polr3a	99	95.526	ENSAPEG00000013351	polr3a	95	95.526	Amphiprion_percula
ENSFHEG00000011922	polr3a	99	95.526	ENSATEG00000023277	polr3a	95	95.526	Anabas_testudineus
ENSFHEG00000011922	polr3a	98	90.526	ENSAPLG00000015878	POLR3A	94	90.526	Anas_platyrhynchos
ENSFHEG00000011922	polr3a	93	79.679	ENSACAG00000007985	POLR3A	99	79.679	Anolis_carolinensis
ENSFHEG00000011922	polr3a	99	90.000	ENSANAG00000028922	POLR3A	96	92.357	Aotus_nancymaae
ENSFHEG00000011922	polr3a	99	94.868	ENSACLG00000005914	polr3a	95	94.868	Astatotilapia_calliptera
ENSFHEG00000011922	polr3a	94	93.008	ENSAMXG00000018852	polr3a	91	93.008	Astyanax_mexicanus
ENSFHEG00000011922	polr3a	99	90.000	ENSBTAG00000013259	POLR3A	95	90.000	Bos_taurus
ENSFHEG00000011922	polr3a	98	53.123	WBGene00004411	rpc-1	99	53.123	Caenorhabditis_elegans
ENSFHEG00000011922	polr3a	99	89.868	ENSCJAG00000001015	POLR3A	96	91.772	Callithrix_jacchus
ENSFHEG00000011922	polr3a	99	89.868	ENSCAFG00000015546	POLR3A	95	89.868	Canis_familiaris
ENSFHEG00000011922	polr3a	99	89.868	ENSCAFG00020014711	POLR3A	95	89.868	Canis_lupus_dingo
ENSFHEG00000011922	polr3a	99	89.474	ENSCHIG00000000352	POLR3A	95	89.474	Capra_hircus
ENSFHEG00000011922	polr3a	100	81.942	ENSTSYG00000006671	POLR3A	100	81.942	Carlito_syrichta
ENSFHEG00000011922	polr3a	98	90.000	ENSCAPG00000016031	POLR3A	94	90.000	Cavia_aperea
ENSFHEG00000011922	polr3a	99	90.132	ENSCPOG00000022387	POLR3A	95	90.132	Cavia_porcellus
ENSFHEG00000011922	polr3a	99	87.237	ENSCCAG00000032995	POLR3A	96	91.772	Cebus_capucinus
ENSFHEG00000011922	polr3a	99	90.132	ENSCATG00000035842	POLR3A	98	91.772	Cercocebus_atys
ENSFHEG00000011922	polr3a	99	89.737	ENSCLAG00000009629	POLR3A	95	89.737	Chinchilla_lanigera
ENSFHEG00000011922	polr3a	99	90.000	ENSCSAG00000009292	POLR3A	95	90.000	Chlorocebus_sabaeus
ENSFHEG00000011922	polr3a	74	89.261	ENSCHOG00000008368	POLR3A	82	89.261	Choloepus_hoffmanni
ENSFHEG00000011922	polr3a	99	90.777	ENSCPBG00000002079	POLR3A	94	90.777	Chrysemys_picta_bellii
ENSFHEG00000011922	polr3a	99	62.824	ENSCSAVG00000009925	-	99	62.824	Ciona_savignyi
ENSFHEG00000011922	polr3a	84	89.868	ENSCANG00000041071	POLR3A	98	91.139	Colobus_angolensis_palliatus
ENSFHEG00000011922	polr3a	76	91.973	ENSCGRG00001015599	-	86	91.973	Cricetulus_griseus_chok1gshd
ENSFHEG00000011922	polr3a	86	88.041	ENSCGRG00000001019	Polr3a	93	88.041	Cricetulus_griseus_crigri
ENSFHEG00000011922	polr3a	99	95.658	ENSCSEG00000016653	polr3a	95	95.658	Cynoglossus_semilaevis
ENSFHEG00000011922	polr3a	99	96.711	ENSCVAG00000023049	polr3a	95	96.711	Cyprinodon_variegatus
ENSFHEG00000011922	polr3a	99	91.557	ENSDARG00000102569	polr3a	94	91.557	Danio_rerio
ENSFHEG00000011922	polr3a	99	89.079	ENSDNOG00000010194	POLR3A	95	89.079	Dasypus_novemcinctus
ENSFHEG00000011922	polr3a	99	89.605	ENSDORG00000000184	Polr3a	95	89.605	Dipodomys_ordii
ENSFHEG00000011922	polr3a	97	60.531	FBgn0030687	CG17209	92	60.531	Drosophila_melanogaster
ENSFHEG00000011922	polr3a	76	87.854	ENSETEG00000007477	POLR3A	73	87.854	Echinops_telfairi
ENSFHEG00000011922	polr3a	55	80.000	ENSEBUG00000013761	polr3a	86	80.000	Eptatretus_burgeri
ENSFHEG00000011922	polr3a	99	90.000	ENSEASG00005023053	POLR3A	95	90.000	Equus_asinus_asinus
ENSFHEG00000011922	polr3a	95	90.730	ENSECAG00000019416	POLR3A	94	90.730	Equus_caballus
ENSFHEG00000011922	polr3a	93	85.513	ENSEEUG00000001774	POLR3A	91	85.513	Erinaceus_europaeus
ENSFHEG00000011922	polr3a	99	92.237	ENSELUG00000014016	polr3a	95	92.237	Esox_lucius
ENSFHEG00000011922	polr3a	99	90.132	ENSFCAG00000000843	POLR3A	95	90.132	Felis_catus
ENSFHEG00000011922	polr3a	99	90.145	ENSFALG00000006913	POLR3A	95	90.145	Ficedula_albicollis
ENSFHEG00000011922	polr3a	99	89.868	ENSFDAG00000007813	POLR3A	95	89.868	Fukomys_damarensis
ENSFHEG00000011922	polr3a	99	86.715	ENSGMOG00000000291	polr3a	94	86.715	Gadus_morhua
ENSFHEG00000011922	polr3a	99	90.526	ENSGALG00000004947	POLR3A	95	90.526	Gallus_gallus
ENSFHEG00000011922	polr3a	99	96.711	ENSGAFG00000005112	polr3a	95	96.711	Gambusia_affinis
ENSFHEG00000011922	polr3a	99	93.289	ENSGACG00000002304	polr3a	95	93.289	Gasterosteus_aculeatus
ENSFHEG00000011922	polr3a	94	91.292	ENSGAGG00000010386	POLR3A	93	91.292	Gopherus_agassizii
ENSFHEG00000011922	polr3a	98	90.000	ENSGGOG00000027729	POLR3A	98	91.772	Gorilla_gorilla
ENSFHEG00000011922	polr3a	99	95.000	ENSHBUG00000018098	polr3a	95	95.000	Haplochromis_burtoni
ENSFHEG00000011922	polr3a	99	89.737	ENSHGLG00000017899	POLR3A	95	89.737	Heterocephalus_glaber_female
ENSFHEG00000011922	polr3a	99	89.737	ENSHGLG00100008483	POLR3A	95	89.737	Heterocephalus_glaber_male
ENSFHEG00000011922	polr3a	98	93.905	ENSHCOG00000001075	polr3a	92	93.905	Hippocampus_comes
ENSFHEG00000011922	polr3a	99	89.868	ENSSTOG00000012983	POLR3A	95	89.868	Ictidomys_tridecemlineatus
ENSFHEG00000011922	polr3a	99	95.395	ENSKMAG00000015290	polr3a	95	95.395	Kryptolebias_marmoratus
ENSFHEG00000011922	polr3a	99	94.598	ENSLBEG00000017214	polr3a	94	94.598	Labrus_bergylta
ENSFHEG00000011922	polr3a	96	79.480	ENSLACG00000018557	POLR3A	99	79.554	Latimeria_chalumnae
ENSFHEG00000011922	polr3a	98	92.651	ENSLOCG00000004942	polr3a	92	92.651	Lepisosteus_oculatus
ENSFHEG00000011922	polr3a	99	87.385	ENSLAFG00000016719	POLR3A	95	87.385	Loxodonta_africana
ENSFHEG00000011922	polr3a	99	90.000	ENSMFAG00000032218	POLR3A	96	91.772	Macaca_fascicularis
ENSFHEG00000011922	polr3a	99	90.000	ENSMMUG00000005514	POLR3A	98	91.772	Macaca_mulatta
ENSFHEG00000011922	polr3a	99	78.571	ENSMNEG00000035163	POLR3A	92	90.485	Macaca_nemestrina
ENSFHEG00000011922	polr3a	100	81.264	ENSMLEG00000030014	POLR3A	98	91.772	Mandrillus_leucophaeus
ENSFHEG00000011922	polr3a	99	94.868	ENSMAMG00000017497	polr3a	95	94.868	Mastacembelus_armatus
ENSFHEG00000011922	polr3a	99	94.868	ENSMZEG00005000576	polr3a	95	94.868	Maylandia_zebra
ENSFHEG00000011922	polr3a	91	85.028	ENSMGAG00000005713	-	86	85.028	Meleagris_gallopavo
ENSFHEG00000011922	polr3a	99	85.921	ENSMAUG00000016247	Polr3a	94	85.921	Mesocricetus_auratus
ENSFHEG00000011922	polr3a	99	90.132	ENSMICG00000005937	POLR3A	95	90.132	Microcebus_murinus
ENSFHEG00000011922	polr3a	99	90.000	ENSMOCG00000012185	Polr3a	95	90.000	Microtus_ochrogaster
ENSFHEG00000011922	polr3a	100	85.415	ENSMMOG00000013822	polr3a	100	85.415	Mola_mola
ENSFHEG00000011922	polr3a	99	90.000	ENSMODG00000001036	POLR3A	95	90.000	Monodelphis_domestica
ENSFHEG00000011922	polr3a	99	95.658	ENSMALG00000001249	polr3a	95	95.658	Monopterus_albus
ENSFHEG00000011922	polr3a	99	89.737	MGP_CAROLIEiJ_G0019016	Polr3a	95	89.737	Mus_caroli
ENSFHEG00000011922	polr3a	99	89.868	ENSMUSG00000025280	Polr3a	95	89.868	Mus_musculus
ENSFHEG00000011922	polr3a	99	89.737	MGP_PahariEiJ_G0030029	Polr3a	95	89.737	Mus_pahari
ENSFHEG00000011922	polr3a	99	89.605	MGP_SPRETEiJ_G0019894	Polr3a	97	96.040	Mus_spretus
ENSFHEG00000011922	polr3a	99	88.731	ENSMPUG00000003790	POLR3A	95	88.731	Mustela_putorius_furo
ENSFHEG00000011922	polr3a	99	88.158	ENSMLUG00000011522	POLR3A	94	88.158	Myotis_lucifugus
ENSFHEG00000011922	polr3a	99	89.605	ENSNGAG00000015863	Polr3a	94	89.605	Nannospalax_galili
ENSFHEG00000011922	polr3a	99	92.058	ENSNBRG00000014262	polr3a	94	92.058	Neolamprologus_brichardi
ENSFHEG00000011922	polr3a	86	81.447	ENSNLEG00000010501	POLR3A	86	81.447	Nomascus_leucogenys
ENSFHEG00000011922	polr3a	97	78.389	ENSMEUG00000012446	POLR3A	92	78.235	Notamacropus_eugenii
ENSFHEG00000011922	polr3a	99	87.632	ENSOPRG00000001880	-	95	87.632	Ochotona_princeps
ENSFHEG00000011922	polr3a	99	89.474	ENSODEG00000015146	POLR3A	95	89.474	Octodon_degus
ENSFHEG00000011922	polr3a	99	95.263	ENSONIG00000016129	polr3a	95	95.263	Oreochromis_niloticus
ENSFHEG00000011922	polr3a	97	89.737	ENSOANG00000007013	POLR3A	94	89.737	Ornithorhynchus_anatinus
ENSFHEG00000011922	polr3a	99	90.395	ENSOCUG00000012450	POLR3A	95	90.395	Oryctolagus_cuniculus
ENSFHEG00000011922	polr3a	99	95.789	ENSORLG00000008958	polr3a	95	95.789	Oryzias_latipes
ENSFHEG00000011922	polr3a	95	96.067	ENSORLG00020007525	polr3a	93	96.067	Oryzias_latipes_hni
ENSFHEG00000011922	polr3a	99	95.658	ENSORLG00015006633	polr3a	95	95.658	Oryzias_latipes_hsok
ENSFHEG00000011922	polr3a	100	88.397	ENSOMEG00000012865	polr3a	100	88.397	Oryzias_melastigma
ENSFHEG00000011922	polr3a	99	89.737	ENSOGAG00000010995	POLR3A	95	89.737	Otolemur_garnettii
ENSFHEG00000011922	polr3a	99	89.737	ENSOARG00000009656	POLR3A	95	89.737	Ovis_aries
ENSFHEG00000011922	polr3a	99	90.132	ENSPPRG00000002128	POLR3A	95	90.132	Panthera_pardus
ENSFHEG00000011922	polr3a	99	90.132	ENSPTIG00000020916	POLR3A	95	90.132	Panthera_tigris_altaica
ENSFHEG00000011922	polr3a	99	90.000	ENSPTRG00000002664	POLR3A	98	91.772	Pan_troglodytes
ENSFHEG00000011922	polr3a	99	90.000	ENSPANG00000022508	POLR3A	98	91.772	Papio_anubis
ENSFHEG00000011922	polr3a	99	92.632	ENSPKIG00000008140	polr3a	95	92.632	Paramormyrops_kingsleyae
ENSFHEG00000011922	polr3a	97	90.395	ENSPSIG00000002092	POLR3A	94	90.395	Pelodiscus_sinensis
ENSFHEG00000011922	polr3a	99	89.605	ENSPEMG00000006768	Polr3a	95	89.605	Peromyscus_maniculatus_bairdii
ENSFHEG00000011922	polr3a	99	90.132	ENSPCIG00000015842	POLR3A	95	90.132	Phascolarctos_cinereus
ENSFHEG00000011922	polr3a	57	97.450	ENSPFOG00000006458	polr3a	100	97.450	Poecilia_formosa
ENSFHEG00000011922	polr3a	99	96.711	ENSPLAG00000000997	polr3a	95	96.711	Poecilia_latipinna
ENSFHEG00000011922	polr3a	99	96.579	ENSPMEG00000006821	polr3a	95	96.579	Poecilia_mexicana
ENSFHEG00000011922	polr3a	99	96.711	ENSPREG00000002385	polr3a	95	96.711	Poecilia_reticulata
ENSFHEG00000011922	polr3a	91	90.000	ENSPPYG00000002305	POLR3A	94	90.000	Pongo_abelii
ENSFHEG00000011922	polr3a	89	77.863	ENSPCAG00000005690	POLR3A	87	77.863	Procavia_capensis
ENSFHEG00000011922	polr3a	99	90.000	ENSPCOG00000028311	POLR3A	95	90.000	Propithecus_coquereli
ENSFHEG00000011922	polr3a	99	87.500	ENSPVAG00000015553	POLR3A	95	87.500	Pteropus_vampyrus
ENSFHEG00000011922	polr3a	99	94.868	ENSPNYG00000020987	polr3a	95	94.868	Pundamilia_nyererei
ENSFHEG00000011922	polr3a	99	84.587	ENSPNAG00000006629	polr3a	99	84.587	Pygocentrus_nattereri
ENSFHEG00000011922	polr3a	99	89.605	ENSRNOG00000010008	Polr3a	95	89.605	Rattus_norvegicus
ENSFHEG00000011922	polr3a	100	79.884	ENSRBIG00000034967	POLR3A	98	91.772	Rhinopithecus_bieti
ENSFHEG00000011922	polr3a	99	89.868	ENSRROG00000025527	POLR3A	98	91.772	Rhinopithecus_roxellana
ENSFHEG00000011922	polr3a	97	47.866	YOR116C	RPO31	98	47.866	Saccharomyces_cerevisiae
ENSFHEG00000011922	polr3a	99	90.000	ENSSBOG00000022199	POLR3A	95	91.772	Saimiri_boliviensis_boliviensis
ENSFHEG00000011922	polr3a	99	89.737	ENSSHAG00000007588	POLR3A	89	89.737	Sarcophilus_harrisii
ENSFHEG00000011922	polr3a	99	93.158	ENSSFOG00015014357	polr3a	95	93.158	Scleropages_formosus
ENSFHEG00000011922	polr3a	99	94.737	ENSSMAG00000001780	polr3a	95	94.737	Scophthalmus_maximus
ENSFHEG00000011922	polr3a	99	95.921	ENSSDUG00000019840	polr3a	95	95.921	Seriola_dumerili
ENSFHEG00000011922	polr3a	99	95.921	ENSSLDG00000023908	polr3a	95	95.921	Seriola_lalandi_dorsalis
ENSFHEG00000011922	polr3a	66	83.775	ENSSARG00000009916	POLR3A	82	83.775	Sorex_araneus
ENSFHEG00000011922	polr3a	99	86.579	ENSSPUG00000013209	POLR3A	94	86.579	Sphenodon_punctatus
ENSFHEG00000011922	polr3a	99	95.132	ENSSPAG00000017712	polr3a	95	95.132	Stegastes_partitus
ENSFHEG00000011922	polr3a	99	89.605	ENSSSCG00000010327	POLR3A	95	89.605	Sus_scrofa
ENSFHEG00000011922	polr3a	99	90.000	ENSTGUG00000006423	-	95	90.000	Taeniopygia_guttata
ENSFHEG00000011922	polr3a	99	94.737	ENSTRUG00000013488	polr3a	98	92.243	Takifugu_rubripes
ENSFHEG00000011922	polr3a	99	95.132	ENSTNIG00000013151	polr3a	95	95.132	Tetraodon_nigroviridis
ENSFHEG00000011922	polr3a	75	88.298	ENSTBEG00000015288	POLR3A	75	88.298	Tupaia_belangeri
ENSFHEG00000011922	polr3a	100	78.183	ENSTTRG00000007817	POLR3A	100	78.183	Tursiops_truncatus
ENSFHEG00000011922	polr3a	99	85.789	ENSUAMG00000011283	POLR3A	94	87.083	Ursus_americanus
ENSFHEG00000011922	polr3a	99	89.868	ENSUMAG00000013913	POLR3A	95	89.868	Ursus_maritimus
ENSFHEG00000011922	polr3a	98	83.673	ENSVPAG00000003285	POLR3A	94	83.673	Vicugna_pacos
ENSFHEG00000011922	polr3a	99	89.868	ENSVVUG00000025523	POLR3A	95	89.868	Vulpes_vulpes
ENSFHEG00000011922	polr3a	84	91.549	ENSXETG00000018101	polr3a	94	91.549	Xenopus_tropicalis
ENSFHEG00000011922	polr3a	99	96.974	ENSXMAG00000015213	polr3a	95	96.974	Xiphophorus_maculatus