EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000012008 (Gene tree)
Gene ID: 105927485
Gene Symbol: cmss1
Alias: zgc:101814
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 6155 bases
Position: chrKN811310.1:2253026-2259180
Accession: 105927485
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000028111	CMS1	PF14617.6	1.8e-36	1	1
ENSFHEP00000028111	DEAD	PF00270.29	1.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000017475	-	2302	XM_021317424	ENSFHEP00000028111	243 (aa)	XP_021173099	-

Gene Model

Click here to download ENSFHEG00000012008's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000012008's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000012008	cmss1	95	60.173	ENSG00000184220	CMSS1	98	61.250	Homo_sapiens
ENSFHEG00000012008	cmss1	84	85.714	ENSAPOG00000010604	cmss1	91	80.889	Acanthochromis_polyacanthus
ENSFHEG00000012008	cmss1	95	60.776	ENSAMEG00000004092	CMSS1	88	60.776	Ailuropoda_melanoleuca
ENSFHEG00000012008	cmss1	94	71.053	ENSACIG00000021854	cmss1	87	71.121	Amphilophus_citrinellus
ENSFHEG00000012008	cmss1	95	81.034	ENSAOCG00000013361	cmss1	80	82.759	Amphiprion_ocellaris
ENSFHEG00000012008	cmss1	94	80.702	ENSAPEG00000005829	cmss1	80	82.328	Amphiprion_percula
ENSFHEG00000012008	cmss1	94	75.983	ENSATEG00000008209	cmss1	80	78.017	Anabas_testudineus
ENSFHEG00000012008	cmss1	95	58.696	ENSAPLG00000010542	CMSS1	99	56.522	Anas_platyrhynchos
ENSFHEG00000012008	cmss1	95	58.261	ENSACAG00000011065	CMSS1	84	58.261	Anolis_carolinensis
ENSFHEG00000012008	cmss1	95	58.874	ENSANAG00000023565	CMSS1	87	58.874	Aotus_nancymaae
ENSFHEG00000012008	cmss1	94	78.947	ENSACLG00000027294	cmss1	79	78.879	Astatotilapia_calliptera
ENSFHEG00000012008	cmss1	95	60.000	ENSAMXG00000002046	cmss1	79	60.345	Astyanax_mexicanus
ENSFHEG00000012008	cmss1	95	61.472	ENSBTAG00000013663	CMSS1	82	61.472	Bos_taurus
ENSFHEG00000012008	cmss1	95	59.307	ENSCJAG00000000610	CMSS1	87	59.307	Callithrix_jacchus
ENSFHEG00000012008	cmss1	95	61.039	ENSCAFG00000009230	CMSS1	82	61.039	Canis_familiaris
ENSFHEG00000012008	cmss1	83	62.376	ENSCAFG00020024156	-	63	62.376	Canis_lupus_dingo
ENSFHEG00000012008	cmss1	95	61.039	ENSCAFG00020009464	-	83	61.039	Canis_lupus_dingo
ENSFHEG00000012008	cmss1	95	61.472	ENSCHIG00000013003	CMSS1	82	61.472	Capra_hircus
ENSFHEG00000012008	cmss1	95	61.905	ENSTSYG00000009266	CMSS1	87	61.905	Carlito_syrichta
ENSFHEG00000012008	cmss1	86	50.943	ENSCAPG00000013584	CMSS1	88	53.927	Cavia_aperea
ENSFHEG00000012008	cmss1	95	61.472	ENSCPOG00000014680	CMSS1	81	61.472	Cavia_porcellus
ENSFHEG00000012008	cmss1	95	59.740	ENSCCAG00000034685	CMSS1	87	59.740	Cebus_capucinus
ENSFHEG00000012008	cmss1	95	60.606	ENSCATG00000031980	CMSS1	87	60.606	Cercocebus_atys
ENSFHEG00000012008	cmss1	95	60.173	ENSCLAG00000011241	CMSS1	97	60.173	Chinchilla_lanigera
ENSFHEG00000012008	cmss1	95	60.606	ENSCSAG00000006024	CMSS1	93	60.606	Chlorocebus_sabaeus
ENSFHEG00000012008	cmss1	95	45.022	ENSCHOG00000012098	CMSS1	82	45.022	Choloepus_hoffmanni
ENSFHEG00000012008	cmss1	79	43.878	ENSCING00000014848	-	99	44.385	Ciona_intestinalis
ENSFHEG00000012008	cmss1	51	44.444	ENSCSAVG00000002309	-	99	44.444	Ciona_savignyi
ENSFHEG00000012008	cmss1	95	60.606	ENSCANG00000031337	CMSS1	87	60.606	Colobus_angolensis_palliatus
ENSFHEG00000012008	cmss1	83	61.881	ENSCGRG00001014305	Cmss1	81	58.696	Cricetulus_griseus_chok1gshd
ENSFHEG00000012008	cmss1	95	59.130	ENSCGRG00000006722	Cmss1	88	59.130	Cricetulus_griseus_crigri
ENSFHEG00000012008	cmss1	93	74.222	ENSCSEG00000004958	cmss1	77	74.222	Cynoglossus_semilaevis
ENSFHEG00000012008	cmss1	95	86.638	ENSCVAG00000005039	cmss1	81	86.638	Cyprinodon_variegatus
ENSFHEG00000012008	cmss1	95	64.935	ENSDARG00000112579	cmss1	80	64.255	Danio_rerio
ENSFHEG00000012008	cmss1	95	59.307	ENSDNOG00000040418	CMSS1	82	59.307	Dasypus_novemcinctus
ENSFHEG00000012008	cmss1	95	60.606	ENSDORG00000010461	Cmss1	81	60.606	Dipodomys_ordii
ENSFHEG00000012008	cmss1	54	51.515	ENSEBUG00000002156	-	96	51.515	Eptatretus_burgeri
ENSFHEG00000012008	cmss1	95	60.173	ENSEASG00005010966	CMSS1	92	62.871	Equus_asinus_asinus
ENSFHEG00000012008	cmss1	96	58.798	ENSECAG00000015662	CMSS1	99	59.130	Equus_caballus
ENSFHEG00000012008	cmss1	82	44.000	ENSEEUG00000007624	-	81	42.918	Erinaceus_europaeus
ENSFHEG00000012008	cmss1	84	73.892	ENSELUG00000019459	cmss1	76	69.099	Esox_lucius
ENSFHEG00000012008	cmss1	95	62.338	ENSFCAG00000044577	CMSS1	81	62.338	Felis_catus
ENSFHEG00000012008	cmss1	96	57.447	ENSFALG00000005816	CMSS1	95	56.710	Ficedula_albicollis
ENSFHEG00000012008	cmss1	95	61.905	ENSFDAG00000012577	CMSS1	99	61.905	Fukomys_damarensis
ENSFHEG00000012008	cmss1	93	69.778	ENSGMOG00000016729	cmss1	80	69.778	Gadus_morhua
ENSFHEG00000012008	cmss1	95	58.696	ENSGALG00000015267	CMSS1	87	58.009	Gallus_gallus
ENSFHEG00000012008	cmss1	87	86.792	ENSGAFG00000021217	cmss1	77	88.177	Gambusia_affinis
ENSFHEG00000012008	cmss1	84	74.877	ENSGACG00000002798	cmss1	81	72.247	Gasterosteus_aculeatus
ENSFHEG00000012008	cmss1	95	59.130	ENSGAGG00000019861	CMSS1	88	59.130	Gopherus_agassizii
ENSFHEG00000012008	cmss1	95	60.606	ENSGGOG00000014125	CMSS1	87	60.606	Gorilla_gorilla
ENSFHEG00000012008	cmss1	95	78.017	ENSHBUG00000008431	cmss1	82	78.448	Haplochromis_burtoni
ENSFHEG00000012008	cmss1	95	61.039	ENSHGLG00000019481	CMSS1	93	60.173	Heterocephalus_glaber_female
ENSFHEG00000012008	cmss1	95	61.039	ENSHGLG00100010314	CMSS1	91	60.173	Heterocephalus_glaber_male
ENSFHEG00000012008	cmss1	92	72.321	ENSHCOG00000003222	cmss1	76	72.321	Hippocampus_comes
ENSFHEG00000012008	cmss1	96	64.103	ENSIPUG00000011591	cmss1	81	64.103	Ictalurus_punctatus
ENSFHEG00000012008	cmss1	95	59.307	ENSSTOG00000019366	CMSS1	82	59.307	Ictidomys_tridecemlineatus
ENSFHEG00000012008	cmss1	95	61.472	ENSJJAG00000014894	Cmss1	96	60.619	Jaculus_jaculus
ENSFHEG00000012008	cmss1	84	70.936	ENSKMAG00000002390	cmss1	93	66.957	Kryptolebias_marmoratus
ENSFHEG00000012008	cmss1	84	75.980	ENSLBEG00000006298	cmss1	83	75.980	Labrus_bergylta
ENSFHEG00000012008	cmss1	83	63.861	ENSLACG00000009293	CMSS1	99	59.740	Latimeria_chalumnae
ENSFHEG00000012008	cmss1	95	56.087	ENSLOCG00000009391	cmss1	80	55.411	Lepisosteus_oculatus
ENSFHEG00000012008	cmss1	95	59.740	ENSLAFG00000017509	CMSS1	99	59.740	Loxodonta_africana
ENSFHEG00000012008	cmss1	95	60.173	ENSMFAG00000045006	CMSS1	87	60.173	Macaca_fascicularis
ENSFHEG00000012008	cmss1	95	59.740	ENSMMUG00000002939	CMSS1	96	60.181	Macaca_mulatta
ENSFHEG00000012008	cmss1	95	60.173	ENSMNEG00000031315	CMSS1	87	60.173	Macaca_nemestrina
ENSFHEG00000012008	cmss1	95	60.173	ENSMLEG00000033660	CMSS1	87	60.173	Mandrillus_leucophaeus
ENSFHEG00000012008	cmss1	95	80.172	ENSMAMG00000017176	cmss1	80	81.034	Mastacembelus_armatus
ENSFHEG00000012008	cmss1	94	78.947	ENSMZEG00005021886	cmss1	79	78.879	Maylandia_zebra
ENSFHEG00000012008	cmss1	83	61.881	ENSMGAG00000014360	CMSS1	89	61.881	Meleagris_gallopavo
ENSFHEG00000012008	cmss1	95	43.043	ENSMAUG00000020609	Cmss1	77	43.043	Mesocricetus_auratus
ENSFHEG00000012008	cmss1	95	61.039	ENSMICG00000048977	CMSS1	87	61.039	Microcebus_murinus
ENSFHEG00000012008	cmss1	95	58.696	ENSMOCG00000021937	Cmss1	82	58.696	Microtus_ochrogaster
ENSFHEG00000012008	cmss1	84	77.833	ENSMMOG00000019794	cmss1	93	70.085	Mola_mola
ENSFHEG00000012008	cmss1	95	59.307	ENSMODG00000002275	CMSS1	86	59.307	Monodelphis_domestica
ENSFHEG00000012008	cmss1	95	79.741	ENSMALG00000004250	cmss1	79	79.741	Monopterus_albus
ENSFHEG00000012008	cmss1	95	60.870	MGP_CAROLIEiJ_G0020824	Cmss1	82	59.565	Mus_caroli
ENSFHEG00000012008	cmss1	95	60.870	ENSMUSG00000022748	Cmss1	82	59.565	Mus_musculus
ENSFHEG00000012008	cmss1	95	60.870	MGP_PahariEiJ_G0016524	Cmss1	82	59.565	Mus_pahari
ENSFHEG00000012008	cmss1	95	60.870	MGP_SPRETEiJ_G0021724	Cmss1	82	59.565	Mus_spretus
ENSFHEG00000012008	cmss1	95	61.304	ENSMPUG00000011324	CMSS1	87	61.304	Mustela_putorius_furo
ENSFHEG00000012008	cmss1	95	60.345	ENSMLUG00000001131	CMSS1	87	60.345	Myotis_lucifugus
ENSFHEG00000012008	cmss1	95	60.000	ENSNGAG00000020316	Cmss1	81	60.000	Nannospalax_galili
ENSFHEG00000012008	cmss1	94	78.509	ENSNBRG00000003095	cmss1	79	78.879	Neolamprologus_brichardi
ENSFHEG00000012008	cmss1	95	60.606	ENSNLEG00000034172	CMSS1	87	60.606	Nomascus_leucogenys
ENSFHEG00000012008	cmss1	95	50.216	ENSMEUG00000014505	CMSS1	99	50.649	Notamacropus_eugenii
ENSFHEG00000012008	cmss1	95	60.606	ENSOPRG00000002986	CMSS1	82	60.606	Ochotona_princeps
ENSFHEG00000012008	cmss1	95	52.814	ENSODEG00000001853	-	81	52.814	Octodon_degus
ENSFHEG00000012008	cmss1	94	53.509	ENSODEG00000009446	-	88	53.509	Octodon_degus
ENSFHEG00000012008	cmss1	95	59.307	ENSODEG00000003558	-	84	59.307	Octodon_degus
ENSFHEG00000012008	cmss1	95	60.606	ENSODEG00000005226	-	81	60.606	Octodon_degus
ENSFHEG00000012008	cmss1	94	78.947	ENSONIG00000006678	cmss1	89	78.879	Oreochromis_niloticus
ENSFHEG00000012008	cmss1	95	59.740	ENSOANG00000007529	CMSS1	99	58.009	Ornithorhynchus_anatinus
ENSFHEG00000012008	cmss1	95	61.039	ENSOCUG00000025366	CMSS1	82	61.039	Oryctolagus_cuniculus
ENSFHEG00000012008	cmss1	95	79.310	ENSORLG00000020340	cmss1	80	79.310	Oryzias_latipes
ENSFHEG00000012008	cmss1	90	70.776	ENSORLG00020012235	cmss1	93	70.776	Oryzias_latipes_hni
ENSFHEG00000012008	cmss1	84	72.414	ENSORLG00015015551	cmss1	76	72.414	Oryzias_latipes_hsok
ENSFHEG00000012008	cmss1	95	78.448	ENSOMEG00000012555	cmss1	79	78.879	Oryzias_melastigma
ENSFHEG00000012008	cmss1	95	60.606	ENSOGAG00000002045	CMSS1	99	60.606	Otolemur_garnettii
ENSFHEG00000012008	cmss1	96	61.111	ENSOARG00000017899	CMSS1	79	61.111	Ovis_aries
ENSFHEG00000012008	cmss1	95	60.606	ENSPPAG00000038515	CMSS1	83	60.606	Pan_paniscus
ENSFHEG00000012008	cmss1	95	62.338	ENSPPRG00000016767	CMSS1	81	62.338	Panthera_pardus
ENSFHEG00000012008	cmss1	95	61.905	ENSPTIG00000018274	CMSS1	81	61.905	Panthera_tigris_altaica
ENSFHEG00000012008	cmss1	95	60.606	ENSPTRG00000015157	CMSS1	93	60.606	Pan_troglodytes
ENSFHEG00000012008	cmss1	95	60.606	ENSPANG00000019980	CMSS1	90	60.606	Papio_anubis
ENSFHEG00000012008	cmss1	95	65.217	ENSPKIG00000012609	cmss1	86	65.086	Paramormyrops_kingsleyae
ENSFHEG00000012008	cmss1	95	58.696	ENSPSIG00000003849	CMSS1	99	58.696	Pelodiscus_sinensis
ENSFHEG00000012008	cmss1	92	71.739	ENSPMGG00000010286	cmss1	99	73.799	Periophthalmus_magnuspinnatus
ENSFHEG00000012008	cmss1	95	60.870	ENSPEMG00000016384	Cmss1	81	60.870	Peromyscus_maniculatus_bairdii
ENSFHEG00000012008	cmss1	84	51.961	ENSPMAG00000001146	cmss1	99	52.217	Petromyzon_marinus
ENSFHEG00000012008	cmss1	95	58.009	ENSPCIG00000015656	CMSS1	86	57.759	Phascolarctos_cinereus
ENSFHEG00000012008	cmss1	94	86.900	ENSPFOG00000016849	cmss1	81	86.638	Poecilia_formosa
ENSFHEG00000012008	cmss1	94	86.463	ENSPLAG00000008323	cmss1	81	86.207	Poecilia_latipinna
ENSFHEG00000012008	cmss1	94	86.900	ENSPMEG00000021020	cmss1	81	86.638	Poecilia_mexicana
ENSFHEG00000012008	cmss1	95	85.776	ENSPREG00000007618	cmss1	79	85.776	Poecilia_reticulata
ENSFHEG00000012008	cmss1	95	60.606	ENSPPYG00000013606	CMSS1	83	60.606	Pongo_abelii
ENSFHEG00000012008	cmss1	95	61.472	ENSPCOG00000020035	CMSS1	87	61.472	Propithecus_coquereli
ENSFHEG00000012008	cmss1	95	51.515	ENSPVAG00000017031	CMSS1	81	51.515	Pteropus_vampyrus
ENSFHEG00000012008	cmss1	83	78.218	ENSPNYG00000013428	cmss1	75	78.155	Pundamilia_nyererei
ENSFHEG00000012008	cmss1	96	64.530	ENSPNAG00000007912	cmss1	80	64.530	Pygocentrus_nattereri
ENSFHEG00000012008	cmss1	95	60.870	ENSRNOG00000027888	Cmss1	88	59.565	Rattus_norvegicus
ENSFHEG00000012008	cmss1	95	60.173	ENSRBIG00000037931	CMSS1	87	60.173	Rhinopithecus_bieti
ENSFHEG00000012008	cmss1	95	60.173	ENSRROG00000042910	CMSS1	87	60.173	Rhinopithecus_roxellana
ENSFHEG00000012008	cmss1	96	56.098	ENSSBOG00000030980	CMSS1	87	59.740	Saimiri_boliviensis_boliviensis
ENSFHEG00000012008	cmss1	83	63.366	ENSSHAG00000009321	CMSS1	90	59.740	Sarcophilus_harrisii
ENSFHEG00000012008	cmss1	95	70.870	ENSSFOG00015001509	cmss1	80	70.690	Scleropages_formosus
ENSFHEG00000012008	cmss1	93	80.088	ENSSMAG00000001653	cmss1	78	79.386	Scophthalmus_maximus
ENSFHEG00000012008	cmss1	95	81.466	ENSSDUG00000007719	cmss1	80	82.328	Seriola_dumerili
ENSFHEG00000012008	cmss1	85	84.541	ENSSLDG00000012300	cmss1	72	81.143	Seriola_lalandi_dorsalis
ENSFHEG00000012008	cmss1	95	48.918	ENSSARG00000003584	CMSS1	81	48.918	Sorex_araneus
ENSFHEG00000012008	cmss1	95	55.652	ENSSPUG00000003865	CMSS1	100	56.522	Sphenodon_punctatus
ENSFHEG00000012008	cmss1	85	85.437	ENSSPAG00000019182	cmss1	63	85.222	Stegastes_partitus
ENSFHEG00000012008	cmss1	95	60.606	ENSSSCG00000011970	CMSS1	81	60.606	Sus_scrofa
ENSFHEG00000012008	cmss1	95	55.652	ENSTGUG00000013635	CMSS1	99	55.217	Taeniopygia_guttata
ENSFHEG00000012008	cmss1	84	76.847	ENSTRUG00000015265	cmss1	82	72.845	Takifugu_rubripes
ENSFHEG00000012008	cmss1	84	70.936	ENSTNIG00000002880	cmss1	83	67.965	Tetraodon_nigroviridis
ENSFHEG00000012008	cmss1	95	45.652	ENSTBEG00000016722	CMSS1	81	45.652	Tupaia_belangeri
ENSFHEG00000012008	cmss1	95	60.173	ENSTTRG00000001562	CMSS1	81	60.173	Tursiops_truncatus
ENSFHEG00000012008	cmss1	95	61.472	ENSUAMG00000024209	CMSS1	95	61.472	Ursus_americanus
ENSFHEG00000012008	cmss1	95	61.039	ENSUMAG00000001983	CMSS1	88	61.039	Ursus_maritimus
ENSFHEG00000012008	cmss1	66	62.500	ENSVPAG00000000263	CMSS1	57	62.500	Vicugna_pacos
ENSFHEG00000012008	cmss1	83	63.366	ENSVVUG00000007776	-	80	63.366	Vulpes_vulpes
ENSFHEG00000012008	cmss1	95	60.606	ENSVVUG00000021647	-	92	60.606	Vulpes_vulpes
ENSFHEG00000012008	cmss1	84	61.084	ENSXETG00000011858	cmss1	73	61.084	Xenopus_tropicalis
ENSFHEG00000012008	cmss1	86	88.462	ENSXCOG00000018724	cmss1	70	88.670	Xiphophorus_couchianus
ENSFHEG00000012008	cmss1	86	88.462	ENSXMAG00000011243	cmss1	76	88.670	Xiphophorus_maculatus